RNA–Protein interactions for RNA: ENST00000490800.1

CLDN1-202, Transcript of claudin 1, humanhuman

TSL 2

Gene CLDN1, Length 432 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN1-202ENST00000490800 CA4P22748 312 aa7.5□□□□□ -1.21
CLDN1-202ENST00000490800 ACP1P24666 158 aa7.5□□□□□ -1.21
CLDN1-202ENST00000490800 ARNTP27540 789 aa7.5□□□□□ -1.21
CLDN1-202ENST00000490800 HNF1BP35680 557 aa7.5□□□□□ -1.21
CLDN1-202ENST00000490800 ARCN1P48444 511 aaKnown RBP7.5□□□□□ -1.21
CLDN1-202ENST00000490800 MAGOHP61326 146 aaKnown RBP7.5□□□□□ -1.21
CLDN1-202ENST00000490800 SEMG2Q02383 582 aa7.5□□□□□ -1.21
CLDN1-202ENST00000490800 SRSF11Q05519 484 aaKnown RBP7.5□□□□□ -1.21
CLDN1-202ENST00000490800 BCL2L1Q07817 233 aa7.5□□□□□ -1.21
CLDN1-202ENST00000490800 ILKQ13418 452 aa7.5□□□□□ -1.21
CLDN1-202ENST00000490800 NAB1Q13506 487 aa7.5□□□□□ -1.21
CLDN1-202ENST00000490800 FZD2Q14332 565 aa7.5□□□□□ -1.21
CLDN1-202ENST00000490800 CNGA3Q16281 694 aa7.5□□□□□ -1.21
CLDN1-202ENST00000490800 SKIDA1Q1XH10 827 aa7.5□□□□□ -1.21
CLDN1-202ENST00000490800 ELOA3BQ3SY89 546 aa7.5□□□□□ -1.21
CLDN1-202ENST00000490800 ZNF805Q5CZA5 627 aa7.5□□□□□ -1.21
CLDN1-202ENST00000490800 TPRG1LQ5T0D9 272 aa7.5□□□□□ -1.21
CLDN1-202ENST00000490800 TSTD2Q5T7W7 516 aa7.5□□□□□ -1.21
CLDN1-202ENST00000490800 ARMC12Q5T9G4 340 aa7.5□□□□□ -1.21
CLDN1-202ENST00000490800 KIAA0930Q6ICG6 404 aaPredicted RBP7.5□□□□□ -1.21
CLDN1-202ENST00000490800 KIAA1161Q6NSJ0 714 aa7.5□□□□□ -1.21
CLDN1-202ENST00000490800 GDPD4Q6W3E5 623 aa7.5□□□□□ -1.21
CLDN1-202ENST00000490800 KDM7AQ6ZMT4 941 aa7.5□□□□□ -1.21
CLDN1-202ENST00000490800 SLCO4C1Q6ZQN7 724 aa7.5□□□□□ -1.21
CLDN1-202ENST00000490800 MICALCLQ6ZW33 695 aa7.5□□□□□ -1.21
CLDN1-202ENST00000490800 MARK2Q7KZI7 788 aaKnown RBP7.5□□□□□ -1.21
CLDN1-202ENST00000490800 NLRP9Q7RTR0 991 aa7.5□□□□□ -1.21
CLDN1-202ENST00000490800 PTAR1Q7Z6K3 402 aaPredicted RBP7.5□□□□□ -1.21
CLDN1-202ENST00000490800 PDZD3Q86UT5 571 aa7.5□□□□□ -1.21
CLDN1-202ENST00000490800 KCNMB4Q86W47 210 aa7.5□□□□□ -1.21
CLDN1-202ENST00000490800 SLC26A11Q86WA9 606 aa7.5□□□□□ -1.21
CLDN1-202ENST00000490800 LRRC6Q86X45 466 aa7.5□□□□□ -1.21
CLDN1-202ENST00000490800 DCP2Q8IU60 420 aaKnown RBP7.5□□□□□ -1.21
CLDN1-202ENST00000490800 CTAGE3PQ8IX95 158 aa7.5□□□□□ -1.21
CLDN1-202ENST00000490800 LPCAT1Q8NF37 534 aa7.5□□□□□ -1.21
CLDN1-202ENST00000490800 ELOA3Q8NG57 546 aa7.5□□□□□ -1.21
CLDN1-202ENST00000490800 OR4C6Q8NH72 309 aa7.5□□□□□ -1.21
CLDN1-202ENST00000490800 BRSK1Q8TDC3 778 aa7.5□□□□□ -1.21
CLDN1-202ENST00000490800 BLOC1S5Q8TDH9 187 aa7.5□□□□□ -1.21
CLDN1-202ENST00000490800 PDCD6IPQ8WUM4 868 aaKnown RBP7.5□□□□□ -1.21
CLDN1-202ENST00000490800 PIH1D2Q8WWB5 315 aa7.5□□□□□ -1.21
CLDN1-202ENST00000490800 CERS2Q96G23 380 aa7.5□□□□□ -1.21
CLDN1-202ENST00000490800 LRIG1Q96JA1 1093 aa7.5□□□□□ -1.21
CLDN1-202ENST00000490800 LENG8Q96PV6 779 aaPredicted RBP7.5□□□□□ -1.21
CLDN1-202ENST00000490800 TUBGCP5Q96RT8 1024 aa7.5□□□□□ -1.21
CLDN1-202ENST00000490800 KLF6Q99612 283 aaPredicted RBP7.5□□□□□ -1.21
CLDN1-202ENST00000490800 ADGRE3Q9BY15 652 aa7.5□□□□□ -1.21
CLDN1-202ENST00000490800 CPEB1Q9BZB8 566 aaKnown RBP7.5□□□□□ -1.21
CLDN1-202ENST00000490800 ATP13A3Q9H7F0 1226 aa7.5□□□□□ -1.21
CLDN1-202ENST00000490800 C20orf96Q9NUD7 363 aaPredicted RBP7.5□□□□□ -1.21
CLDN1-202ENST00000490800 DNAJC28Q9NX36 388 aa7.5□□□□□ -1.21
CLDN1-202ENST00000490800 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP7.5□□□□□ -1.21
CLDN1-202ENST00000490800 TBK1Q9UHD2 729 aa7.5□□□□□ -1.21
CLDN1-202ENST00000490800 GGT7Q9UJ14 662 aa7.5□□□□□ -1.21
CLDN1-202ENST00000490800 GDF2Q9UK05 429 aaPredicted RBP7.5□□□□□ -1.21
CLDN1-202ENST00000490800 RIMKLBQ9ULI2 386 aa7.5□□□□□ -1.21
CLDN1-202ENST00000490800 ITM2BQ9Y287 266 aa7.5□□□□□ -1.21
CLDN1-202ENST00000490800 KCTD3Q9Y597 815 aa7.5□□□□□ -1.21
CLDN1-202ENST00000490800 NBEAQ8NFP9 2946 aa7.5□□□□□ -1.21
CLDN1-202ENST00000490800 DOCK9Q9BZ29 2069 aa7.5□□□□□ -1.21
CLDN1-202ENST00000490800 GOLGA4Q13439 2230 aaKnown RBP7.5□□□□□ -1.21
CLDN1-202ENST00000490800 SPTY2D1-AS1A0A0U1RR47 76 aa7.49□□□□□ -1.21
CLDN1-202ENST00000490800 NEMP2A6NFY4 417 aa7.49□□□□□ -1.21
CLDN1-202ENST00000490800 K7ESM1 405 aa7.49□□□□□ -1.21
CLDN1-202ENST00000490800 AURKAO14965 403 aa7.49□□□□□ -1.21
CLDN1-202ENST00000490800 SCAMP1O15126 338 aa7.49□□□□□ -1.21
CLDN1-202ENST00000490800 FBXO24O75426 580 aa7.49□□□□□ -1.21
CLDN1-202ENST00000490800 MT-CO3P00414 261 aa7.49□□□□□ -1.21
CLDN1-202ENST00000490800 INHBAP08476 426 aa7.49□□□□□ -1.21
CLDN1-202ENST00000490800 CTPS1P17812 591 aa7.49□□□□□ -1.21
CLDN1-202ENST00000490800 PSMA3P25788 255 aa7.49□□□□□ -1.21
CLDN1-202ENST00000490800 SERPINA4P29622 427 aa7.49□□□□□ -1.21
CLDN1-202ENST00000490800 ZNF140P52738 457 aaPredicted RBP7.49□□□□□ -1.21
CLDN1-202ENST00000490800 RPL26P61254 145 aaKnown RBP7.49□□□□□ -1.21
CLDN1-202ENST00000490800 E2F1Q01094 437 aa7.49□□□□□ -1.21
CLDN1-202ENST00000490800 INSM1Q01101 510 aaPredicted RBP7.49□□□□□ -1.21
CLDN1-202ENST00000490800 ACVR1Q04771 509 aa7.49□□□□□ -1.21
CLDN1-202ENST00000490800 LAMB3Q13751 1172 aa7.49□□□□□ -1.21
CLDN1-202ENST00000490800 PDE1CQ14123 709 aaPredicted RBP7.49□□□□□ -1.21
CLDN1-202ENST00000490800 PTPRCAPQ14761 206 aa7.49□□□□□ -1.21
CLDN1-202ENST00000490800 PTPRRQ15256 657 aa7.49□□□□□ -1.21
CLDN1-202ENST00000490800 SPRED3Q2MJR0 410 aa7.49□□□□□ -1.21
CLDN1-202ENST00000490800 HSP90AA5PQ58FG0 334 aa7.49□□□□□ -1.21
CLDN1-202ENST00000490800 LRRC73Q5JTD7 316 aa7.49□□□□□ -1.21
CLDN1-202ENST00000490800 TEDDM1Q5T9Z0 273 aa7.49□□□□□ -1.21
CLDN1-202ENST00000490800 PDPK2PQ6A1A2 396 aa7.49□□□□□ -1.21
CLDN1-202ENST00000490800 KYAT3Q6YP21 454 aaKnown RBP7.49□□□□□ -1.21
CLDN1-202ENST00000490800 TRABD2AQ86V40 505 aa7.49□□□□□ -1.21
CLDN1-202ENST00000490800 EXOC3L1Q86VI1 746 aa7.49□□□□□ -1.21
CLDN1-202ENST00000490800 ZSWIM9Q86XI8 627 aa7.49□□□□□ -1.21
CLDN1-202ENST00000490800 CNTN4Q8IWV2 1026 aa7.49□□□□□ -1.21
CLDN1-202ENST00000490800 TTC30BQ8N4P2 665 aa7.49□□□□□ -1.21
CLDN1-202ENST00000490800 TMEM102Q8N9M5 508 aaPredicted RBP7.49□□□□□ -1.21
CLDN1-202ENST00000490800 OR13J1Q8NGT2 312 aa7.49□□□□□ -1.21
CLDN1-202ENST00000490800 MZB1Q8WU39 189 aa7.49□□□□□ -1.21
CLDN1-202ENST00000490800 NUDT8Q8WV74 236 aa7.49□□□□□ -1.21
CLDN1-202ENST00000490800 CDKL2Q92772 493 aa7.49□□□□□ -1.21
CLDN1-202ENST00000490800 RAB7BQ96AH8 199 aa7.49□□□□□ -1.21
CLDN1-202ENST00000490800 ECHDC3Q96DC8 303 aa7.49□□□□□ -1.21
CLDN1-202ENST00000490800 DNAJC1Q96KC8 554 aaKnown RBP7.49□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms