RNA–Protein interactions for RNA: ENST00000488864.5

CHD1L-208, Transcript of chromodomain helicase DNA binding protein 1 like, humanhuman

TSL 2

Gene CHD1L, Length 2,415 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1L-208ENST00000488864 TIE1P35590 1138 aa13.13□□□□□ -0.31
CHD1L-208ENST00000488864 AP1S1P61966 158 aa13.13□□□□□ -0.31
CHD1L-208ENST00000488864 SFSWAPQ12872 951 aaKnown RBP13.13□□□□□ -0.31
CHD1L-208ENST00000488864 CBX3Q13185 183 aa13.13□□□□□ -0.31
CHD1L-208ENST00000488864 TDGQ13569 410 aa13.13□□□□□ -0.31
CHD1L-208ENST00000488864 SEPT6Q14141 434 aa13.13□□□□□ -0.31
CHD1L-208ENST00000488864 C2orf27AQ580R0 203 aa13.13□□□□□ -0.31
CHD1L-208ENST00000488864 LRRC73Q5JTD7 316 aa13.13□□□□□ -0.31
CHD1L-208ENST00000488864 KRT80Q6KB66 452 aa13.13□□□□□ -0.31
CHD1L-208ENST00000488864 TMEM135Q86UB9 458 aa13.13□□□□□ -0.31
CHD1L-208ENST00000488864 CHPFQ8IZ52 775 aa13.13□□□□□ -0.31
CHD1L-208ENST00000488864 HMGCLL1Q8TB92 370 aa13.13□□□□□ -0.31
CHD1L-208ENST00000488864 BLOC1S5Q8TDH9 187 aa13.13□□□□□ -0.31
CHD1L-208ENST00000488864 KCTD4Q8WVF5 259 aa13.13□□□□□ -0.31
CHD1L-208ENST00000488864 LPGAT1Q92604 370 aa13.13□□□□□ -0.31
CHD1L-208ENST00000488864 GFM2Q969S9 779 aaKnown RBP13.13□□□□□ -0.31
CHD1L-208ENST00000488864 VPS39Q96JC1 886 aa13.13□□□□□ -0.31
CHD1L-208ENST00000488864 TRIB3Q96RU7 358 aa13.13□□□□□ -0.31
CHD1L-208ENST00000488864 UNKQ9C0B0 810 aaKnown RBP13.13□□□□□ -0.31
CHD1L-208ENST00000488864 CEP44Q9C0F1 390 aa13.13□□□□□ -0.31
CHD1L-208ENST00000488864 PLGRKTQ9HBL7 147 aa13.13□□□□□ -0.31
CHD1L-208ENST00000488864 PNPLA3Q9NST1 481 aa13.13□□□□□ -0.31
CHD1L-208ENST00000488864 SLC8A2Q9UPR5 921 aa13.13□□□□□ -0.31
CHD1L-208ENST00000488864 RUVBL2Q9Y230 463 aaKnown RBP13.13□□□□□ -0.31
CHD1L-208ENST00000488864 LOC730098B7Z3J9 87 aa13.13□□□□□ -0.31
CHD1L-208ENST00000488864 H0YJX3 145 aa13.13□□□□□ -0.31
CHD1L-208ENST00000488864 K7EQS6 105 aa13.13□□□□□ -0.31
CHD1L-208ENST00000488864 EGFP01133 1207 aa13.13□□□□□ -0.31
CHD1L-208ENST00000488864 RHDQ02161 417 aa13.13□□□□□ -0.31
CHD1L-208ENST00000488864 SEMG2Q02383 582 aa13.13□□□□□ -0.31
CHD1L-208ENST00000488864 PDAP1Q13442 181 aaKnown RBP13.13□□□□□ -0.31
CHD1L-208ENST00000488864 FAM219BQ5XKK7 198 aa13.13□□□□□ -0.31
CHD1L-208ENST00000488864 CACUL1Q86Y37 369 aa13.13□□□□□ -0.31
CHD1L-208ENST00000488864 CLVS1Q8IUQ0 354 aaPredicted RBP13.13□□□□□ -0.31
CHD1L-208ENST00000488864 SPNS2Q8IVW8 549 aa13.13□□□□□ -0.31
CHD1L-208ENST00000488864 SPATA6LQ8N4H0 392 aa13.13□□□□□ -0.31
CHD1L-208ENST00000488864 ZNF513Q8N8E2 541 aaPredicted RBP13.13□□□□□ -0.31
CHD1L-208ENST00000488864 SNX31Q8N9S9 440 aa13.13□□□□□ -0.31
CHD1L-208ENST00000488864 ZBTB8BQ8NAP8 495 aaPredicted RBP13.13□□□□□ -0.31
CHD1L-208ENST00000488864 FEM1CQ96JP0 617 aa13.13□□□□□ -0.31
CHD1L-208ENST00000488864 MCMBPQ9BTE3 642 aa13.13□□□□□ -0.31
CHD1L-208ENST00000488864 DCUN1D5Q9BTE7 237 aa13.13□□□□□ -0.31
CHD1L-208ENST00000488864 GMPR2Q9P2T1 348 aaKnown RBP13.13□□□□□ -0.31
CHD1L-208ENST00000488864 KIAA1549LQ6ZVL6 1849 aa13.13□□□□□ -0.31
CHD1L-208ENST00000488864 CROCCQ5TZA2 2017 aa13.13□□□□□ -0.31
CHD1L-208ENST00000488864 TCF20Q9UGU0 1960 aaKnown RBP13.13□□□□□ -0.31
CHD1L-208ENST00000488864 PRORSD1PA6NEY8 169 aa13.12□□□□□ -0.31
CHD1L-208ENST00000488864 A8MX80 341 aa13.12□□□□□ -0.31
CHD1L-208ENST00000488864 FBP2O00757 339 aa13.12□□□□□ -0.31
CHD1L-208ENST00000488864 TIMM44O43615 452 aa13.12□□□□□ -0.31
CHD1L-208ENST00000488864 DLX3O60479 287 aa13.12□□□□□ -0.31
CHD1L-208ENST00000488864 NDST3O95803 873 aa13.12□□□□□ -0.31
CHD1L-208ENST00000488864 EPHX1P07099 455 aa13.12□□□□□ -0.31
CHD1L-208ENST00000488864 CTSLP07711 333 aa13.12□□□□□ -0.31
CHD1L-208ENST00000488864 CTPS1P17812 591 aa13.12□□□□□ -0.31
CHD1L-208ENST00000488864 CES1P23141 567 aa13.12□□□□□ -0.31
CHD1L-208ENST00000488864 ARSIQ5FYB1 569 aa13.12□□□□□ -0.31
CHD1L-208ENST00000488864 KCNMB4Q86W47 210 aa13.12□□□□□ -0.31
CHD1L-208ENST00000488864 ZSWIM9Q86XI8 627 aa13.12□□□□□ -0.31
CHD1L-208ENST00000488864 FAM47BQ8NA70 645 aa13.12□□□□□ -0.31
CHD1L-208ENST00000488864 KDM1BQ8NB78 822 aa13.12□□□□□ -0.31
CHD1L-208ENST00000488864 ISOC1Q96CN7 298 aa13.12□□□□□ -0.31
CHD1L-208ENST00000488864 OMDQ99983 421 aa13.12□□□□□ -0.31
CHD1L-208ENST00000488864 ATP13A3Q9H7F0 1226 aa13.12□□□□□ -0.31
CHD1L-208ENST00000488864 SUCOQ9UBS9 1254 aaKnown RBP13.12□□□□□ -0.31
CHD1L-208ENST00000488864 VTI1BQ9UEU0 232 aa13.12□□□□□ -0.31
CHD1L-208ENST00000488864 ZNHIT2Q9UHR6 403 aa13.12□□□□□ -0.31
CHD1L-208ENST00000488864 CNOT6Q9ULM6 557 aaKnown RBP13.12□□□□□ -0.31
CHD1L-208ENST00000488864 SH3GLB1Q9Y371 365 aa13.12□□□□□ -0.31
CHD1L-208ENST00000488864 SOCS2O14508 198 aa13.12□□□□□ -0.31
CHD1L-208ENST00000488864 SDHDO14521 159 aa13.12□□□□□ -0.31
CHD1L-208ENST00000488864 LEFTY1O75610 366 aa13.12□□□□□ -0.31
CHD1L-208ENST00000488864 BMP10O95393 424 aa13.12□□□□□ -0.31
CHD1L-208ENST00000488864 POP4O95707 220 aaKnown RBP13.12□□□□□ -0.31
CHD1L-208ENST00000488864 CSRP3P50461 194 aa13.12□□□□□ -0.31
CHD1L-208ENST00000488864 PRAMEP78395 509 aa13.12□□□□□ -0.31
CHD1L-208ENST00000488864 ZP2Q05996 745 aa13.12□□□□□ -0.31
CHD1L-208ENST00000488864 ZNF460Q14592 562 aa13.12□□□□□ -0.31
CHD1L-208ENST00000488864 NHSL2Q5HYW2 709 aa13.12□□□□□ -0.31
CHD1L-208ENST00000488864 TSTD2Q5T7W7 516 aa13.12□□□□□ -0.31
CHD1L-208ENST00000488864 NUDT18Q6ZVK8 323 aa13.12□□□□□ -0.31
CHD1L-208ENST00000488864 PATL1Q86TB9 770 aaKnown RBP13.12□□□□□ -0.31
CHD1L-208ENST00000488864 RALGPS2Q86X27 583 aaPredicted RBP13.12□□□□□ -0.31
CHD1L-208ENST00000488864 STK40Q8N2I9 435 aa13.12□□□□□ -0.31
CHD1L-208ENST00000488864 FSTL5Q8N475 847 aaPredicted RBP13.12□□□□□ -0.31
CHD1L-208ENST00000488864 CCNYL1Q8N7R7 359 aa13.12□□□□□ -0.31
CHD1L-208ENST00000488864 C12orf43Q96C57 262 aaKnown RBP13.12□□□□□ -0.31
CHD1L-208ENST00000488864 TMEM245Q9H330 911 aa13.12□□□□□ -0.31
CHD1L-208ENST00000488864 CLK4Q9HAZ1 481 aaKnown RBP13.12□□□□□ -0.31
CHD1L-208ENST00000488864 CXorf51AA0A1B0GTR3 108 aa13.11□□□□□ -0.31
CHD1L-208ENST00000488864 AURKAO14965 403 aa13.11□□□□□ -0.31
CHD1L-208ENST00000488864 TIPRLO75663 272 aa13.11□□□□□ -0.31
CHD1L-208ENST00000488864 GNAO1P09471 354 aa13.11□□□□□ -0.31
CHD1L-208ENST00000488864 ALPIP09923 528 aa13.11□□□□□ -0.31
CHD1L-208ENST00000488864 SRFP11831 508 aa13.11□□□□□ -0.31
CHD1L-208ENST00000488864 HLA-DPA1P20036 260 aa13.11□□□□□ -0.31
CHD1L-208ENST00000488864 NMBRP28336 390 aa13.11□□□□□ -0.31
CHD1L-208ENST00000488864 SERPINA4P29622 427 aa13.11□□□□□ -0.31
CHD1L-208ENST00000488864 CSNK1DP48730 415 aa13.11□□□□□ -0.31
CHD1L-208ENST00000488864 METAP1P53582 386 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms