RNA–Protein interactions for RNA: ENST00000492859.5

BRCA1-220, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,584 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-220ENST00000492859 ZNF264O43296 627 aa4.16□□□□□ -1.74
BRCA1-220ENST00000492859 SUV39H1O43463 412 aa4.16□□□□□ -1.74
BRCA1-220ENST00000492859 DCXO43602 365 aa4.16□□□□□ -1.74
BRCA1-220ENST00000492859 AKAP8O43823 692 aaKnown RBP4.16□□□□□ -1.74
BRCA1-220ENST00000492859 KLK8O60259 260 aa4.16□□□□□ -1.74
BRCA1-220ENST00000492859 CDH16O75309 829 aa4.16□□□□□ -1.74
BRCA1-220ENST00000492859 SNNO75324 88 aaPredicted RBP4.16□□□□□ -1.74
BRCA1-220ENST00000492859 SERPINI2O75830 405 aa4.16□□□□□ -1.74
BRCA1-220ENST00000492859 SMNDC1O75940 238 aaKnown RBP eCLIP4.16□□□□□ -1.74
BRCA1-220ENST00000492859 DHFRP00374 187 aa4.16□□□□□ -1.74
BRCA1-220ENST00000492859 LCATP04180 440 aa4.16□□□□□ -1.74
BRCA1-220ENST00000492859 LPLP06858 475 aa4.16□□□□□ -1.74
BRCA1-220ENST00000492859 SERPINA6P08185 405 aa4.16□□□□□ -1.74
BRCA1-220ENST00000492859 C8orf89P0DMQ9 161 aa4.16□□□□□ -1.74
BRCA1-220ENST00000492859 ICAM2P13598 275 aa4.16□□□□□ -1.74
BRCA1-220ENST00000492859 LCP1P13796 627 aa4.16□□□□□ -1.74
BRCA1-220ENST00000492859 PLS3P13797 630 aa4.16□□□□□ -1.74
BRCA1-220ENST00000492859 RPA2P15927 270 aa4.16□□□□□ -1.74
BRCA1-220ENST00000492859 ITIH1P19827 911 aa4.16□□□□□ -1.74
BRCA1-220ENST00000492859 DDCP20711 480 aa4.16□□□□□ -1.74
BRCA1-220ENST00000492859 PRPS1L1P21108 318 aa4.16□□□□□ -1.74
BRCA1-220ENST00000492859 MSR1P21757 451 aa4.16□□□□□ -1.74
BRCA1-220ENST00000492859 KLRK1P26718 216 aa4.16□□□□□ -1.74
BRCA1-220ENST00000492859 THBS2P35442 1172 aa4.16□□□□□ -1.74
BRCA1-220ENST00000492859 MSX2P35548 267 aaPredicted RBP4.16□□□□□ -1.74
BRCA1-220ENST00000492859 SOAT1P35610 550 aa4.16□□□□□ -1.74
BRCA1-220ENST00000492859 FEN1P39748 380 aaKnown RBP4.16□□□□□ -1.74
BRCA1-220ENST00000492859 ACADVLP49748 655 aa4.16□□□□□ -1.74
BRCA1-220ENST00000492859 FLT3LGP49771 235 aa4.16□□□□□ -1.74
BRCA1-220ENST00000492859 HNRNPFP52597 415 aaKnown RBP4.16□□□□□ -1.74
BRCA1-220ENST00000492859 MANFP55145 182 aaKnown RBP4.16□□□□□ -1.74
BRCA1-220ENST00000492859 PEX3P56589 373 aa4.16□□□□□ -1.74
BRCA1-220ENST00000492859 UBE2G2P60604 165 aa4.16□□□□□ -1.74
BRCA1-220ENST00000492859 RPL7AP62424 266 aaKnown RBP4.16□□□□□ -1.74
BRCA1-220ENST00000492859 YBX1P67809 324 aaKnown RBP4.16□□□□□ -1.74
BRCA1-220ENST00000492859 ATP11AP98196 1134 aa4.16□□□□□ -1.74
BRCA1-220ENST00000492859 B4GALNT1Q00973 533 aa4.16□□□□□ -1.74
BRCA1-220ENST00000492859 SPOCK1Q08629 439 aa4.16□□□□□ -1.74
BRCA1-220ENST00000492859 BST1Q10588 318 aa4.16□□□□□ -1.74
BRCA1-220ENST00000492859 ENPP2Q13822 863 aa4.16□□□□□ -1.74
BRCA1-220ENST00000492859 UBAP2LQ14157 1087 aaKnown RBP4.16□□□□□ -1.74
BRCA1-220ENST00000492859 MVPQ14764 893 aaKnown RBP4.16□□□□□ -1.74
BRCA1-220ENST00000492859 PDK4Q16654 411 aa4.16□□□□□ -1.74
BRCA1-220ENST00000492859 BTBD16Q32M84 506 aa4.16□□□□□ -1.74
BRCA1-220ENST00000492859 NRN1LQ496H8 165 aa4.16□□□□□ -1.74
BRCA1-220ENST00000492859 PITRM1Q5JRX3 1037 aa4.16□□□□□ -1.74
BRCA1-220ENST00000492859 DDX59Q5T1V6 619 aaKnown RBP eCLIP4.16□□□□□ -1.74
BRCA1-220ENST00000492859 LIPNQ5VXI9 398 aa4.16□□□□□ -1.74
BRCA1-220ENST00000492859 RNLSQ5VYX0 342 aa4.16□□□□□ -1.74
BRCA1-220ENST00000492859 FAM109BQ6ICB4 259 aaPredicted RBP4.16□□□□□ -1.74
BRCA1-220ENST00000492859 KIAA1841Q6NSI8 718 aa4.16□□□□□ -1.74
BRCA1-220ENST00000492859 TMEM214Q6NUQ4 689 aaKnown RBP4.16□□□□□ -1.74
BRCA1-220ENST00000492859 C3orf33Q6P1S2 294 aa4.16□□□□□ -1.74
BRCA1-220ENST00000492859 ARSKQ6UWY0 536 aa4.16□□□□□ -1.74
BRCA1-220ENST00000492859 VITQ6UXI7 678 aa4.16□□□□□ -1.74
BRCA1-220ENST00000492859 ZPBP2Q6X784 338 aa4.16□□□□□ -1.74
BRCA1-220ENST00000492859 GPRIN3Q6ZVF9 776 aa4.16□□□□□ -1.74
BRCA1-220ENST00000492859 VTCN1Q7Z7D3 282 aa4.16□□□□□ -1.74
BRCA1-220ENST00000492859 LINC00523Q86TU6 105 aa4.16□□□□□ -1.74
BRCA1-220ENST00000492859 TICAM1Q8IUC6 712 aa4.16□□□□□ -1.74
BRCA1-220ENST00000492859 DCP1BQ8IZD4 617 aaKnown RBP4.16□□□□□ -1.74
BRCA1-220ENST00000492859 ZNF786Q8N393 782 aa4.16□□□□□ -1.74
BRCA1-220ENST00000492859 ZBTB2Q8N680 514 aa4.16□□□□□ -1.74
BRCA1-220ENST00000492859 DTX3Q8N9I9 347 aa4.16□□□□□ -1.74
BRCA1-220ENST00000492859 UXS1Q8NBZ7 420 aa4.16□□□□□ -1.74
BRCA1-220ENST00000492859 RNF169Q8NCN4 708 aa4.16□□□□□ -1.74
BRCA1-220ENST00000492859 OR2L3Q8NG85 312 aa4.16□□□□□ -1.74
BRCA1-220ENST00000492859 OR10T2Q8NGX3 314 aa4.16□□□□□ -1.74
BRCA1-220ENST00000492859 DTX3LQ8TDB6 740 aa4.16□□□□□ -1.74
BRCA1-220ENST00000492859 NSMCE1Q8WV22 266 aa4.16□□□□□ -1.74
BRCA1-220ENST00000492859 CACNG8Q8WXS5 425 aa4.16□□□□□ -1.74
BRCA1-220ENST00000492859 PHYHIPQ92561 330 aa4.16□□□□□ -1.74
BRCA1-220ENST00000492859 HAVCR1Q96D42 359 aa4.16□□□□□ -1.74
BRCA1-220ENST00000492859 ARHGEF26Q96DR7 871 aa4.16□□□□□ -1.74
BRCA1-220ENST00000492859 ELP4Q96EB1 424 aa4.16□□□□□ -1.74
BRCA1-220ENST00000492859 EEF2KMTQ96G04 330 aa4.16□□□□□ -1.74
BRCA1-220ENST00000492859 XAGE2Q96GT9 111 aa4.16□□□□□ -1.74
BRCA1-220ENST00000492859 SLC41A3Q96GZ6 507 aa4.16□□□□□ -1.74
BRCA1-220ENST00000492859 PRR11Q96HE9 360 aaPredicted RBP4.16□□□□□ -1.74
BRCA1-220ENST00000492859 RCC1LQ96I51 464 aaKnown RBP4.16□□□□□ -1.74
BRCA1-220ENST00000492859 PRRC1Q96M27 445 aa4.16□□□□□ -1.74
BRCA1-220ENST00000492859 VPS35Q96QK1 796 aa4.16□□□□□ -1.74
BRCA1-220ENST00000492859 CYP2S1Q96SQ9 504 aa4.16□□□□□ -1.74
BRCA1-220ENST00000492859 PIGQQ9BRB3 760 aa4.16□□□□□ -1.74
BRCA1-220ENST00000492859 SH2D3AQ9BRG2 576 aa4.16□□□□□ -1.74
BRCA1-220ENST00000492859 SRSF8Q9BRL6 282 aaKnown RBP4.16□□□□□ -1.74
BRCA1-220ENST00000492859 OSBPL6Q9BZF3 934 aa4.16□□□□□ -1.74
BRCA1-220ENST00000492859 BCL2L14Q9BZR8 327 aa4.16□□□□□ -1.74
BRCA1-220ENST00000492859 DDX47Q9H0S4 455 aaKnown RBP4.16□□□□□ -1.74
BRCA1-220ENST00000492859 SLC6A17Q9H1V8 727 aa4.16□□□□□ -1.74
BRCA1-220ENST00000492859 KCNN2Q9H2S1 579 aa4.16□□□□□ -1.74
BRCA1-220ENST00000492859 NKX2-4Q9H2Z4 354 aa4.16□□□□□ -1.74
BRCA1-220ENST00000492859 SOX17Q9H6I2 414 aaPredicted RBP4.16□□□□□ -1.74
BRCA1-220ENST00000492859 AUNIPQ9H7T9 357 aa4.16□□□□□ -1.74
BRCA1-220ENST00000492859 FN3KRPQ9HA64 309 aa4.16□□□□□ -1.74
BRCA1-220ENST00000492859 PLEKHA2Q9HB19 425 aa4.16□□□□□ -1.74
BRCA1-220ENST00000492859 CBX8Q9HC52 389 aa4.16□□□□□ -1.74
BRCA1-220ENST00000492859 SLC39A2Q9NP94 309 aa4.16□□□□□ -1.74
BRCA1-220ENST00000492859 ZDHHC4Q9NPG8 344 aa4.16□□□□□ -1.74
BRCA1-220ENST00000492859 CNNM1Q9NRU3 951 aa4.16□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms