RNA–Protein interactions for RNA: ENST00000483778.5

ATG4B-221, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 3

Gene ATG4B, Length 1,103 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-221ENST00000483778 TRHDEQ9UKU6 1024 aa17.63■□□□□ 0.41
ATG4B-221ENST00000483778 HACD1B0YJ81 288 aa17.62■□□□□ 0.41
ATG4B-221ENST00000483778 STX7O15400 261 aaKnown RBP17.62■□□□□ 0.41
ATG4B-221ENST00000483778 NR1D1P20393 614 aa17.62■□□□□ 0.41
ATG4B-221ENST00000483778 XIAPP98170 497 aa17.62■□□□□ 0.41
ATG4B-221ENST00000483778 OTUD4Q01804 1114 aaKnown RBP17.62■□□□□ 0.41
ATG4B-221ENST00000483778 ERV3-1Q14264 604 aa17.62■□□□□ 0.41
ATG4B-221ENST00000483778 IL11RAQ14626 422 aa17.62■□□□□ 0.41
ATG4B-221ENST00000483778 IGFBP7Q16270 282 aa17.62■□□□□ 0.41
ATG4B-221ENST00000483778 PWWP2BQ6NUJ5 590 aa17.62■□□□□ 0.41
ATG4B-221ENST00000483778 C11orf63Q6NUN7 778 aa17.62■□□□□ 0.41
ATG4B-221ENST00000483778 FBXO38Q6PIJ6 1188 aa17.62■□□□□ 0.41
ATG4B-221ENST00000483778 DAAM2Q86T65 1068 aa17.62■□□□□ 0.41
ATG4B-221ENST00000483778 ACTL9Q8TC94 416 aa17.62■□□□□ 0.41
ATG4B-221ENST00000483778 ZDHHC12Q96GR4 267 aa17.62■□□□□ 0.41
ATG4B-221ENST00000483778 TRIM5Q9C035 493 aa17.62■□□□□ 0.41
ATG4B-221ENST00000483778 EPN3Q9H201 632 aa17.62■□□□□ 0.41
ATG4B-221ENST00000483778 GBA3Q9H227 469 aa17.62■□□□□ 0.41
ATG4B-221ENST00000483778 FAM96AQ9H5X1 160 aa17.62■□□□□ 0.41
ATG4B-221ENST00000483778 FKBPLQ9UIM3 349 aa17.62■□□□□ 0.41
ATG4B-221ENST00000483778 REXO2Q9Y3B8 237 aaKnown RBP17.62■□□□□ 0.41
ATG4B-221ENST00000483778 PKP3Q9Y446 797 aa17.62■□□□□ 0.41
ATG4B-221ENST00000483778 KCNMB2Q9Y691 235 aa17.62■□□□□ 0.41
ATG4B-221ENST00000483778 NAV2Q8IVL1 2488 aa17.61■□□□□ 0.41
ATG4B-221ENST00000483778 APOC4-APOC2K7ER74 178 aa17.61■□□□□ 0.41
ATG4B-221ENST00000483778 CCL22O00626 93 aa17.61■□□□□ 0.41
ATG4B-221ENST00000483778 ARHGAP6O43182 974 aa17.61■□□□□ 0.41
ATG4B-221ENST00000483778 KCNJ13O60928 360 aa17.61■□□□□ 0.41
ATG4B-221ENST00000483778 KATNA1O75449 491 aa17.61■□□□□ 0.41
ATG4B-221ENST00000483778 SNRNP200O75643 2136 aaKnown RBP17.61■□□□□ 0.41
ATG4B-221ENST00000483778 APOC2P02655 101 aa17.61■□□□□ 0.41
ATG4B-221ENST00000483778 VCLP18206 1134 aa17.61■□□□□ 0.41
ATG4B-221ENST00000483778 LPOP22079 712 aaPredicted RBP17.61■□□□□ 0.41
ATG4B-221ENST00000483778 PSMB4P28070 264 aa17.61■□□□□ 0.41
ATG4B-221ENST00000483778 HALP42357 657 aa17.61■□□□□ 0.41
ATG4B-221ENST00000483778 ARCN1P48444 511 aaKnown RBP17.61■□□□□ 0.41
ATG4B-221ENST00000483778 XRCC4Q13426 336 aa17.61■□□□□ 0.41
ATG4B-221ENST00000483778 SPARCL1Q14515 664 aa17.61■□□□□ 0.41
ATG4B-221ENST00000483778 ANKRD20A2Q5SQ80 823 aa17.61■□□□□ 0.41
ATG4B-221ENST00000483778 ANKRD20A1Q5TYW2 823 aa17.61■□□□□ 0.41
ATG4B-221ENST00000483778 ANKRD20A3Q5VUR7 823 aa17.61■□□□□ 0.41
ATG4B-221ENST00000483778 ZDHHC20Q5W0Z9 365 aa17.61■□□□□ 0.41
ATG4B-221ENST00000483778 DENND5AQ6IQ26 1287 aa17.61■□□□□ 0.41
ATG4B-221ENST00000483778 FAM199XQ6PEV8 388 aaPredicted RBP17.61■□□□□ 0.41
ATG4B-221ENST00000483778 RBM12BQ8IXT5 1001 aaKnown RBP17.61■□□□□ 0.41
ATG4B-221ENST00000483778 OR13C4Q8NGS5 318 aa17.61■□□□□ 0.41
ATG4B-221ENST00000483778 APOBEC4Q8WW27 367 aaKnown RBP17.61■□□□□ 0.41
ATG4B-221ENST00000483778 RBM41Q96IZ5 413 aaKnown RBP17.61■□□□□ 0.41
ATG4B-221ENST00000483778 SLC41A2Q96JW4 573 aa17.61■□□□□ 0.41
ATG4B-221ENST00000483778 EFHD1Q9BUP0 239 aa17.61■□□□□ 0.41
ATG4B-221ENST00000483778 IMP3Q9NV31 184 aaKnown RBP17.61■□□□□ 0.41
ATG4B-221ENST00000483778 LNPEPQ9UIQ6 1025 aa17.61■□□□□ 0.41
ATG4B-221ENST00000483778 TUBD1Q9UJT1 453 aa17.61■□□□□ 0.41
ATG4B-221ENST00000483778 PCDHA3Q9Y5H8 950 aa17.61■□□□□ 0.41
ATG4B-221ENST00000483778 DNMT3AQ9Y6K1 912 aaPredicted RBP17.61■□□□□ 0.41
ATG4B-221ENST00000483778 SOWAHDA6NJG2 315 aa17.6■□□□□ 0.41
ATG4B-221ENST00000483778 DDX3YO15523 660 aaKnown RBP17.6■□□□□ 0.41
ATG4B-221ENST00000483778 PRAMEF1O95521 474 aa17.6■□□□□ 0.41
ATG4B-221ENST00000483778 NTRK1P04629 796 aa17.6■□□□□ 0.41
ATG4B-221ENST00000483778 POLBP06746 335 aa17.6■□□□□ 0.41
ATG4B-221ENST00000483778 EBLN1P0CF75 366 aa17.6■□□□□ 0.41
ATG4B-221ENST00000483778 MTHFD1P11586 935 aaKnown RBP17.6■□□□□ 0.41
ATG4B-221ENST00000483778 MSH3P20585 1137 aa17.6■□□□□ 0.41
ATG4B-221ENST00000483778 AKT1P31749 480 aa17.6■□□□□ 0.41
ATG4B-221ENST00000483778 CDKN1CP49918 316 aaPredicted RBP17.6■□□□□ 0.41
ATG4B-221ENST00000483778 GEMP55040 296 aa17.6■□□□□ 0.41
ATG4B-221ENST00000483778 TMPRSS15P98073 1019 aa17.6■□□□□ 0.41
ATG4B-221ENST00000483778 ITGA9Q13797 1035 aa17.6■□□□□ 0.41
ATG4B-221ENST00000483778 TAF1AQ15573 450 aaPredicted RBP17.6■□□□□ 0.41
ATG4B-221ENST00000483778 SARM1Q6SZW1 724 aa17.6■□□□□ 0.41
ATG4B-221ENST00000483778 C9orf43Q8TAL5 461 aaPredicted RBP17.6■□□□□ 0.41
ATG4B-221ENST00000483778 CCDC110Q8TBZ0 833 aa17.6■□□□□ 0.41
ATG4B-221ENST00000483778 CT55Q8WUE5 264 aa17.6■□□□□ 0.41
ATG4B-221ENST00000483778 ALG3Q92685 438 aa17.6■□□□□ 0.41
ATG4B-221ENST00000483778 FSD1LQ9BXM9 530 aa17.6■□□□□ 0.41
ATG4B-221ENST00000483778 LACRTQ9GZZ8 138 aa17.6■□□□□ 0.41
ATG4B-221ENST00000483778 ASB8Q9H765 288 aa17.6■□□□□ 0.41
ATG4B-221ENST00000483778 SMOXQ9NWM0 555 aa17.6■□□□□ 0.41
ATG4B-221ENST00000483778 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP17.6■□□□□ 0.41
ATG4B-221ENST00000483778 GOLGA6L3A6NEY3 463 aa17.59■□□□□ 0.41
ATG4B-221ENST00000483778 MGAT4DA6NG13 374 aa17.59■□□□□ 0.41
ATG4B-221ENST00000483778 SRP72O76094 671 aaKnown RBP17.59■□□□□ 0.41
ATG4B-221ENST00000483778 PRSS56P0CW18 603 aa17.59■□□□□ 0.41
ATG4B-221ENST00000483778 CTNNA1P35221 906 aaKnown RBP17.59■□□□□ 0.41
ATG4B-221ENST00000483778 TNNT3P45378 269 aaPredicted RBP17.59■□□□□ 0.41
ATG4B-221ENST00000483778 EIF3EP60228 445 aaKnown RBP17.59■□□□□ 0.41
ATG4B-221ENST00000483778 LARP7Q4G0J3 582 aaKnown RBP eCLIP17.59■□□□□ 0.41
ATG4B-221ENST00000483778 CRTC2Q53ET0 693 aaPredicted RBP17.59■□□□□ 0.41
ATG4B-221ENST00000483778 PPP1R3BQ86XI6 285 aa17.59■□□□□ 0.41
ATG4B-221ENST00000483778 CCDC170Q8IYT3 715 aa17.59■□□□□ 0.41
ATG4B-221ENST00000483778 SIDT2Q8NBJ9 832 aaKnown RBP17.59■□□□□ 0.41
ATG4B-221ENST00000483778 STAMBPL1Q96FJ0 436 aa17.59■□□□□ 0.41
ATG4B-221ENST00000483778 RMDN2Q96LZ7 410 aa17.59■□□□□ 0.41
ATG4B-221ENST00000483778 C12orf66Q96MD2 445 aa17.59■□□□□ 0.41
ATG4B-221ENST00000483778 OSBPL8Q9BZF1 889 aa17.59■□□□□ 0.41
ATG4B-221ENST00000483778 ZCCHC2Q9C0B9 1178 aaKnown RBP17.59■□□□□ 0.41
ATG4B-221ENST00000483778 HRASLS2Q9NWW9 162 aa17.59■□□□□ 0.41
ATG4B-221ENST00000483778 PADI1Q9ULC6 663 aa17.59■□□□□ 0.41
ATG4B-221ENST00000483778 EPN1Q9Y6I3 576 aaPredicted RBP17.59■□□□□ 0.41
ATG4B-221ENST00000483778 MAST4O15021 2626 aa17.58■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms