RNA–Protein interactions for RNA: ENST00000486159.5

TMEM39A-208, Transcript of transmembrane protein 39A, humanhuman

TSL 3

Gene TMEM39A, Length 826 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-208ENST00000486159 CBARPQ8N350 705 aaPredicted RBP9.3□□□□□ -0.92
TMEM39A-208ENST00000486159 ARL14Q8N4G2 192 aa9.3□□□□□ -0.92
TMEM39A-208ENST00000486159 PAF1Q8N7H5 531 aa9.3□□□□□ -0.92
TMEM39A-208ENST00000486159 GSDMBQ8TAX9 411 aa9.3□□□□□ -0.92
TMEM39A-208ENST00000486159 FBF1Q8TES7 1133 aa9.3□□□□□ -0.92
TMEM39A-208ENST00000486159 JPH3Q8WXH2 748 aaPredicted RBP9.3□□□□□ -0.92
TMEM39A-208ENST00000486159 ZBTB9Q96C00 473 aa9.3□□□□□ -0.92
TMEM39A-208ENST00000486159 MTBPQ96DY7 904 aa9.3□□□□□ -0.92
TMEM39A-208ENST00000486159 STAMBPL1Q96FJ0 436 aa9.3□□□□□ -0.92
TMEM39A-208ENST00000486159 SIGLEC10Q96LC7 697 aa9.3□□□□□ -0.92
TMEM39A-208ENST00000486159 TEKT5Q96M29 485 aa9.3□□□□□ -0.92
TMEM39A-208ENST00000486159 PSKH2Q96QS6 385 aa9.3□□□□□ -0.92
TMEM39A-208ENST00000486159 AGAP2Q99490 1192 aa9.3□□□□□ -0.92
TMEM39A-208ENST00000486159 SELENOSQ9BQE4 189 aa9.3□□□□□ -0.92
TMEM39A-208ENST00000486159 DPEP2Q9H4A9 486 aa9.3□□□□□ -0.92
TMEM39A-208ENST00000486159 LRRC40Q9H9A6 602 aa9.3□□□□□ -0.92
TMEM39A-208ENST00000486159 CARS2Q9HA77 564 aaKnown RBP9.3□□□□□ -0.92
TMEM39A-208ENST00000486159 NKIRAS1Q9NYS0 192 aa9.3□□□□□ -0.92
TMEM39A-208ENST00000486159 NCKIPSDQ9NZQ3 722 aa9.3□□□□□ -0.92
TMEM39A-208ENST00000486159 LRIT1Q9P2V4 623 aa9.3□□□□□ -0.92
TMEM39A-208ENST00000486159 RSPH14Q9UHP6 348 aa9.3□□□□□ -0.92
TMEM39A-208ENST00000486159 CHMP2BQ9UQN3 213 aa9.3□□□□□ -0.92
TMEM39A-208ENST00000486159 TMEM98Q9Y2Y6 226 aa9.3□□□□□ -0.92
TMEM39A-208ENST00000486159 PIEZO2Q9H5I5 2752 aa9.3□□□□□ -0.92
TMEM39A-208ENST00000486159 TCRBV9S1A1TA0A576 114 aa9.29□□□□□ -0.92
TMEM39A-208ENST00000486159 PRSS38A1L453 326 aa9.29□□□□□ -0.92
TMEM39A-208ENST00000486159 C9orf172C9J069 976 aa9.29□□□□□ -0.92
TMEM39A-208ENST00000486159 C3orf80F5H4A9 247 aa9.29□□□□□ -0.92
TMEM39A-208ENST00000486159 POC1B-GALNT4F8VUJ3 575 aa9.29□□□□□ -0.92
TMEM39A-208ENST00000486159 CACNB4O00305 520 aaPredicted RBP9.29□□□□□ -0.92
TMEM39A-208ENST00000486159 HTRA2O43464 458 aaPredicted RBP9.29□□□□□ -0.92
TMEM39A-208ENST00000486159 FAM107AO95990 144 aa9.29□□□□□ -0.92
TMEM39A-208ENST00000486159 SOD1P00441 154 aa9.29□□□□□ -0.92
TMEM39A-208ENST00000486159 INHBAP08476 426 aa9.29□□□□□ -0.92
TMEM39A-208ENST00000486159 ITGA2BP08514 1039 aa9.29□□□□□ -0.92
TMEM39A-208ENST00000486159 CCNB1P14635 433 aa9.29□□□□□ -0.92
TMEM39A-208ENST00000486159 BRAFP15056 766 aa9.29□□□□□ -0.92
TMEM39A-208ENST00000486159 CHN1P15882 459 aa9.29□□□□□ -0.92
TMEM39A-208ENST00000486159 PGAM1P18669 254 aa9.29□□□□□ -0.92
TMEM39A-208ENST00000486159 KRT15P19012 456 aa9.29□□□□□ -0.92
TMEM39A-208ENST00000486159 GCAP28676 217 aa9.29□□□□□ -0.92
TMEM39A-208ENST00000486159 SSTR1P30872 391 aa9.29□□□□□ -0.92
TMEM39A-208ENST00000486159 GNPDA1P46926 289 aa9.29□□□□□ -0.92
TMEM39A-208ENST00000486159 RENBPP51606 427 aa9.29□□□□□ -0.92
TMEM39A-208ENST00000486159 SUOXP51687 545 aa9.29□□□□□ -0.92
TMEM39A-208ENST00000486159 MAPK10P53779 464 aa9.29□□□□□ -0.92
TMEM39A-208ENST00000486159 GUCY1A3Q02108 690 aa9.29□□□□□ -0.92
TMEM39A-208ENST00000486159 RHDQ02161 417 aa9.29□□□□□ -0.92
TMEM39A-208ENST00000486159 NSUN2Q08J23 767 aaKnown RBP eCLIP9.29□□□□□ -0.92
TMEM39A-208ENST00000486159 GRM3Q14832 879 aa9.29□□□□□ -0.92
TMEM39A-208ENST00000486159 ZSCAN26Q16670 478 aa9.29□□□□□ -0.92
TMEM39A-208ENST00000486159 SKIDA1Q1XH10 827 aa9.29□□□□□ -0.92
TMEM39A-208ENST00000486159 C14orf28Q4W4Y0 310 aa9.29□□□□□ -0.92
TMEM39A-208ENST00000486159 CERCAMQ5T4B2 595 aa9.29□□□□□ -0.92
TMEM39A-208ENST00000486159 UBAP2Q5T6F2 1119 aaKnown RBP9.29□□□□□ -0.92
TMEM39A-208ENST00000486159 TMCO4Q5TGY1 634 aa9.29□□□□□ -0.92
TMEM39A-208ENST00000486159 KCTD11Q693B1 232 aa9.29□□□□□ -0.92
TMEM39A-208ENST00000486159 DOK6Q6PKX4 331 aa9.29□□□□□ -0.92
TMEM39A-208ENST00000486159 CCDC81Q6ZN84 652 aa9.29□□□□□ -0.92
TMEM39A-208ENST00000486159 B4GALNT4Q76KP1 1039 aa9.29□□□□□ -0.92
TMEM39A-208ENST00000486159 ZNF534Q76KX8 674 aa9.29□□□□□ -0.92
TMEM39A-208ENST00000486159 SLC26A11Q86WA9 606 aa9.29□□□□□ -0.92
TMEM39A-208ENST00000486159 HEATR4Q86WZ0 1026 aa9.29□□□□□ -0.92
TMEM39A-208ENST00000486159 LRRC6Q86X45 466 aa9.29□□□□□ -0.92
TMEM39A-208ENST00000486159 ZNF761Q86XN6 746 aaPredicted RBP9.29□□□□□ -0.92
TMEM39A-208ENST00000486159 SLITRK4Q8IW52 837 aa9.29□□□□□ -0.92
TMEM39A-208ENST00000486159 RCBTB1Q8NDN9 531 aa9.29□□□□□ -0.92
TMEM39A-208ENST00000486159 BCAS4Q8TDM0 211 aa9.29□□□□□ -0.92
TMEM39A-208ENST00000486159 SNRNP27Q8WVK2 155 aaKnown RBP9.29□□□□□ -0.92
TMEM39A-208ENST00000486159 SLC44A1Q8WWI5 657 aa9.29□□□□□ -0.92
TMEM39A-208ENST00000486159 SCG3Q8WXD2 468 aaKnown RBP9.29□□□□□ -0.92
TMEM39A-208ENST00000486159 CDKL2Q92772 493 aa9.29□□□□□ -0.92
TMEM39A-208ENST00000486159 USP7Q93009 1102 aa9.29□□□□□ -0.92
TMEM39A-208ENST00000486159 NUS1Q96E22 293 aa9.29□□□□□ -0.92
TMEM39A-208ENST00000486159 RNF31Q96EP0 1072 aa9.29□□□□□ -0.92
TMEM39A-208ENST00000486159 LIN37Q96GY3 246 aaPredicted RBP9.29□□□□□ -0.92
TMEM39A-208ENST00000486159 FCRL5Q96RD9 977 aa9.29□□□□□ -0.92
TMEM39A-208ENST00000486159 SMC6Q96SB8 1091 aa9.29□□□□□ -0.92
TMEM39A-208ENST00000486159 PAFAH2Q99487 392 aa9.29□□□□□ -0.92
TMEM39A-208ENST00000486159 NUDT22Q9BRQ3 303 aa9.29□□□□□ -0.92
TMEM39A-208ENST00000486159 WDR83Q9BRX9 315 aaKnown RBP9.29□□□□□ -0.92
TMEM39A-208ENST00000486159 BFARQ9NZS9 450 aa9.29□□□□□ -0.92
TMEM39A-208ENST00000486159 TMEM9Q9P0T7 183 aa9.29□□□□□ -0.92
TMEM39A-208ENST00000486159 SEPT10Q9P0V9 454 aa9.29□□□□□ -0.92
TMEM39A-208ENST00000486159 SEPT3Q9UH03 358 aa9.29□□□□□ -0.92
TMEM39A-208ENST00000486159 SUFUQ9UMX1 484 aa9.29□□□□□ -0.92
TMEM39A-208ENST00000486159 LOXL2Q9Y4K0 774 aa9.29□□□□□ -0.92
TMEM39A-208ENST00000486159 TENM4Q6N022 2769 aa9.29□□□□□ -0.92
TMEM39A-208ENST00000486159 KALRNO60229 2985 aa9.28□□□□□ -0.92
TMEM39A-208ENST00000486159 TMEM120BA0PK00 339 aa9.28□□□□□ -0.92
TMEM39A-208ENST00000486159 PPM1DO15297 605 aa9.28□□□□□ -0.92
TMEM39A-208ENST00000486159 TM9SF1O15321 606 aa9.28□□□□□ -0.92
TMEM39A-208ENST00000486159 ZWINTO95229 277 aa9.28□□□□□ -0.92
TMEM39A-208ENST00000486159 EML2O95834 649 aa9.28□□□□□ -0.92
TMEM39A-208ENST00000486159 POLBP06746 335 aa9.28□□□□□ -0.92
TMEM39A-208ENST00000486159 GLB1P16278 677 aa9.28□□□□□ -0.92
TMEM39A-208ENST00000486159 PSMB4P28070 264 aa9.28□□□□□ -0.92
TMEM39A-208ENST00000486159 ALDH4A1P30038 563 aa9.28□□□□□ -0.92
TMEM39A-208ENST00000486159 CCKBRP32239 447 aa9.28□□□□□ -0.92
TMEM39A-208ENST00000486159 VIPR1P32241 457 aa9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms