RNA–Protein interactions for RNA: ENST00000484566.5

DDX39B-221, Transcript of DExD-box helicase 39B, humanhuman

TSL 5

Gene DDX39B, Length 857 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39B-221ENST00000484566 FAM199XQ6PEV8 388 aaPredicted RBP8.36□□□□□ -1.07
DDX39B-221ENST00000484566 DCUN1D2Q6PH85 259 aa8.36□□□□□ -1.07
DDX39B-221ENST00000484566 ARHGAP12Q8IWW6 846 aa8.36□□□□□ -1.07
DDX39B-221ENST00000484566 MCEMP1Q8IX19 187 aa8.36□□□□□ -1.07
DDX39B-221ENST00000484566 NPWQ8N729 165 aa8.36□□□□□ -1.07
DDX39B-221ENST00000484566 TMEM102Q8N9M5 508 aaPredicted RBP8.36□□□□□ -1.07
DDX39B-221ENST00000484566 KLHL6Q8WZ60 621 aa8.36□□□□□ -1.07
DDX39B-221ENST00000484566 UBXN4Q92575 508 aa8.36□□□□□ -1.07
DDX39B-221ENST00000484566 RSC1A1Q92681 617 aa8.36□□□□□ -1.07
DDX39B-221ENST00000484566 MR1Q95460 341 aa8.36□□□□□ -1.07
DDX39B-221ENST00000484566 NSMCE3Q96MG7 304 aa8.36□□□□□ -1.07
DDX39B-221ENST00000484566 PLEKHG4BQ96PX9 1271 aa8.36□□□□□ -1.07
DDX39B-221ENST00000484566 AGAP2Q99490 1192 aa8.36□□□□□ -1.07
DDX39B-221ENST00000484566 MGME1Q9BQP7 344 aa8.36□□□□□ -1.07
DDX39B-221ENST00000484566 CNPY3Q9BT09 278 aa8.36□□□□□ -1.07
DDX39B-221ENST00000484566 RIOK2Q9BVS4 552 aaKnown RBP8.36□□□□□ -1.07
DDX39B-221ENST00000484566 NUDT9Q9BW91 350 aa8.36□□□□□ -1.07
DDX39B-221ENST00000484566 NAA15Q9BXJ9 866 aaKnown RBP8.36□□□□□ -1.07
DDX39B-221ENST00000484566 UNKQ9C0B0 810 aaKnown RBP8.36□□□□□ -1.07
DDX39B-221ENST00000484566 ILKAPQ9H0C8 392 aaPredicted RBP8.36□□□□□ -1.07
DDX39B-221ENST00000484566 VPS16Q9H269 839 aa8.36□□□□□ -1.07
DDX39B-221ENST00000484566 NOD2Q9HC29 1040 aa8.36□□□□□ -1.07
DDX39B-221ENST00000484566 WASH6PQ9NQA3 447 aa8.36□□□□□ -1.07
DDX39B-221ENST00000484566 GPATCH2LQ9NWQ4 482 aa8.36□□□□□ -1.07
DDX39B-221ENST00000484566 PCYT1BQ9Y5K3 369 aaPredicted RBP8.36□□□□□ -1.07
DDX39B-221ENST00000484566 SEC16AO15027 2179 aa8.36□□□□□ -1.07
DDX39B-221ENST00000484566 CNTRLQ7Z7A1 2325 aa8.36□□□□□ -1.07
DDX39B-221ENST00000484566 PIKFYVEQ9Y2I7 2098 aa8.36□□□□□ -1.07
DDX39B-221ENST00000484566 ZNF469Q96JG9 3925 aaPredicted RBP8.35□□□□□ -1.07
DDX39B-221ENST00000484566 CSPG4Q6UVK1 2322 aa8.35□□□□□ -1.07
DDX39B-221ENST00000484566 PRSS44E7EML9 344 aa8.35□□□□□ -1.07
DDX39B-221ENST00000484566 FAM229AH3BQW9 127 aa8.35□□□□□ -1.07
DDX39B-221ENST00000484566 KIF1CO43896 1103 aaKnown RBP8.35□□□□□ -1.07
DDX39B-221ENST00000484566 ZNF500O60304 480 aaPredicted RBP8.35□□□□□ -1.07
DDX39B-221ENST00000484566 ALPPP05187 535 aa8.35□□□□□ -1.07
DDX39B-221ENST00000484566 KLK3P07288 261 aaPredicted RBP8.35□□□□□ -1.07
DDX39B-221ENST00000484566 UNGP13051 313 aaPredicted RBP8.35□□□□□ -1.07
DDX39B-221ENST00000484566 XRCC1P18887 633 aaPredicted RBP8.35□□□□□ -1.07
DDX39B-221ENST00000484566 CLCNKAP51800 687 aa8.35□□□□□ -1.07
DDX39B-221ENST00000484566 STC1P52823 247 aa8.35□□□□□ -1.07
DDX39B-221ENST00000484566 MAXP61244 160 aa8.35□□□□□ -1.07
DDX39B-221ENST00000484566 GABPB1Q06547 395 aaPredicted RBP8.35□□□□□ -1.07
DDX39B-221ENST00000484566 PTP4A2Q12974 167 aa8.35□□□□□ -1.07
DDX39B-221ENST00000484566 PTPRRQ15256 657 aa8.35□□□□□ -1.07
DDX39B-221ENST00000484566 SEPT7Q16181 437 aaKnown RBP8.35□□□□□ -1.07
DDX39B-221ENST00000484566 KYNUQ16719 465 aa8.35□□□□□ -1.07
DDX39B-221ENST00000484566 INSCQ1MX18 579 aa8.35□□□□□ -1.07
DDX39B-221ENST00000484566 ZXDCQ2QGD7 858 aaPredicted RBP8.35□□□□□ -1.07
DDX39B-221ENST00000484566 PPP6R3Q5H9R7 873 aaPredicted RBP8.35□□□□□ -1.07
DDX39B-221ENST00000484566 LYPLAL1Q5VWZ2 237 aa8.35□□□□□ -1.07
DDX39B-221ENST00000484566 IZUMO3Q5VZ72 239 aa8.35□□□□□ -1.07
DDX39B-221ENST00000484566 DPY19L2P1Q6NXN4 242 aa8.35□□□□□ -1.07
DDX39B-221ENST00000484566 RFLNAQ6ZTI6 216 aa8.35□□□□□ -1.07
DDX39B-221ENST00000484566 MED25Q71SY5 747 aa8.35□□□□□ -1.07
DDX39B-221ENST00000484566 TMEM126BQ8IUX1 230 aa8.35□□□□□ -1.07
DDX39B-221ENST00000484566 RBM12BQ8IXT5 1001 aaKnown RBP8.35□□□□□ -1.07
DDX39B-221ENST00000484566 CISD2Q8N5K1 135 aaKnown RBP8.35□□□□□ -1.07
DDX39B-221ENST00000484566 ATPAF2Q8N5M1 289 aa8.35□□□□□ -1.07
DDX39B-221ENST00000484566 AOPEPQ8N6M6 819 aa8.35□□□□□ -1.07
DDX39B-221ENST00000484566 TM9SF4Q92544 642 aa8.35□□□□□ -1.07
DDX39B-221ENST00000484566 SGSM3Q96HU1 749 aa8.35□□□□□ -1.07
DDX39B-221ENST00000484566 ZNF514Q96K75 400 aaPredicted RBP8.35□□□□□ -1.07
DDX39B-221ENST00000484566 SMAD5Q99717 465 aaKnown RBP8.35□□□□□ -1.07
DDX39B-221ENST00000484566 TUBGCP2Q9BSJ2 902 aa8.35□□□□□ -1.07
DDX39B-221ENST00000484566 CARD9Q9H257 536 aa8.35□□□□□ -1.07
DDX39B-221ENST00000484566 SRA1Q9HD15 236 aaKnown RBP8.35□□□□□ -1.07
DDX39B-221ENST00000484566 AGPAT4Q9NRZ5 378 aa8.35□□□□□ -1.07
DDX39B-221ENST00000484566 KLC4Q9NSK0 619 aa8.35□□□□□ -1.07
DDX39B-221ENST00000484566 SEPT11Q9NVA2 429 aaKnown RBP8.35□□□□□ -1.07
DDX39B-221ENST00000484566 C5AR2Q9P296 337 aa8.35□□□□□ -1.07
DDX39B-221ENST00000484566 B3GNT3Q9Y2A9 372 aa8.35□□□□□ -1.07
DDX39B-221ENST00000484566 PPIL1Q9Y3C6 166 aa8.35□□□□□ -1.07
DDX39B-221ENST00000484566 SLC30A1Q9Y6M5 507 aa8.35□□□□□ -1.07
DDX39B-221ENST00000484566 A0A0J9YYE9 177 aa8.34□□□□□ -1.07
DDX39B-221ENST00000484566 A0A0U1RQS6 177 aa8.34□□□□□ -1.07
DDX39B-221ENST00000484566 F5H423 210 aaPredicted RBP8.34□□□□□ -1.07
DDX39B-221ENST00000484566 NUAK1O60285 661 aa8.34□□□□□ -1.07
DDX39B-221ENST00000484566 KLHL41O60662 606 aa8.34□□□□□ -1.07
DDX39B-221ENST00000484566 SCRG1O75711 98 aa8.34□□□□□ -1.07
DDX39B-221ENST00000484566 TRBC1P01850 177 aa8.34□□□□□ -1.07
DDX39B-221ENST00000484566 SPTBP11277 2137 aa8.34□□□□□ -1.07
DDX39B-221ENST00000484566 FOLR1P15328 257 aa8.34□□□□□ -1.07
DDX39B-221ENST00000484566 CHRNB2P17787 502 aa8.34□□□□□ -1.07
DDX39B-221ENST00000484566 CA4P22748 312 aa8.34□□□□□ -1.07
DDX39B-221ENST00000484566 PSMA2P25787 234 aa8.34□□□□□ -1.07
DDX39B-221ENST00000484566 MMP13P45452 471 aa8.34□□□□□ -1.07
DDX39B-221ENST00000484566 VAV2P52735 878 aa8.34□□□□□ -1.07
DDX39B-221ENST00000484566 ZNF135P52742 658 aaPredicted RBP8.34□□□□□ -1.07
DDX39B-221ENST00000484566 GSDMDP57764 484 aa8.34□□□□□ -1.07
DDX39B-221ENST00000484566 RPL7AP62424 266 aaKnown RBP8.34□□□□□ -1.07
DDX39B-221ENST00000484566 RAPSNQ13702 412 aa8.34□□□□□ -1.07
DDX39B-221ENST00000484566 LAMB3Q13751 1172 aa8.34□□□□□ -1.07
DDX39B-221ENST00000484566 KCNAB1Q14722 419 aa8.34□□□□□ -1.07
DDX39B-221ENST00000484566 SKOR2Q2VWA4 1001 aaPredicted RBP8.34□□□□□ -1.07
DDX39B-221ENST00000484566 TDRD12Q587J7 1177 aaKnown RBP8.34□□□□□ -1.07
DDX39B-221ENST00000484566 KLHL35Q6PF15 583 aa8.34□□□□□ -1.07
DDX39B-221ENST00000484566 CRTC3Q6UUV7 619 aa8.34□□□□□ -1.07
DDX39B-221ENST00000484566 GDF7Q7Z4P5 450 aa8.34□□□□□ -1.07
DDX39B-221ENST00000484566 PHF13Q86YI8 300 aaPredicted RBP8.34□□□□□ -1.07
DDX39B-221ENST00000484566 RAB43Q86YS6 212 aa8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 101.8 ms