RNA–Protein interactions for RNA: ENST00000489451.1

ACTN4-206, Transcript of actinin alpha 4, humanhuman

TSL 3

Gene ACTN4, Length 654 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-206ENST00000489451 FCRL5Q96RD9 977 aa11.5□□□□□ -0.57
ACTN4-206ENST00000489451 NRTNQ99748 197 aa11.5□□□□□ -0.57
ACTN4-206ENST00000489451 MAP3K3Q99759 626 aa11.5□□□□□ -0.57
ACTN4-206ENST00000489451 MAK16Q9BXY0 300 aaKnown RBP11.5□□□□□ -0.57
ACTN4-206ENST00000489451 TRIM55Q9BYV6 548 aa11.5□□□□□ -0.57
ACTN4-206ENST00000489451 C10orf88Q9H8K7 445 aa11.5□□□□□ -0.57
ACTN4-206ENST00000489451 LHX9Q9NQ69 397 aa11.5□□□□□ -0.57
ACTN4-206ENST00000489451 LNPEPQ9UIQ6 1025 aa11.5□□□□□ -0.57
ACTN4-206ENST00000489451 INTUQ9ULD6 942 aa11.5□□□□□ -0.57
ACTN4-206ENST00000489451 TFR2Q9UP52 801 aa11.5□□□□□ -0.57
ACTN4-206ENST00000489451 KCTD3Q9Y597 815 aa11.5□□□□□ -0.57
ACTN4-206ENST00000489451 CFAP20Q9Y6A4 193 aaKnown RBP11.5□□□□□ -0.57
ACTN4-206ENST00000489451 SPTBP11277 2137 aa11.5□□□□□ -0.57
ACTN4-206ENST00000489451 MTSS1O43312 755 aa11.49□□□□□ -0.57
ACTN4-206ENST00000489451 KATNA1O75449 491 aa11.49□□□□□ -0.57
ACTN4-206ENST00000489451 CREG1O75629 220 aa11.49□□□□□ -0.57
ACTN4-206ENST00000489451 EPOP01588 193 aa11.49□□□□□ -0.57
ACTN4-206ENST00000489451 EBLN1P0CF75 366 aa11.49□□□□□ -0.57
ACTN4-206ENST00000489451 SLC1A1P43005 524 aa11.49□□□□□ -0.57
ACTN4-206ENST00000489451 CD97P48960 835 aa11.49□□□□□ -0.57
ACTN4-206ENST00000489451 NR2C2P49116 596 aa11.49□□□□□ -0.57
ACTN4-206ENST00000489451 PMS2P54278 862 aa11.49□□□□□ -0.57
ACTN4-206ENST00000489451 RPS18P62269 152 aaKnown RBP11.49□□□□□ -0.57
ACTN4-206ENST00000489451 TBX2Q13207 712 aaPredicted RBP11.49□□□□□ -0.57
ACTN4-206ENST00000489451 MSLNQ13421 630 aaPredicted RBP11.49□□□□□ -0.57
ACTN4-206ENST00000489451 TUBB3Q13509 450 aa11.49□□□□□ -0.57
ACTN4-206ENST00000489451 DNASE1L3Q13609 305 aa11.49□□□□□ -0.57
ACTN4-206ENST00000489451 IL10RAQ13651 578 aa11.49□□□□□ -0.57
ACTN4-206ENST00000489451 SPA17Q15506 151 aa11.49□□□□□ -0.57
ACTN4-206ENST00000489451 ODF2Q5BJF6 829 aa11.49□□□□□ -0.57
ACTN4-206ENST00000489451 FAM199XQ6PEV8 388 aaPredicted RBP11.49□□□□□ -0.57
ACTN4-206ENST00000489451 FBXO38Q6PIJ6 1188 aa11.49□□□□□ -0.57
ACTN4-206ENST00000489451 TMEM220Q6QAJ8 160 aa11.49□□□□□ -0.57
ACTN4-206ENST00000489451 GLT6D1Q7Z4J2 308 aa11.49□□□□□ -0.57
ACTN4-206ENST00000489451 ZC3H18Q86VM9 953 aaKnown RBP11.49□□□□□ -0.57
ACTN4-206ENST00000489451 AMZ2Q86W34 360 aa11.49□□□□□ -0.57
ACTN4-206ENST00000489451 PPP1R3BQ86XI6 285 aa11.49□□□□□ -0.57
ACTN4-206ENST00000489451 LILRA3Q8N6C8 439 aaPredicted RBP11.49□□□□□ -0.57
ACTN4-206ENST00000489451 IPMKQ8NFU5 416 aa11.49□□□□□ -0.57
ACTN4-206ENST00000489451 SPDYE1Q8NFV5 336 aaPredicted RBP11.49□□□□□ -0.57
ACTN4-206ENST00000489451 GDAP1Q8TB36 358 aa11.49□□□□□ -0.57
ACTN4-206ENST00000489451 BLOC1S5Q8TDH9 187 aa11.49□□□□□ -0.57
ACTN4-206ENST00000489451 KRT35Q92764 455 aa11.49□□□□□ -0.57
ACTN4-206ENST00000489451 ZDHHC12Q96GR4 267 aa11.49□□□□□ -0.57
ACTN4-206ENST00000489451 MRFAP1L1Q96HT8 127 aa11.49□□□□□ -0.57
ACTN4-206ENST00000489451 QKIQ96PU8 341 aaKnown RBP eCLIP11.49□□□□□ -0.575e-8■□□□□ 9.4
ACTN4-206ENST00000489451 INSM2Q96T92 566 aaPredicted RBP11.49□□□□□ -0.57
ACTN4-206ENST00000489451 TRABDQ9H4I3 376 aa11.49□□□□□ -0.57
ACTN4-206ENST00000489451 SMOXQ9NWM0 555 aa11.49□□□□□ -0.57
ACTN4-206ENST00000489451 DDX56Q9NY93 547 aaKnown RBP11.49□□□□□ -0.57
ACTN4-206ENST00000489451 TLK1Q9UKI8 766 aa11.49□□□□□ -0.57
ACTN4-206ENST00000489451 ICE1Q9Y2F5 2266 aa11.49□□□□□ -0.57
ACTN4-206ENST00000489451 FER1L5A0AVI2 2057 aa11.48□□□□□ -0.57
ACTN4-206ENST00000489451 SPTBN1Q01082 2364 aaKnown RBP11.48□□□□□ -0.57
ACTN4-206ENST00000489451 GLYATL1P3A0A0U1RQE8 302 aa11.48□□□□□ -0.57
ACTN4-206ENST00000489451 CDC14CA4D256 554 aa11.48□□□□□ -0.57
ACTN4-206ENST00000489451 OR5K3A6NET4 321 aa11.48□□□□□ -0.57
ACTN4-206ENST00000489451 IPO7O95373 1038 aaKnown RBP11.48□□□□□ -0.57
ACTN4-206ENST00000489451 MTHFD1P11586 935 aaKnown RBP11.48□□□□□ -0.57
ACTN4-206ENST00000489451 PBLDP30039 288 aaPredicted RBP11.48□□□□□ -0.57
ACTN4-206ENST00000489451 GTF2H3Q13889 308 aa11.48□□□□□ -0.57
ACTN4-206ENST00000489451 LDLRAP1Q5SW96 308 aa11.48□□□□□ -0.57
ACTN4-206ENST00000489451 PRAMEF17Q5VTA0 474 aa11.48□□□□□ -0.57
ACTN4-206ENST00000489451 METRNLQ641Q3 311 aa11.48□□□□□ -0.57
ACTN4-206ENST00000489451 CPZQ66K79 652 aa11.48□□□□□ -0.57
ACTN4-206ENST00000489451 LCN10Q6JVE6 187 aa11.48□□□□□ -0.57
ACTN4-206ENST00000489451 TCTN3Q6NUS6 607 aa11.48□□□□□ -0.57
ACTN4-206ENST00000489451 ZNF517Q6ZMY9 492 aaPredicted RBP11.48□□□□□ -0.57
ACTN4-206ENST00000489451 DET1Q7L5Y6 550 aa11.48□□□□□ -0.57
ACTN4-206ENST00000489451 CCDC170Q8IYT3 715 aa11.48□□□□□ -0.57
ACTN4-206ENST00000489451 D2HGDHQ8N465 521 aa11.48□□□□□ -0.57
ACTN4-206ENST00000489451 SLC38A9Q8NBW4 561 aa11.48□□□□□ -0.57
ACTN4-206ENST00000489451 BRSK1Q8TDC3 778 aa11.48□□□□□ -0.57
ACTN4-206ENST00000489451 UBXN4Q92575 508 aa11.48□□□□□ -0.57
ACTN4-206ENST00000489451 RMDN2Q96LZ7 410 aa11.48□□□□□ -0.57
ACTN4-206ENST00000489451 SRPK1Q96SB4 655 aaKnown RBP11.48□□□□□ -0.57
ACTN4-206ENST00000489451 RBSNQ9H1K0 784 aa11.48□□□□□ -0.57
ACTN4-206ENST00000489451 ACTL8Q9H568 366 aa11.48□□□□□ -0.57
ACTN4-206ENST00000489451 KLHL8Q9P2G9 620 aaPredicted RBP11.48□□□□□ -0.57
ACTN4-206ENST00000489451 POLHQ9Y253 713 aa11.48□□□□□ -0.57
ACTN4-206ENST00000489451 ALG6Q9Y672 507 aa11.48□□□□□ -0.57
ACTN4-206ENST00000489451 ARL5AQ9Y689 179 aa11.48□□□□□ -0.57
ACTN4-206ENST00000489451 SHANK1Q9Y566 2161 aa11.48□□□□□ -0.57
ACTN4-206ENST00000489451 PSTPIP1O43586 416 aa11.47□□□□□ -0.57
ACTN4-206ENST00000489451 SPOPO43791 374 aa11.47□□□□□ -0.57
ACTN4-206ENST00000489451 KCNJ13O60928 360 aa11.47□□□□□ -0.57
ACTN4-206ENST00000489451 AGTP01019 485 aa11.47□□□□□ -0.57
ACTN4-206ENST00000489451 VCLP18206 1134 aa11.47□□□□□ -0.57
ACTN4-206ENST00000489451 HLA-DPA1P20036 260 aa11.47□□□□□ -0.57
ACTN4-206ENST00000489451 ADRA1AP35348 466 aa11.47□□□□□ -0.57
ACTN4-206ENST00000489451 CYLC1P35663 651 aaPredicted RBP11.47□□□□□ -0.57
ACTN4-206ENST00000489451 HALP42357 657 aa11.47□□□□□ -0.57
ACTN4-206ENST00000489451 MAGEA1P43355 309 aa11.47□□□□□ -0.57
ACTN4-206ENST00000489451 ARCN1P48444 511 aaKnown RBP11.47□□□□□ -0.57
ACTN4-206ENST00000489451 ZNF75DP51815 510 aa11.47□□□□□ -0.57
ACTN4-206ENST00000489451 KPNA2P52292 529 aaKnown RBP11.47□□□□□ -0.57
ACTN4-206ENST00000489451 HADHBP55084 474 aaKnown RBP11.47□□□□□ -0.57
ACTN4-206ENST00000489451 MLLT10P55197 1068 aa11.47□□□□□ -0.57
ACTN4-206ENST00000489451 XIAPP98170 497 aa11.47□□□□□ -0.57
ACTN4-206ENST00000489451 KLRB1Q12918 225 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms