RNA–Protein interactions for RNA: ENST00000486184.1

NUP50-216, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 821 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-216ENST00000486184 CD59P13987 128 aa11.19□□□□□ -0.62
NUP50-216ENST00000486184 PKMP14618 531 aaKnown RBP11.19□□□□□ -0.62
NUP50-216ENST00000486184 ITGB6P18564 788 aa11.19□□□□□ -0.62
NUP50-216ENST00000486184 CHRM3P20309 590 aa11.19□□□□□ -0.62
NUP50-216ENST00000486184 LEPRP48357 1165 aaKnown RBP11.19□□□□□ -0.62
NUP50-216ENST00000486184 CD151P48509 253 aa11.19□□□□□ -0.62
NUP50-216ENST00000486184 CLCNKAP51800 687 aa11.19□□□□□ -0.62
NUP50-216ENST00000486184 ADARP55265 1226 aaKnown RBP11.19□□□□□ -0.62
NUP50-216ENST00000486184 GPX6P59796 221 aa11.19□□□□□ -0.62
NUP50-216ENST00000486184 VSNL1P62760 191 aa11.19□□□□□ -0.62
NUP50-216ENST00000486184 FOXK1P85037 733 aa11.19□□□□□ -0.62
NUP50-216ENST00000486184 NAB1Q13506 487 aa11.19□□□□□ -0.62
NUP50-216ENST00000486184 NFE2L1Q14494 772 aa11.19□□□□□ -0.62
NUP50-216ENST00000486184 SEPT7Q16181 437 aaKnown RBP11.19□□□□□ -0.62
NUP50-216ENST00000486184 C6orf132Q5T0Z8 1188 aa11.19□□□□□ -0.62
NUP50-216ENST00000486184 TEDDM1Q5T9Z0 273 aa11.19□□□□□ -0.62
NUP50-216ENST00000486184 WDR93Q6P2C0 686 aa11.19□□□□□ -0.62
NUP50-216ENST00000486184 CCNI2Q6ZMN8 369 aaPredicted RBP11.19□□□□□ -0.62
NUP50-216ENST00000486184 CYS1Q717R9 158 aa11.19□□□□□ -0.62
NUP50-216ENST00000486184 KANSL1Q7Z3B3 1105 aa11.19□□□□□ -0.62
NUP50-216ENST00000486184 STRA8Q7Z7C7 330 aa11.19□□□□□ -0.62
NUP50-216ENST00000486184 C11orf96Q7Z7L8 435 aa11.19□□□□□ -0.62
NUP50-216ENST00000486184 GALNT7Q86SF2 657 aa11.19□□□□□ -0.62
NUP50-216ENST00000486184 NRROSQ86YC3 692 aa11.19□□□□□ -0.62
NUP50-216ENST00000486184 CFAP206Q8IYR0 622 aa11.19□□□□□ -0.62
NUP50-216ENST00000486184 TMEM159Q96B96 161 aa11.19□□□□□ -0.62
NUP50-216ENST00000486184 LINC00615Q96LM1 132 aaPredicted RBP11.19□□□□□ -0.62
NUP50-216ENST00000486184 CYTH2Q99418 400 aa11.19□□□□□ -0.62
NUP50-216ENST00000486184 P2RY12Q9H244 342 aa11.19□□□□□ -0.62
NUP50-216ENST00000486184 CAAP1Q9H8G2 361 aa11.19□□□□□ -0.62
NUP50-216ENST00000486184 PLAC1Q9HBJ0 212 aa11.19□□□□□ -0.62
NUP50-216ENST00000486184 SARS2Q9NP81 518 aaKnown RBP11.19□□□□□ -0.62
NUP50-216ENST00000486184 GULP1Q9UBP9 304 aa11.19□□□□□ -0.62
NUP50-216ENST00000486184 SLC23A2Q9UGH3 650 aa11.19□□□□□ -0.62
NUP50-216ENST00000486184 ACSL5Q9ULC5 683 aa11.19□□□□□ -0.62
NUP50-216ENST00000486184 CORO1CQ9ULV4 474 aaPredicted RBP11.19□□□□□ -0.62
NUP50-216ENST00000486184 IKBKGQ9Y6K9 419 aa11.19□□□□□ -0.62
NUP50-216ENST00000486184 ZNF292O60281 2723 aa11.19□□□□□ -0.62
NUP50-216ENST00000486184 MYO15AQ9UKN7 3530 aa11.18□□□□□ -0.62
NUP50-216ENST00000486184 A0A087WUV0 522 aaPredicted RBP11.18□□□□□ -0.62
NUP50-216ENST00000486184 FAM159BA6NKW6 160 aa11.18□□□□□ -0.62
NUP50-216ENST00000486184 OR5K4A6NMS3 321 aa11.18□□□□□ -0.62
NUP50-216ENST00000486184 LIN7AO14910 233 aaPredicted RBP11.18□□□□□ -0.62
NUP50-216ENST00000486184 SIGLEC6O43699 453 aa11.18□□□□□ -0.62
NUP50-216ENST00000486184 SGTAO43765 313 aa11.18□□□□□ -0.62
NUP50-216ENST00000486184 SH3BP5O60239 455 aa11.18□□□□□ -0.62
NUP50-216ENST00000486184 VPS26AO75436 327 aa11.18□□□□□ -0.62
NUP50-216ENST00000486184 HAUS5O94927 633 aa11.18□□□□□ -0.62
NUP50-216ENST00000486184 LDOC1O95751 146 aaPredicted RBP11.18□□□□□ -0.62
NUP50-216ENST00000486184 F7P08709 466 aaPredicted RBP11.18□□□□□ -0.62
NUP50-216ENST00000486184 FAM153BP0C7A2 387 aa11.18□□□□□ -0.62
NUP50-216ENST00000486184 F3P13726 295 aa11.18□□□□□ -0.62
NUP50-216ENST00000486184 RPL10P27635 214 aaKnown RBP11.18□□□□□ -0.62
NUP50-216ENST00000486184 DUSP3P51452 185 aaPredicted RBP11.18□□□□□ -0.62
NUP50-216ENST00000486184 PLOD1Q02809 727 aaPredicted RBP11.18□□□□□ -0.62
NUP50-216ENST00000486184 DMPKQ09013 629 aa11.18□□□□□ -0.62
NUP50-216ENST00000486184 BRD3Q15059 726 aa11.18□□□□□ -0.62
NUP50-216ENST00000486184 NR0B2Q15466 257 aa11.18□□□□□ -0.62
NUP50-216ENST00000486184 KLHL38Q2WGJ6 581 aa11.18□□□□□ -0.62
NUP50-216ENST00000486184 KBTBD12Q3ZCT8 623 aa11.18□□□□□ -0.62
NUP50-216ENST00000486184 FAM153CQ494X1 144 aa11.18□□□□□ -0.62
NUP50-216ENST00000486184 MAP9Q49MG5 647 aa11.18□□□□□ -0.62
NUP50-216ENST00000486184 ZNF789Q5FWF6 425 aa11.18□□□□□ -0.62
NUP50-216ENST00000486184 UGT3A1Q6NUS8 523 aa11.18□□□□□ -0.62
NUP50-216ENST00000486184 CNSTQ6PJW8 725 aa11.18□□□□□ -0.62
NUP50-216ENST00000486184 OTOAQ7RTW8 1153 aa11.18□□□□□ -0.62
NUP50-216ENST00000486184 TRIM48Q8IWZ4 208 aa11.18□□□□□ -0.62
NUP50-216ENST00000486184 KRT222Q8N1A0 295 aa11.18□□□□□ -0.62
NUP50-216ENST00000486184 PPM1NQ8N819 430 aa11.18□□□□□ -0.62
NUP50-216ENST00000486184 ARL10Q8N8L6 244 aa11.18□□□□□ -0.62
NUP50-216ENST00000486184 GPATCH11Q8N954 259 aa11.18□□□□□ -0.62
NUP50-216ENST00000486184 AVL9Q8NBF6 648 aa11.18□□□□□ -0.62
NUP50-216ENST00000486184 MAPK15Q8TD08 544 aa11.18□□□□□ -0.62
NUP50-216ENST00000486184 UBLCP1Q8WVY7 318 aaPredicted RBP11.18□□□□□ -0.62
NUP50-216ENST00000486184 ASZ1Q8WWH4 475 aa11.18□□□□□ -0.62
NUP50-216ENST00000486184 ATXN7L3BQ96GX2 97 aa11.18□□□□□ -0.62
NUP50-216ENST00000486184 CNDP2Q96KP4 475 aaKnown RBP11.18□□□□□ -0.62
NUP50-216ENST00000486184 CDC6Q99741 560 aa11.18□□□□□ -0.62
NUP50-216ENST00000486184 CPNE1Q99829 537 aa11.18□□□□□ -0.62
NUP50-216ENST00000486184 COG4Q9H9E3 785 aa11.18□□□□□ -0.62
NUP50-216ENST00000486184 SPATS2LQ9NUQ6 558 aaKnown RBP11.18□□□□□ -0.62
NUP50-216ENST00000486184 SLC17A6Q9P2U8 582 aa11.18□□□□□ -0.62
NUP50-216ENST00000486184 BTBD3Q9Y2F9 522 aa11.18□□□□□ -0.62
NUP50-216ENST00000486184 USP34Q70CQ2 3546 aa11.17□□□□□ -0.62
NUP50-216ENST00000486184 KIR2DS5A0A0G2JLQ3 304 aa11.17□□□□□ -0.62
NUP50-216ENST00000486184 A0A0G2JNG1 304 aa11.17□□□□□ -0.62
NUP50-216ENST00000486184 IQCF5A8MTL0 148 aa11.17□□□□□ -0.62
NUP50-216ENST00000486184 KIR2DS3K7RE56 304 aa11.17□□□□□ -0.62
NUP50-216ENST00000486184 IFRD1O00458 451 aaPredicted RBP11.17□□□□□ -0.62
NUP50-216ENST00000486184 TRIM38O00635 465 aa11.17□□□□□ -0.62
NUP50-216ENST00000486184 SLC30A4O14863 429 aa11.17□□□□□ -0.62
NUP50-216ENST00000486184 NIPSNAP2O75323 286 aa11.17□□□□□ -0.62
NUP50-216ENST00000486184 AHSGP02765 367 aa11.17□□□□□ -0.62
NUP50-216ENST00000486184 MYBL2P10244 700 aa11.17□□□□□ -0.62
NUP50-216ENST00000486184 GP5P40197 560 aa11.17□□□□□ -0.62
NUP50-216ENST00000486184 SLC12A2P55011 1212 aa11.17□□□□□ -0.62
NUP50-216ENST00000486184 CSE1LP55060 971 aaKnown RBP11.17□□□□□ -0.62
NUP50-216ENST00000486184 HSPA14Q0VDF9 509 aa11.17□□□□□ -0.62
NUP50-216ENST00000486184 RPA4Q13156 261 aa11.17□□□□□ -0.62
NUP50-216ENST00000486184 KIR2DS5Q14953 304 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms