RNA–Protein interactions for RNA: ENST00000485397.1

COL27A1-205, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 5

Gene COL27A1, Length 463 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-205ENST00000485397 DUS1LQ6P1R4 473 aaKnown RBP18.81■□□□□ 0.6
COL27A1-205ENST00000485397 DET1Q7L5Y6 550 aa18.81■□□□□ 0.6
COL27A1-205ENST00000485397 ZNF398Q8TD17 642 aa18.81■□□□□ 0.6
COL27A1-205ENST00000485397 INSM2Q96T92 566 aaPredicted RBP18.81■□□□□ 0.6
COL27A1-205ENST00000485397 VAT1Q99536 393 aa18.81■□□□□ 0.6
COL27A1-205ENST00000485397 TWSG1Q9GZX9 223 aa18.81■□□□□ 0.6
COL27A1-205ENST00000485397 WWP1Q9H0M0 922 aa18.81■□□□□ 0.6
COL27A1-205ENST00000485397 RSPH14Q9UHP6 348 aa18.81■□□□□ 0.6
COL27A1-205ENST00000485397 PCDHGA6Q9Y5G7 932 aa18.81■□□□□ 0.6
COL27A1-205ENST00000485397 DOPEY2Q9Y3R5 2298 aa18.81■□□□□ 0.6
COL27A1-205ENST00000485397 PTPN13Q12923 2485 aa18.8■□□□□ 0.6
COL27A1-205ENST00000485397 MKRN2OSH3BPM6 223 aa18.8■□□□□ 0.6
COL27A1-205ENST00000485397 STX7O15400 261 aaKnown RBP18.8■□□□□ 0.6
COL27A1-205ENST00000485397 ZRANB2O95218 330 aaKnown RBP eCLIP18.8■□□□□ 0.6
COL27A1-205ENST00000485397 MT-ND3P03897 115 aa18.8■□□□□ 0.6
COL27A1-205ENST00000485397 NTRK1P04629 796 aa18.8■□□□□ 0.6
COL27A1-205ENST00000485397 MTHFD1P11586 935 aaKnown RBP18.8■□□□□ 0.6
COL27A1-205ENST00000485397 MSH3P20585 1137 aa18.8■□□□□ 0.6
COL27A1-205ENST00000485397 AKT1P31749 480 aa18.8■□□□□ 0.6
COL27A1-205ENST00000485397 MAGEA1P43355 309 aa18.8■□□□□ 0.6
COL27A1-205ENST00000485397 KLRB1Q12918 225 aa18.8■□□□□ 0.6
COL27A1-205ENST00000485397 XRCC4Q13426 336 aa18.8■□□□□ 0.6
COL27A1-205ENST00000485397 UBAP2LQ14157 1087 aaKnown RBP18.8■□□□□ 0.6
COL27A1-205ENST00000485397 METRNLQ641Q3 311 aa18.8■□□□□ 0.6
COL27A1-205ENST00000485397 FAM199XQ6PEV8 388 aaPredicted RBP18.8■□□□□ 0.6
COL27A1-205ENST00000485397 KLHL35Q6PF15 583 aa18.8■□□□□ 0.6
COL27A1-205ENST00000485397 CCDC50Q8IVM0 306 aa18.8■□□□□ 0.6
COL27A1-205ENST00000485397 KATNAL2Q8IYT4 538 aa18.8■□□□□ 0.6
COL27A1-205ENST00000485397 RCOR2Q8IZ40 523 aa18.8■□□□□ 0.6
COL27A1-205ENST00000485397 FICDQ9BVA6 458 aa18.8■□□□□ 0.6
COL27A1-205ENST00000485397 HEMGNQ9BXL5 484 aa18.8■□□□□ 0.6
COL27A1-205ENST00000485397 SMOXQ9NWM0 555 aa18.8■□□□□ 0.6
COL27A1-205ENST00000485397 FAM8A1Q9UBU6 413 aa18.8■□□□□ 0.6
COL27A1-205ENST00000485397 TLK1Q9UKI8 766 aa18.8■□□□□ 0.6
COL27A1-205ENST00000485397 TFR2Q9UP52 801 aa18.8■□□□□ 0.6
COL27A1-205ENST00000485397 PLAAQ9Y263 795 aa18.8■□□□□ 0.6
COL27A1-205ENST00000485397 ARL5AQ9Y689 179 aa18.8■□□□□ 0.6
COL27A1-205ENST00000485397 OR5K3A6NET4 321 aa18.79■□□□□ 0.6
COL27A1-205ENST00000485397 HACD1B0YJ81 288 aa18.79■□□□□ 0.6
COL27A1-205ENST00000485397 AKR1B15C9JRZ8 316 aaPredicted RBP18.79■□□□□ 0.6
COL27A1-205ENST00000485397 RBL1P28749 1068 aa18.79■□□□□ 0.6
COL27A1-205ENST00000485397 ARL4DP49703 201 aa18.79■□□□□ 0.6
COL27A1-205ENST00000485397 HADHBP55084 474 aaKnown RBP18.79■□□□□ 0.6
COL27A1-205ENST00000485397 ACY1Q03154 408 aa18.79■□□□□ 0.6
COL27A1-205ENST00000485397 OLIG2Q13516 323 aa18.79■□□□□ 0.6
COL27A1-205ENST00000485397 LONRF2Q1L5Z9 754 aa18.79■□□□□ 0.6
COL27A1-205ENST00000485397 DNTTIP2Q5QJE6 756 aaKnown RBP18.79■□□□□ 0.6
COL27A1-205ENST00000485397 TCTN3Q6NUS6 607 aa18.79■□□□□ 0.6
COL27A1-205ENST00000485397 CYB5D1Q6P9G0 228 aa18.79■□□□□ 0.6
COL27A1-205ENST00000485397 CNGA4Q8IV77 575 aa18.79■□□□□ 0.6
COL27A1-205ENST00000485397 RNF214Q8ND24 703 aa18.79■□□□□ 0.6
COL27A1-205ENST00000485397 SPDYE1Q8NFV5 336 aaPredicted RBP18.79■□□□□ 0.6
COL27A1-205ENST00000485397 ZNF514Q96K75 400 aaPredicted RBP18.79■□□□□ 0.6
COL27A1-205ENST00000485397 C12orf66Q96MD2 445 aa18.79■□□□□ 0.6
COL27A1-205ENST00000485397 GORASP1Q9BQQ3 440 aa18.79■□□□□ 0.6
COL27A1-205ENST00000485397 FSD1LQ9BXM9 530 aa18.79■□□□□ 0.6
COL27A1-205ENST00000485397 FGF21Q9NSA1 209 aa18.79■□□□□ 0.6
COL27A1-205ENST00000485397 HRASLS2Q9NWW9 162 aa18.79■□□□□ 0.6
COL27A1-205ENST00000485397 ANKMY1Q9P2S6 941 aa18.79■□□□□ 0.6
COL27A1-205ENST00000485397 TRHDEQ9UKU6 1024 aa18.79■□□□□ 0.6
COL27A1-205ENST00000485397 UBA6A0AVT1 1052 aaPredicted RBP18.78■□□□□ 0.6
COL27A1-205ENST00000485397 MGAT4DA6NG13 374 aa18.78■□□□□ 0.6
COL27A1-205ENST00000485397 TLCD2A6NGC4 264 aa18.78■□□□□ 0.6
COL27A1-205ENST00000485397 H7C0C1 242 aa18.78■□□□□ 0.6
COL27A1-205ENST00000485397 RFPL1O75677 317 aa18.78■□□□□ 0.6
COL27A1-205ENST00000485397 PRAMEF1O95521 474 aa18.78■□□□□ 0.6
COL27A1-205ENST00000485397 ATP5OP48047 213 aa18.78■□□□□ 0.6
COL27A1-205ENST00000485397 PMS2P54278 862 aa18.78■□□□□ 0.6
COL27A1-205ENST00000485397 RPS18P62269 152 aaKnown RBP18.78■□□□□ 0.6
COL27A1-205ENST00000485397 TBX2Q13207 712 aaPredicted RBP18.78■□□□□ 0.6
COL27A1-205ENST00000485397 FBXO38Q6PIJ6 1188 aa18.78■□□□□ 0.6
COL27A1-205ENST00000485397 ASB18Q6ZVZ8 466 aa18.78■□□□□ 0.6
COL27A1-205ENST00000485397 TEX19Q8NA77 164 aa18.78■□□□□ 0.6
COL27A1-205ENST00000485397 OR4K2Q8NGD2 314 aa18.78■□□□□ 0.6
COL27A1-205ENST00000485397 KRT35Q92764 455 aa18.78■□□□□ 0.6
COL27A1-205ENST00000485397 PPM1MQ96MI6 270 aa18.78■□□□□ 0.6
COL27A1-205ENST00000485397 FCRL4Q96PJ5 515 aa18.78■□□□□ 0.6
COL27A1-205ENST00000485397 CD180Q99467 661 aa18.78■□□□□ 0.6
COL27A1-205ENST00000485397 APOL2Q9BQE5 337 aa18.78■□□□□ 0.6
COL27A1-205ENST00000485397 ACTL8Q9H568 366 aa18.78■□□□□ 0.6
COL27A1-205ENST00000485397 ASB8Q9H765 288 aa18.78■□□□□ 0.6
COL27A1-205ENST00000485397 FKBPLQ9UIM3 349 aa18.78■□□□□ 0.6
COL27A1-205ENST00000485397 MAN2B2Q9Y2E5 1009 aa18.78■□□□□ 0.6
COL27A1-205ENST00000485397 MAST4O15021 2626 aa18.78■□□□□ 0.6
COL27A1-205ENST00000485397 NAV2Q8IVL1 2488 aa18.77■□□□□ 0.6
COL27A1-205ENST00000485397 OR6C74A6NCV1 312 aa18.77■□□□□ 0.6
COL27A1-205ENST00000485397 C21orf140B9A014 251 aa18.77■□□□□ 0.6
COL27A1-205ENST00000485397 DNAJB5O75953 348 aa18.77■□□□□ 0.6
COL27A1-205ENST00000485397 RECKO95980 971 aa18.77■□□□□ 0.6
COL27A1-205ENST00000485397 PDGFAP04085 211 aa18.77■□□□□ 0.6
COL27A1-205ENST00000485397 POLBP06746 335 aa18.77■□□□□ 0.6
COL27A1-205ENST00000485397 LPOP22079 712 aaPredicted RBP18.77■□□□□ 0.6
COL27A1-205ENST00000485397 ARCN1P48444 511 aaKnown RBP18.77■□□□□ 0.6
COL27A1-205ENST00000485397 GEMP55040 296 aa18.77■□□□□ 0.6
COL27A1-205ENST00000485397 BBS12Q6ZW61 710 aa18.77■□□□□ 0.6
COL27A1-205ENST00000485397 BPHLQ86WA6 291 aaPredicted RBP18.77■□□□□ 0.6
COL27A1-205ENST00000485397 OOSP2Q86WS3 158 aa18.77■□□□□ 0.6
COL27A1-205ENST00000485397 KMT5CQ86Y97 462 aa18.77■□□□□ 0.6
COL27A1-205ENST00000485397 D2HGDHQ8N465 521 aa18.77■□□□□ 0.6
COL27A1-205ENST00000485397 LILRA3Q8N6C8 439 aaPredicted RBP18.77■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms