RNA–Protein interactions for RNA: ENST00000489111.1

USP11-211, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 3

Gene USP11, Length 516 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-211ENST00000489111 IGFALSP35858 605 aa9.85□□□□□ -0.83
USP11-211ENST00000489111 SLC1A6P48664 564 aa9.85□□□□□ -0.83
USP11-211ENST00000489111 NAGLUP54802 743 aa9.85□□□□□ -0.83
USP11-211ENST00000489111 DNAJB13P59910 316 aa9.85□□□□□ -0.83
USP11-211ENST00000489111 ABCE1P61221 599 aaKnown RBP9.85□□□□□ -0.83
USP11-211ENST00000489111 NFKB2Q00653 900 aa9.85□□□□□ -0.83
USP11-211ENST00000489111 NAPRTQ6XQN6 538 aa9.85□□□□□ -0.83
USP11-211ENST00000489111 SPATA21Q7Z572 469 aa9.85□□□□□ -0.83
USP11-211ENST00000489111 CRLF3Q8IUI8 442 aa9.85□□□□□ -0.83
USP11-211ENST00000489111 FBXO39Q8N4B4 442 aa9.85□□□□□ -0.83
USP11-211ENST00000489111 TMEM151AQ8N4L1 468 aa9.85□□□□□ -0.83
USP11-211ENST00000489111 SPEM1Q8N4L4 309 aa9.85□□□□□ -0.83
USP11-211ENST00000489111 PTGR2Q8N8N7 351 aaPredicted RBP9.85□□□□□ -0.83
USP11-211ENST00000489111 GLMNQ92990 594 aa9.85□□□□□ -0.83
USP11-211ENST00000489111 FUBP1Q96AE4 644 aaKnown RBP9.85□□□□□ -0.83
USP11-211ENST00000489111 COX14Q96I36 57 aa9.85□□□□□ -0.83
USP11-211ENST00000489111 C7orf26Q96N11 449 aa9.85□□□□□ -0.83
USP11-211ENST00000489111 ASB2Q96Q27 587 aa9.85□□□□□ -0.83
USP11-211ENST00000489111 ATOH8Q96SQ7 321 aa9.85□□□□□ -0.83
USP11-211ENST00000489111 ELAC2Q9BQ52 826 aaKnown RBP9.85□□□□□ -0.83
USP11-211ENST00000489111 TEX101Q9BY14 249 aa9.85□□□□□ -0.83
USP11-211ENST00000489111 CHRDQ9H2X0 955 aa9.85□□□□□ -0.83
USP11-211ENST00000489111 FZD3Q9NPG1 666 aa9.85□□□□□ -0.83
USP11-211ENST00000489111 CD93Q9NPY3 652 aa9.85□□□□□ -0.83
USP11-211ENST00000489111 MBNL1Q9NR56 388 aaKnown RBP9.85□□□□□ -0.83
USP11-211ENST00000489111 NUDT4Q9NZJ9 180 aa9.85□□□□□ -0.83
USP11-211ENST00000489111 NCKIPSDQ9NZQ3 722 aa9.85□□□□□ -0.83
USP11-211ENST00000489111 CD274Q9NZQ7 290 aa9.85□□□□□ -0.83
USP11-211ENST00000489111 ATXN10Q9UBB4 475 aa9.85□□□□□ -0.83
USP11-211ENST00000489111 TMEM98Q9Y2Y6 226 aa9.85□□□□□ -0.83
USP11-211ENST00000489111 OR1A2Q9Y585 309 aa9.85□□□□□ -0.83
USP11-211ENST00000489111 ANKRD36A6QL64 1941 aa9.85□□□□□ -0.83
USP11-211ENST00000489111 TCF20Q9UGU0 1960 aaKnown RBP9.84□□□□□ -0.83
USP11-211ENST00000489111 BPTFQ12830 3046 aa9.84□□□□□ -0.83
USP11-211ENST00000489111 NEMP2A6NFY4 417 aa9.84□□□□□ -0.83
USP11-211ENST00000489111 NCF1BA6NI72 391 aaPredicted RBP9.84□□□□□ -0.83
USP11-211ENST00000489111 NCF1CA8MVU1 366 aaPredicted RBP9.84□□□□□ -0.83
USP11-211ENST00000489111 FPGTO14772 594 aa9.84□□□□□ -0.83
USP11-211ENST00000489111 LIN7AO14910 233 aaPredicted RBP9.84□□□□□ -0.83
USP11-211ENST00000489111 RAD51BO15315 384 aa9.84□□□□□ -0.83
USP11-211ENST00000489111 SNNO75324 88 aaPredicted RBP9.84□□□□□ -0.83
USP11-211ENST00000489111 FSBPO95073 299 aa9.84□□□□□ -0.83
USP11-211ENST00000489111 C8GP07360 202 aa9.84□□□□□ -0.83
USP11-211ENST00000489111 MPC1LP0DKB6 136 aa9.84□□□□□ -0.83
USP11-211ENST00000489111 NCF1P14598 390 aaPredicted RBP9.84□□□□□ -0.83
USP11-211ENST00000489111 ZNF8P17098 575 aaPredicted RBP9.84□□□□□ -0.83
USP11-211ENST00000489111 HNRNPA2B1P22626 353 aaKnown RBP9.84□□□□□ -0.83
USP11-211ENST00000489111 CD6P30203 668 aa9.84□□□□□ -0.83
USP11-211ENST00000489111 SERPINB5P36952 375 aa9.84□□□□□ -0.83
USP11-211ENST00000489111 MAPK9P45984 424 aa9.84□□□□□ -0.83
USP11-211ENST00000489111 RPS9P46781 194 aaKnown RBP9.84□□□□□ -0.83
USP11-211ENST00000489111 CCR3P51677 355 aa9.84□□□□□ -0.83
USP11-211ENST00000489111 CCR5P51681 352 aa9.84□□□□□ -0.83
USP11-211ENST00000489111 OCRLQ01968 901 aa9.84□□□□□ -0.83
USP11-211ENST00000489111 OVGP1Q12889 678 aa9.84□□□□□ -0.83
USP11-211ENST00000489111 SP140Q13342 867 aa9.84□□□□□ -0.83
USP11-211ENST00000489111 RCN2Q14257 317 aa9.84□□□□□ -0.83
USP11-211ENST00000489111 GAS6Q14393 721 aa9.84□□□□□ -0.83
USP11-211ENST00000489111 PFKFB4Q16877 469 aa9.84□□□□□ -0.83
USP11-211ENST00000489111 PLA2G4EQ3MJ16 856 aa9.84□□□□□ -0.83
USP11-211ENST00000489111 TMEM31Q5JXX7 168 aa9.84□□□□□ -0.83
USP11-211ENST00000489111 NEK10Q6ZWH5 1172 aa9.84□□□□□ -0.83
USP11-211ENST00000489111 LRRTM4Q86VH4 590 aa9.84□□□□□ -0.83
USP11-211ENST00000489111 CACNA2D3Q8IZS8 1091 aa9.84□□□□□ -0.83
USP11-211ENST00000489111 ANKS4BQ8N8V4 417 aa9.84□□□□□ -0.83
USP11-211ENST00000489111 CCDC197Q8NCU1 140 aa9.84□□□□□ -0.83
USP11-211ENST00000489111 HM13Q8TCT9 377 aa9.84□□□□□ -0.83
USP11-211ENST00000489111 FOXJ1Q92949 421 aa9.84□□□□□ -0.83
USP11-211ENST00000489111 CLDN23Q96B33 292 aa9.84□□□□□ -0.83
USP11-211ENST00000489111 PHF21BQ96EK2 531 aa9.84□□□□□ -0.83
USP11-211ENST00000489111 TOE1Q96GM8 510 aaKnown RBP9.84□□□□□ -0.83
USP11-211ENST00000489111 FOPNLQ96NB1 174 aa9.84□□□□□ -0.83
USP11-211ENST00000489111 IER2Q9BTL4 223 aa9.84□□□□□ -0.83
USP11-211ENST00000489111 GATA5Q9BWX5 397 aaPredicted RBP9.84□□□□□ -0.83
USP11-211ENST00000489111 TRIM54Q9BYV2 358 aa9.84□□□□□ -0.83
USP11-211ENST00000489111 TRIM55Q9BYV6 548 aa9.84□□□□□ -0.83
USP11-211ENST00000489111 TPSD1Q9BZJ3 242 aa9.84□□□□□ -0.83
USP11-211ENST00000489111 NPHS2Q9NP85 383 aa9.84□□□□□ -0.83
USP11-211ENST00000489111 EBF1Q9UH73 591 aa9.84□□□□□ -0.83
USP11-211ENST00000489111 MBD1Q9UIS9 605 aaPredicted RBP9.84□□□□□ -0.83
USP11-211ENST00000489111 IKZF3Q9UKT9 509 aa9.84□□□□□ -0.83
USP11-211ENST00000489111 GPR34Q9UPC5 381 aa9.84□□□□□ -0.83
USP11-211ENST00000489111 SIT1Q9Y3P8 196 aa9.84□□□□□ -0.83
USP11-211ENST00000489111 ZNF106Q9H2Y7 1883 aaKnown RBP9.84□□□□□ -0.83
USP11-211ENST00000489111 F5P12259 2224 aa9.84□□□□□ -0.83
USP11-211ENST00000489111 CKAP5Q14008 2032 aa9.83□□□□□ -0.84
USP11-211ENST00000489111 SCN8AQ9UQD0 1980 aa9.83□□□□□ -0.84
USP11-211ENST00000489111 H3BM21 787 aa9.83□□□□□ -0.84
USP11-211ENST00000489111 NPHS1O60500 1241 aa9.83□□□□□ -0.84
USP11-211ENST00000489111 LYPLA1O75608 230 aaPredicted RBP9.83□□□□□ -0.84
USP11-211ENST00000489111 POP7O75817 140 aaKnown RBP9.83□□□□□ -0.84
USP11-211ENST00000489111 SNUPNO95149 360 aaKnown RBP9.83□□□□□ -0.84
USP11-211ENST00000489111 ENO2P09104 434 aaPredicted RBP9.83□□□□□ -0.84
USP11-211ENST00000489111 VCLP18206 1134 aa9.83□□□□□ -0.84
USP11-211ENST00000489111 CYP2A7P20853 494 aa9.83□□□□□ -0.84
USP11-211ENST00000489111 KELP23276 732 aa9.83□□□□□ -0.84
USP11-211ENST00000489111 TRIM23P36406 574 aa9.83□□□□□ -0.84
USP11-211ENST00000489111 NUDT1P36639 197 aa9.83□□□□□ -0.84
USP11-211ENST00000489111 PREPP48147 710 aa9.83□□□□□ -0.84
USP11-211ENST00000489111 KCNC1P48547 511 aa9.83□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms