RNA–Protein interactions for RNA: ENST00000486641.2

CCDC171-208, Transcript of coiled-coil domain containing 171, humanhuman

TSL 1 (best)

Gene CCDC171, Length 2,322 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-208ENST00000486641 HABP4Q5JVS0 413 aaKnown RBP10.51□□□□□ -0.73
CCDC171-208ENST00000486641 KIAA0319Q5VV43 1072 aa10.51□□□□□ -0.73
CCDC171-208ENST00000486641 LYPD8Q6UX82 237 aa10.51□□□□□ -0.73
CCDC171-208ENST00000486641 TUBA1AQ71U36 451 aa10.51□□□□□ -0.73
CCDC171-208ENST00000486641 FAM83AQ86UY5 434 aa10.51□□□□□ -0.73
CCDC171-208ENST00000486641 UNC93AQ86WB7 457 aa10.51□□□□□ -0.73
CCDC171-208ENST00000486641 MICU2Q8IYU8 434 aa10.51□□□□□ -0.73
CCDC171-208ENST00000486641 PROKR1Q8TCW9 393 aa10.51□□□□□ -0.73
CCDC171-208ENST00000486641 C18orf25Q96B23 403 aaPredicted RBP10.51□□□□□ -0.73
CCDC171-208ENST00000486641 SLC47A1Q96FL8 570 aa10.51□□□□□ -0.73
CCDC171-208ENST00000486641 CEP295NLQ96MC4 621 aa10.51□□□□□ -0.73
CCDC171-208ENST00000486641 ZNF583Q96ND8 569 aa10.51□□□□□ -0.73
CCDC171-208ENST00000486641 TRIM39Q9HCM9 518 aa10.51□□□□□ -0.73
CCDC171-208ENST00000486641 SEMA4BQ9NPR2 832 aaPredicted RBP10.51□□□□□ -0.73
CCDC171-208ENST00000486641 SCN3BQ9NY72 215 aa10.51□□□□□ -0.73
CCDC171-208ENST00000486641 ADGRE2Q9UHX3 823 aa10.51□□□□□ -0.73
CCDC171-208ENST00000486641 AGO1Q9UL18 857 aaKnown RBP10.51□□□□□ -0.73
CCDC171-208ENST00000486641 ERVH48-1M5A8F1 160 aa10.51□□□□□ -0.73
CCDC171-208ENST00000486641 DSCR3O14972 297 aa10.51□□□□□ -0.73
CCDC171-208ENST00000486641 VPS4BO75351 444 aa10.51□□□□□ -0.73
CCDC171-208ENST00000486641 BEST1O76090 585 aa10.51□□□□□ -0.73
CCDC171-208ENST00000486641 NPPAP01160 153 aa10.51□□□□□ -0.73
CCDC171-208ENST00000486641 MTHFD2P13995 350 aa10.51□□□□□ -0.73
CCDC171-208ENST00000486641 CD1DP15813 335 aa10.51□□□□□ -0.73
CCDC171-208ENST00000486641 ARF4P18085 180 aaPredicted RBP10.51□□□□□ -0.73
CCDC171-208ENST00000486641 ADRA1AP35348 466 aa10.51□□□□□ -0.73
CCDC171-208ENST00000486641 UGT2B10P36537 528 aa10.51□□□□□ -0.73
CCDC171-208ENST00000486641 HCAR3P49019 387 aa10.51□□□□□ -0.73
CCDC171-208ENST00000486641 TUFMP49411 452 aaKnown RBP10.51□□□□□ -0.73
CCDC171-208ENST00000486641 KRR1Q13601 381 aaKnown RBP10.51□□□□□ -0.73
CCDC171-208ENST00000486641 OR4D1Q15615 310 aa10.51□□□□□ -0.73
CCDC171-208ENST00000486641 SYT16Q17RD7 645 aa10.51□□□□□ -0.73
CCDC171-208ENST00000486641 PLA2G4EQ3MJ16 856 aa10.51□□□□□ -0.73
CCDC171-208ENST00000486641 Q5BKY6 102 aa10.51□□□□□ -0.73
CCDC171-208ENST00000486641 OR5K1Q8NHB7 308 aa10.51□□□□□ -0.73
CCDC171-208ENST00000486641 RASSF5Q8WWW0 418 aa10.51□□□□□ -0.73
CCDC171-208ENST00000486641 TTYH2Q9BSA4 534 aa10.51□□□□□ -0.73
CCDC171-208ENST00000486641 BRINP2Q9C0B6 783 aa10.51□□□□□ -0.73
CCDC171-208ENST00000486641 ACTR8Q9H981 624 aa10.51□□□□□ -0.73
CCDC171-208ENST00000486641 WDR6Q9NNW5 1121 aaKnown RBP10.51□□□□□ -0.73
CCDC171-208ENST00000486641 RNF19AQ9NV58 838 aa10.51□□□□□ -0.73
CCDC171-208ENST00000486641 PAQR5Q9NXK6 330 aaPredicted RBP10.51□□□□□ -0.73
CCDC171-208ENST00000486641 EHD3Q9NZN3 535 aa10.51□□□□□ -0.73
CCDC171-208ENST00000486641 MOSPD1Q9UJG1 213 aa10.51□□□□□ -0.73
CCDC171-208ENST00000486641 PCDHGB6Q9Y5F9 930 aa10.51□□□□□ -0.73
CCDC171-208ENST00000486641 BRCA1P38398 1863 aaKnown RBP10.5□□□□□ -0.73
CCDC171-208ENST00000486641 FAM234BA2RU67 622 aa10.5□□□□□ -0.73
CCDC171-208ENST00000486641 OR2A25A4D2G3 310 aa10.5□□□□□ -0.73
CCDC171-208ENST00000486641 RGS10O43665 173 aa10.5□□□□□ -0.73
CCDC171-208ENST00000486641 CRCPO75575 148 aa10.5□□□□□ -0.73
CCDC171-208ENST00000486641 SEMA3DO95025 777 aa10.5□□□□□ -0.73
CCDC171-208ENST00000486641 APOA1P02647 267 aa10.5□□□□□ -0.73
CCDC171-208ENST00000486641 UBL4AP11441 157 aa10.5□□□□□ -0.73
CCDC171-208ENST00000486641 CYP4B1P13584 511 aa10.5□□□□□ -0.73
CCDC171-208ENST00000486641 CYP2C18P33260 490 aa10.5□□□□□ -0.73
CCDC171-208ENST00000486641 LIPAP38571 399 aa10.5□□□□□ -0.73
CCDC171-208ENST00000486641 MRPL19P49406 292 aaKnown RBP10.5□□□□□ -0.73
CCDC171-208ENST00000486641 PRKCDQ05655 676 aa10.5□□□□□ -0.73
CCDC171-208ENST00000486641 C19orf57Q0VDD7 668 aa10.5□□□□□ -0.73
CCDC171-208ENST00000486641 FKBP1CQ5VVH2 108 aa10.5□□□□□ -0.73
CCDC171-208ENST00000486641 RAB44Q7Z6P3 723 aaPredicted RBP10.5□□□□□ -0.73
CCDC171-208ENST00000486641 FAM20CQ8IXL6 584 aa10.5□□□□□ -0.73
CCDC171-208ENST00000486641 ELMOD2Q8IZ81 293 aa10.5□□□□□ -0.73
CCDC171-208ENST00000486641 EID3Q8N140 333 aa10.5□□□□□ -0.73
CCDC171-208ENST00000486641 CADM2Q8N3J6 435 aa10.5□□□□□ -0.73
CCDC171-208ENST00000486641 OR2T11Q8NH01 316 aa10.5□□□□□ -0.73
CCDC171-208ENST00000486641 ANGPTL6Q8NI99 470 aa10.5□□□□□ -0.73
CCDC171-208ENST00000486641 RHBDF1Q96CC6 855 aa10.5□□□□□ -0.73
CCDC171-208ENST00000486641 PABPC5Q96DU9 382 aaKnown RBP10.5□□□□□ -0.73
CCDC171-208ENST00000486641 ZFYVE19Q96K21 471 aa10.5□□□□□ -0.73
CCDC171-208ENST00000486641 FCRL5Q96RD9 977 aa10.5□□□□□ -0.73
CCDC171-208ENST00000486641 GDF15Q99988 308 aa10.5□□□□□ -0.73
CCDC171-208ENST00000486641 FDXACB1Q9BRP7 624 aaPredicted RBP10.5□□□□□ -0.73
CCDC171-208ENST00000486641 CDADC1Q9BWV3 514 aa10.5□□□□□ -0.73
CCDC171-208ENST00000486641 GORASP2Q9H8Y8 452 aa10.5□□□□□ -0.73
CCDC171-208ENST00000486641 SNX6Q9UNH7 406 aa10.5□□□□□ -0.73
CCDC171-208ENST00000486641 WBP11Q9Y2W2 641 aaKnown RBP10.5□□□□□ -0.73
CCDC171-208ENST00000486641 GSTA4O15217 222 aa10.5□□□□□ -0.73
CCDC171-208ENST00000486641 AIREO43918 545 aa10.5□□□□□ -0.73
CCDC171-208ENST00000486641 ANXA9O76027 345 aa10.5□□□□□ -0.73
CCDC171-208ENST00000486641 CD4P01730 458 aa10.5□□□□□ -0.73
CCDC171-208ENST00000486641 SLC4A1P02730 911 aa10.5□□□□□ -0.73
CCDC171-208ENST00000486641 DNTTP04053 509 aa10.5□□□□□ -0.73
CCDC171-208ENST00000486641 PRDX3P30048 256 aaKnown RBP10.5□□□□□ -0.73
CCDC171-208ENST00000486641 FMO4P31512 558 aa10.5□□□□□ -0.73
CCDC171-208ENST00000486641 GRIK1P39086 918 aa10.5□□□□□ -0.73
CCDC171-208ENST00000486641 OAZ1P54368 228 aa10.5□□□□□ -0.73
CCDC171-208ENST00000486641 DEFA1P59665 94 aa10.5□□□□□ -0.73
CCDC171-208ENST00000486641 DEFA3P59666 94 aa10.5□□□□□ -0.73
CCDC171-208ENST00000486641 MFSD10Q14728 455 aa10.5□□□□□ -0.73
CCDC171-208ENST00000486641 AAK1Q2M2I8 961 aa10.5□□□□□ -0.73
CCDC171-208ENST00000486641 BCL7AQ4VC05 210 aa10.5□□□□□ -0.73
CCDC171-208ENST00000486641 CYP4Z1Q86W10 505 aa10.5□□□□□ -0.73
CCDC171-208ENST00000486641 ZFAND4Q86XD8 727 aa10.5□□□□□ -0.73
CCDC171-208ENST00000486641 CCDC117Q8IWD4 279 aaPredicted RBP10.5□□□□□ -0.73
CCDC171-208ENST00000486641 CRYBG2Q8N1P7 616 aa10.5□□□□□ -0.73
CCDC171-208ENST00000486641 DPP10Q8N608 796 aa10.5□□□□□ -0.73
CCDC171-208ENST00000486641 SLC38A4Q969I6 547 aa10.5□□□□□ -0.73
CCDC171-208ENST00000486641 PDLIM5Q96HC4 596 aaKnown RBP10.5□□□□□ -0.73
CCDC171-208ENST00000486641 SPATA17Q96L03 361 aa10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms