RNA–Protein interactions for RNA: ENST00000485024.1

VPS8-223, Transcript of VPS8, CORVET complex subunit, human

TSL 2

Gene VPS8, Length 477 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
VPS8-223	ENST00000485024	TNIP1	Q15025	636 aa		3.87	□□□□□ -1.79
VPS8-223	ENST00000485024	SF3B4	Q15427	424 aa	Known RBP eCLIP	3.87	□□□□□ -1.79
VPS8-223	ENST00000485024	C2orf68	Q2NKX9	166 aa		3.87	□□□□□ -1.79
VPS8-223	ENST00000485024	CBWD6	Q4V339	395 aa		3.87	□□□□□ -1.79
VPS8-223	ENST00000485024	ODF2	Q5BJF6	829 aa		3.87	□□□□□ -1.79
VPS8-223	ENST00000485024	CBWD3	Q5JTY5	395 aa		3.87	□□□□□ -1.79
VPS8-223	ENST00000485024	MANEA	Q5SRI9	462 aa		3.87	□□□□□ -1.79
VPS8-223	ENST00000485024	C1QTNF12	Q5T7M4	302 aa		3.87	□□□□□ -1.79
VPS8-223	ENST00000485024	OTUD1	Q5VV17	481 aa	Predicted RBP	3.87	□□□□□ -1.79
VPS8-223	ENST00000485024	DCAF12L2	Q5VW00	463 aa		3.87	□□□□□ -1.79
VPS8-223	ENST00000485024	FRG2	Q64ET8	278 aa		3.87	□□□□□ -1.79
VPS8-223	ENST00000485024	KCTD18	Q6PI47	426 aa	Predicted RBP	3.87	□□□□□ -1.79
VPS8-223	ENST00000485024	MTSS1L	Q765P7	747 aa		3.87	□□□□□ -1.79
VPS8-223	ENST00000485024	SHF	Q7M4L6	423 aa		3.87	□□□□□ -1.79
VPS8-223	ENST00000485024	CCDC190	Q86UF4	302 aa		3.87	□□□□□ -1.79
VPS8-223	ENST00000485024	MAML2	Q8IZL2	1156 aa	Predicted RBP	3.87	□□□□□ -1.79
VPS8-223	ENST00000485024	OR8H3	Q8N146	312 aa		3.87	□□□□□ -1.79
VPS8-223	ENST00000485024	GPATCH11	Q8N954	259 aa		3.87	□□□□□ -1.79
VPS8-223	ENST00000485024	TC2N	Q8N9U0	490 aa		3.87	□□□□□ -1.79
VPS8-223	ENST00000485024	CSNK2A3	Q8NEV1	391 aa		3.87	□□□□□ -1.79
VPS8-223	ENST00000485024	OR6J1	Q8NGC5	347 aa		3.87	□□□□□ -1.79
VPS8-223	ENST00000485024	OR10S1	Q8NGN2	331 aa		3.87	□□□□□ -1.79
VPS8-223	ENST00000485024	OR1J2	Q8NGS2	313 aa		3.87	□□□□□ -1.79
VPS8-223	ENST00000485024	LPGAT1	Q92604	370 aa		3.87	□□□□□ -1.79
VPS8-223	ENST00000485024	SIPA1	Q96FS4	1042 aa		3.87	□□□□□ -1.79
VPS8-223	ENST00000485024	LRFN5	Q96NI6	719 aa		3.87	□□□□□ -1.79
VPS8-223	ENST00000485024	CITED2	Q99967	270 aa	Predicted RBP	3.87	□□□□□ -1.79
VPS8-223	ENST00000485024	HGH1	Q9BTY7	390 aa		3.87	□□□□□ -1.79
VPS8-223	ENST00000485024	MSTO1	Q9BUK6	570 aa		3.87	□□□□□ -1.79
VPS8-223	ENST00000485024	PPP1R3E	Q9H7J1	279 aa		3.87	□□□□□ -1.79
VPS8-223	ENST00000485024	DNAJC18	Q9H819	358 aa		3.87	□□□□□ -1.79
VPS8-223	ENST00000485024	CHMP1A	Q9HD42	196 aa	Predicted RBP	3.87	□□□□□ -1.79
VPS8-223	ENST00000485024	KRCC1	Q9NPI7	259 aa	Predicted RBP	3.87	□□□□□ -1.79
VPS8-223	ENST00000485024	DDX4	Q9NQI0	724 aa	Known RBP	3.87	□□□□□ -1.79
VPS8-223	ENST00000485024	ACSS1	Q9NUB1	689 aa	Predicted RBP	3.87	□□□□□ -1.79
VPS8-223	ENST00000485024	TMEM51	Q9NW97	253 aa		3.87	□□□□□ -1.79
VPS8-223	ENST00000485024	OR6C3	Q9NZP0	311 aa		3.87	□□□□□ -1.79
VPS8-223	ENST00000485024	STK39	Q9UEW8	545 aa		3.87	□□□□□ -1.79
VPS8-223	ENST00000485024	ACSL5	Q9ULC5	683 aa		3.87	□□□□□ -1.79
VPS8-223	ENST00000485024	PCDHA12	Q9UN75	941 aa		3.87	□□□□□ -1.79
VPS8-223	ENST00000485024	WBP11	Q9Y2W2	641 aa	Known RBP	3.87	□□□□□ -1.79
VPS8-223	ENST00000485024	CLIC4	Q9Y696	253 aa		3.87	□□□□□ -1.79
VPS8-223	ENST00000485024	ATXN2	Q99700	1313 aa	Known RBP	3.87	□□□□□ -1.79
VPS8-223	ENST00000485024		A0A0G2JK05	382 aa		3.86	□□□□□ -1.79
VPS8-223	ENST00000485024		A0A1B0GVY2	172 aa		3.86	□□□□□ -1.79
VPS8-223	ENST00000485024	GOLGA6L9	A6NEM1	432 aa		3.86	□□□□□ -1.79
VPS8-223	ENST00000485024	EIF4E1B	A6NMX2	242 aa	Known RBP	3.86	□□□□□ -1.79
VPS8-223	ENST00000485024		A6NNC1	897 aa		3.86	□□□□□ -1.79
VPS8-223	ENST00000485024		M0QZ24	198 aa		3.86	□□□□□ -1.79
VPS8-223	ENST00000485024	HS3ST1	O14792	307 aa		3.86	□□□□□ -1.79
VPS8-223	ENST00000485024	SPINT2	O43291	252 aa		3.86	□□□□□ -1.79
VPS8-223	ENST00000485024	ITM2A	O43736	263 aa		3.86	□□□□□ -1.79
VPS8-223	ENST00000485024	RSL1D1	O76021	490 aa	Known RBP	3.86	□□□□□ -1.79
VPS8-223	ENST00000485024	BAG2	O95816	211 aa		3.86	□□□□□ -1.79
VPS8-223	ENST00000485024	FTCD	O95954	541 aa		3.86	□□□□□ -1.79
VPS8-223	ENST00000485024	PRLR	P16471	622 aa		3.86	□□□□□ -1.79
VPS8-223	ENST00000485024	IFNAR1	P17181	557 aa		3.86	□□□□□ -1.79
VPS8-223	ENST00000485024	GNLY	P22749	145 aa		3.86	□□□□□ -1.79
VPS8-223	ENST00000485024	NR2F2	P24468	414 aa		3.86	□□□□□ -1.79
VPS8-223	ENST00000485024	EEF1B2	P24534	225 aa	Known RBP	3.86	□□□□□ -1.79
VPS8-223	ENST00000485024	TNFRSF8	P28908	595 aa		3.86	□□□□□ -1.79
VPS8-223	ENST00000485024	ATP5D	P30049	168 aa		3.86	□□□□□ -1.79
VPS8-223	ENST00000485024	GP5	P40197	560 aa		3.86	□□□□□ -1.79
VPS8-223	ENST00000485024	ZNF75D	P51815	510 aa		3.86	□□□□□ -1.79
VPS8-223	ENST00000485024	PPP5C	P53041	499 aa		3.86	□□□□□ -1.79
VPS8-223	ENST00000485024	MTX1	Q13505	466 aa		3.86	□□□□□ -1.79
VPS8-223	ENST00000485024	MYLK3	Q32MK0	819 aa		3.86	□□□□□ -1.79
VPS8-223	ENST00000485024	ZNF324B	Q6AW86	544 aa	Predicted RBP	3.86	□□□□□ -1.79
VPS8-223	ENST00000485024	TPRG1	Q6ZUI0	275 aa		3.86	□□□□□ -1.79
VPS8-223	ENST00000485024	INTS8	Q75QN2	995 aa	Known RBP	3.86	□□□□□ -1.79
VPS8-223	ENST00000485024	PLPPR4	Q7Z2D5	763 aa		3.86	□□□□□ -1.79
VPS8-223	ENST00000485024	HAUS6	Q7Z4H7	955 aa		3.86	□□□□□ -1.79
VPS8-223	ENST00000485024	CAMKMT	Q7Z624	323 aa		3.86	□□□□□ -1.79
VPS8-223	ENST00000485024	ADCK2	Q7Z695	626 aa		3.86	□□□□□ -1.79
VPS8-223	ENST00000485024	CTU1	Q7Z7A3	348 aa	Known RBP	3.86	□□□□□ -1.79
VPS8-223	ENST00000485024	SDCCAG8	Q86SQ7	713 aa	Predicted RBP	3.86	□□□□□ -1.79
VPS8-223	ENST00000485024	IQCH	Q86VS3	1027 aa		3.86	□□□□□ -1.79
VPS8-223	ENST00000485024	ARFGAP1	Q8N6T3	406 aa		3.86	□□□□□ -1.79
VPS8-223	ENST00000485024	KIF18A	Q8NI77	898 aa		3.86	□□□□□ -1.79
VPS8-223	ENST00000485024	AFAP1L1	Q8TED9	768 aa		3.86	□□□□□ -1.79
VPS8-223	ENST00000485024	ATL1	Q8WXF7	558 aa		3.86	□□□□□ -1.79
VPS8-223	ENST00000485024	NEK1	Q96PY6	1258 aa		3.86	□□□□□ -1.79
VPS8-223	ENST00000485024	ISCU	Q9H1K1	167 aa		3.86	□□□□□ -1.79
VPS8-223	ENST00000485024	KCNK15	Q9H427	330 aa		3.86	□□□□□ -1.79
VPS8-223	ENST00000485024	TMEM184C	Q9NVA4	438 aa		3.86	□□□□□ -1.79
VPS8-223	ENST00000485024	TRMT1	Q9NXH9	659 aa	Known RBP	3.86	□□□□□ -1.79
VPS8-223	ENST00000485024	TSPYL4	Q9UJ04	414 aa		3.86	□□□□□ -1.79
VPS8-223	ENST00000485024	HACL1	Q9UJ83	578 aa		3.86	□□□□□ -1.79
VPS8-223	ENST00000485024	RAI2	Q9Y5P3	530 aa		3.86	□□□□□ -1.79
VPS8-223	ENST00000485024	HS3ST3B1	Q9Y662	390 aa		3.86	□□□□□ -1.79
VPS8-223	ENST00000485024	COL22A1	Q8NFW1	1626 aa	Predicted RBP	3.85	□□□□□ -1.79
VPS8-223	ENST00000485024	SIPA1L2	Q9P2F8	1722 aa	Predicted RBP	3.85	□□□□□ -1.79
VPS8-223	ENST00000485024	EDDM13	A0A1B0GTR0	161 aa		3.85	□□□□□ -1.79
VPS8-223	ENST00000485024		A0A1W2PR77	199 aa		3.85	□□□□□ -1.79
VPS8-223	ENST00000485024	ZNF814	B7Z6K7	855 aa		3.85	□□□□□ -1.79
VPS8-223	ENST00000485024	IFNL4	K9M1U5	179 aa		3.85	□□□□□ -1.79
VPS8-223	ENST00000485024	LINC01565	O15544	149 aa		3.85	□□□□□ -1.79
VPS8-223	ENST00000485024	TSPAN1	O60635	241 aa		3.85	□□□□□ -1.79
VPS8-223	ENST00000485024	ATG13	O75143	517 aa		3.85	□□□□□ -1.79
VPS8-223	ENST00000485024	VNN2	O95498	520 aa		3.85	□□□□□ -1.79

Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms