RNA–Protein interactions for RNA: ENST00000484112.5

CPSF4-213, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2

Gene CPSF4, Length 825 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-213ENST00000484112 RNF31Q96EP0 1072 aa9.84□□□□□ -0.83
CPSF4-213ENST00000484112 ABHD17AQ96GS6 310 aa9.84□□□□□ -0.83
CPSF4-213ENST00000484112 SLC45A3Q96JT2 553 aa9.84□□□□□ -0.83
CPSF4-213ENST00000484112 ZNF514Q96K75 400 aaPredicted RBP9.84□□□□□ -0.83
CPSF4-213ENST00000484112 OR2M4Q96R27 311 aa9.84□□□□□ -0.83
CPSF4-213ENST00000484112 RANBP9Q96S59 729 aa9.84□□□□□ -0.83
CPSF4-213ENST00000484112 NAPGQ99747 312 aaPredicted RBP9.84□□□□□ -0.83
CPSF4-213ENST00000484112 RAB6BQ9NRW1 208 aa9.84□□□□□ -0.83
CPSF4-213ENST00000484112 TMEM98Q9Y2Y6 226 aa9.84□□□□□ -0.83
CPSF4-213ENST00000484112 ST14Q9Y5Y6 855 aa9.84□□□□□ -0.83
CPSF4-213ENST00000484112 SAR1BQ9Y6B6 198 aa9.84□□□□□ -0.83
CPSF4-213ENST00000484112 DNMT3AQ9Y6K1 912 aaPredicted RBP9.84□□□□□ -0.83
CPSF4-213ENST00000484112 HEATR9A2RTY3 570 aa9.83□□□□□ -0.84
CPSF4-213ENST00000484112 BLACEA4D250 179 aa9.83□□□□□ -0.84
CPSF4-213ENST00000484112 MROH6A6NGR9 719 aa9.83□□□□□ -0.84
CPSF4-213ENST00000484112 USP27XA6NNY8 438 aa9.83□□□□□ -0.84
CPSF4-213ENST00000484112 B4E171 279 aa9.83□□□□□ -0.84
CPSF4-213ENST00000484112 F5H423 210 aaPredicted RBP9.83□□□□□ -0.84
CPSF4-213ENST00000484112 INPP4BO15327 924 aa9.83□□□□□ -0.84
CPSF4-213ENST00000484112 CAPN5O15484 640 aaPredicted RBP9.83□□□□□ -0.84
CPSF4-213ENST00000484112 LDB2O43679 373 aa9.83□□□□□ -0.84
CPSF4-213ENST00000484112 PHF2O75151 1096 aa9.83□□□□□ -0.84
CPSF4-213ENST00000484112 ASMTLO95671 621 aa9.83□□□□□ -0.84
CPSF4-213ENST00000484112 SLC4A1P02730 911 aa9.83□□□□□ -0.84
CPSF4-213ENST00000484112 ADRA1DP25100 572 aa9.83□□□□□ -0.84
CPSF4-213ENST00000484112 MAP4P27816 1152 aaKnown RBP9.83□□□□□ -0.84
CPSF4-213ENST00000484112 OAS2P29728 719 aaKnown RBP9.83□□□□□ -0.84
CPSF4-213ENST00000484112 RPL22P35268 128 aaKnown RBP9.83□□□□□ -0.84
CPSF4-213ENST00000484112 COILP38432 576 aaPredicted RBP9.83□□□□□ -0.84
CPSF4-213ENST00000484112 TSPAN7P41732 249 aa9.83□□□□□ -0.84
CPSF4-213ENST00000484112 MAGEA6P43360 314 aa9.83□□□□□ -0.84
CPSF4-213ENST00000484112 MAPK9P45984 424 aa9.83□□□□□ -0.84
CPSF4-213ENST00000484112 ZNF140P52738 457 aaPredicted RBP9.83□□□□□ -0.84
CPSF4-213ENST00000484112 RAB15P59190 212 aa9.83□□□□□ -0.84
CPSF4-213ENST00000484112 CDC20Q12834 499 aa9.83□□□□□ -0.84
CPSF4-213ENST00000484112 GTF2H3Q13889 308 aa9.83□□□□□ -0.84
CPSF4-213ENST00000484112 SEPT6Q14141 434 aa9.83□□□□□ -0.84
CPSF4-213ENST00000484112 ATP1A1-AS1Q5TC04 95 aa9.83□□□□□ -0.84
CPSF4-213ENST00000484112 ALS2CLQ60I27 953 aa9.83□□□□□ -0.84
CPSF4-213ENST00000484112 CCDC137Q6PK04 289 aaKnown RBP9.83□□□□□ -0.84
CPSF4-213ENST00000484112 PPP1R21Q6ZMI0 780 aa9.83□□□□□ -0.84
CPSF4-213ENST00000484112 DNAAF3Q8N9W5 541 aa9.83□□□□□ -0.84
CPSF4-213ENST00000484112 OR4K2Q8NGD2 314 aa9.83□□□□□ -0.84
CPSF4-213ENST00000484112 OR10G6Q8NH81 332 aa9.83□□□□□ -0.84
CPSF4-213ENST00000484112 ZNF398Q8TD17 642 aa9.83□□□□□ -0.84
CPSF4-213ENST00000484112 COG1Q8WTW3 980 aa9.83□□□□□ -0.84
CPSF4-213ENST00000484112 APOBEC4Q8WW27 367 aaKnown RBP9.83□□□□□ -0.84
CPSF4-213ENST00000484112 SLCO2A1Q92959 643 aa9.83□□□□□ -0.84
CPSF4-213ENST00000484112 DPYSL5Q9BPU6 564 aa9.83□□□□□ -0.84
CPSF4-213ENST00000484112 TIMM29Q9BSF4 260 aa9.83□□□□□ -0.84
CPSF4-213ENST00000484112 EFHD1Q9BUP0 239 aa9.83□□□□□ -0.84
CPSF4-213ENST00000484112 LRRC4CQ9HCJ2 640 aa9.83□□□□□ -0.84
CPSF4-213ENST00000484112 CASS4Q9NQ75 786 aa9.83□□□□□ -0.84
CPSF4-213ENST00000484112 NLE1Q9NVX2 485 aaPredicted RBP9.83□□□□□ -0.84
CPSF4-213ENST00000484112 KLHL3Q9UH77 587 aa9.83□□□□□ -0.84
CPSF4-213ENST00000484112 PILRAQ9UKJ1 303 aa9.83□□□□□ -0.84
CPSF4-213ENST00000484112 PYCARDQ9ULZ3 195 aa9.83□□□□□ -0.84
CPSF4-213ENST00000484112 ARL5AQ9Y689 179 aa9.83□□□□□ -0.84
CPSF4-213ENST00000484112 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP9.83□□□□□ -0.84
CPSF4-213ENST00000484112 ARHGEF17Q96PE2 2063 aaPredicted RBP9.83□□□□□ -0.84
CPSF4-213ENST00000484112 PRR19A6NJB7 356 aa9.82□□□□□ -0.84
CPSF4-213ENST00000484112 OR5K4A6NMS3 321 aa9.82□□□□□ -0.84
CPSF4-213ENST00000484112 CCDC188H7C350 402 aa9.82□□□□□ -0.84
CPSF4-213ENST00000484112 KMOO15229 486 aa9.82□□□□□ -0.84
CPSF4-213ENST00000484112 GRID2O43424 1007 aa9.82□□□□□ -0.84
CPSF4-213ENST00000484112 SRP72O76094 671 aaKnown RBP9.82□□□□□ -0.84
CPSF4-213ENST00000484112 CDK14O94921 469 aa9.82□□□□□ -0.84
CPSF4-213ENST00000484112 PRAMEF1O95521 474 aa9.82□□□□□ -0.84
CPSF4-213ENST00000484112 TUBB4AP04350 444 aa9.82□□□□□ -0.84
CPSF4-213ENST00000484112 APRTP07741 180 aa9.82□□□□□ -0.84
CPSF4-213ENST00000484112 RALBP11234 206 aa9.82□□□□□ -0.84
CPSF4-213ENST00000484112 VCLP18206 1134 aa9.82□□□□□ -0.84
CPSF4-213ENST00000484112 TCN2P20062 427 aa9.82□□□□□ -0.84
CPSF4-213ENST00000484112 ITGALP20701 1170 aa9.82□□□□□ -0.84
CPSF4-213ENST00000484112 PAFAH1B1P43034 410 aa9.82□□□□□ -0.84
CPSF4-213ENST00000484112 NPY2RP49146 381 aa9.82□□□□□ -0.84
CPSF4-213ENST00000484112 GPLD1P80108 840 aa9.82□□□□□ -0.84
CPSF4-213ENST00000484112 TMEM115Q12893 351 aaPredicted RBP9.82□□□□□ -0.84
CPSF4-213ENST00000484112 NFATC2Q13469 925 aa9.82□□□□□ -0.84
CPSF4-213ENST00000484112 SQSTM1Q13501 440 aa9.82□□□□□ -0.84
CPSF4-213ENST00000484112 SPARCL1Q14515 664 aa9.82□□□□□ -0.84
CPSF4-213ENST00000484112 ATP13A5Q4VNC0 1218 aa9.82□□□□□ -0.84
CPSF4-213ENST00000484112 LACTB2Q53H82 288 aaPredicted RBP9.82□□□□□ -0.84
CPSF4-213ENST00000484112 FAM182AQ5T1J6 154 aa9.82□□□□□ -0.84
CPSF4-213ENST00000484112 HIST2H2BCQ6DN03 193 aa9.82□□□□□ -0.84
CPSF4-213ENST00000484112 CEACAM20Q6UY09 585 aa9.82□□□□□ -0.84
CPSF4-213ENST00000484112 SYDE1Q6ZW31 735 aaPredicted RBP9.82□□□□□ -0.84
CPSF4-213ENST00000484112 TIPARPQ7Z3E1 657 aaKnown RBP9.82□□□□□ -0.84
CPSF4-213ENST00000484112 SNX20Q7Z614 316 aa9.82□□□□□ -0.84
CPSF4-213ENST00000484112 ADGRG6Q86SQ4 1221 aa9.82□□□□□ -0.84
CPSF4-213ENST00000484112 TRIM74Q86UV6 250 aa9.82□□□□□ -0.84
CPSF4-213ENST00000484112 LRRTM4Q86VH4 590 aa9.82□□□□□ -0.84
CPSF4-213ENST00000484112 STARD8Q92502 1023 aa9.82□□□□□ -0.84
CPSF4-213ENST00000484112 NCSTNQ92542 709 aa9.82□□□□□ -0.84
CPSF4-213ENST00000484112 SGSM3Q96HU1 749 aa9.82□□□□□ -0.84
CPSF4-213ENST00000484112 MS4A14Q96JA4 679 aa9.82□□□□□ -0.84
CPSF4-213ENST00000484112 TTC25Q96NG3 672 aa9.82□□□□□ -0.84
CPSF4-213ENST00000484112 TEFMQ96QE5 360 aaKnown RBP9.82□□□□□ -0.84
CPSF4-213ENST00000484112 APOL2Q9BQE5 337 aa9.82□□□□□ -0.84
CPSF4-213ENST00000484112 IL22Q9GZX6 179 aa9.82□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms