RNA–Protein interactions for RNA: ENST00000483409.1

SSR1-208, Transcript of signal sequence receptor subunit 1, humanhuman

TSL 4

Gene SSR1, Length 570 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-208ENST00000483409 AHCYL2Q96HN2 611 aaKnown RBP13.13□□□□□ -0.31
SSR1-208ENST00000483409 SGSM3Q96HU1 749 aa13.13□□□□□ -0.31
SSR1-208ENST00000483409 TTC1Q99614 292 aa13.13□□□□□ -0.31
SSR1-208ENST00000483409 CCM2Q9BSQ5 444 aa13.13□□□□□ -0.31
SSR1-208ENST00000483409 TBC1D10AQ9BXI6 508 aa13.13□□□□□ -0.31
SSR1-208ENST00000483409 WWP1Q9H0M0 922 aa13.13□□□□□ -0.31
SSR1-208ENST00000483409 CCDC86Q9H6F5 360 aaKnown RBP13.13□□□□□ -0.31
SSR1-208ENST00000483409 VPS37BQ9H9H4 285 aa13.13□□□□□ -0.31
SSR1-208ENST00000483409 EPB41L5Q9HCM4 733 aa13.13□□□□□ -0.31
SSR1-208ENST00000483409 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.13□□□□□ -0.31
SSR1-208ENST00000483409 ANAPC5Q9UJX4 755 aa13.13□□□□□ -0.31
SSR1-208ENST00000483409 SATB2Q9UPW6 733 aa13.13□□□□□ -0.31
SSR1-208ENST00000483409 CFAP20Q9Y6A4 193 aaKnown RBP13.13□□□□□ -0.31
SSR1-208ENST00000483409 AK5Q9Y6K8 562 aa13.13□□□□□ -0.31
SSR1-208ENST00000483409 A0A1W2PNU3 283 aaPredicted RBP13.12□□□□□ -0.31
SSR1-208ENST00000483409 PMS2P1A4D2B8 440 aa13.12□□□□□ -0.31
SSR1-208ENST00000483409 KLHL33A6NCF5 533 aa13.12□□□□□ -0.31
SSR1-208ENST00000483409 SDR42E2A6NKP2 422 aa13.12□□□□□ -0.31
SSR1-208ENST00000483409 DUX1O43812 170 aa13.12□□□□□ -0.31
SSR1-208ENST00000483409 AP2A2O94973 939 aa13.12□□□□□ -0.31
SSR1-208ENST00000483409 VAPBO95292 243 aa13.12□□□□□ -0.31
SSR1-208ENST00000483409 CPNE6O95741 557 aa13.12□□□□□ -0.31
SSR1-208ENST00000483409 IVDP26440 423 aa13.12□□□□□ -0.31
SSR1-208ENST00000483409 INHBCP55103 352 aa13.12□□□□□ -0.31
SSR1-208ENST00000483409 GABREP78334 506 aa13.12□□□□□ -0.31
SSR1-208ENST00000483409 GPLD1P80108 840 aa13.12□□□□□ -0.31
SSR1-208ENST00000483409 CFHR1Q03591 330 aa13.12□□□□□ -0.31
SSR1-208ENST00000483409 C2orf54Q08AI8 447 aa13.12□□□□□ -0.31
SSR1-208ENST00000483409 DHX34Q14147 1143 aaKnown RBP13.12□□□□□ -0.31
SSR1-208ENST00000483409 RPE65Q16518 533 aa13.12□□□□□ -0.31
SSR1-208ENST00000483409 AARS2Q5JTZ9 985 aaKnown RBP13.12□□□□□ -0.31
SSR1-208ENST00000483409 PHF19Q5T6S3 580 aa13.12□□□□□ -0.31
SSR1-208ENST00000483409 DUS1LQ6P1R4 473 aaKnown RBP13.12□□□□□ -0.31
SSR1-208ENST00000483409 FOXR1Q6PIV2 292 aa13.12□□□□□ -0.31
SSR1-208ENST00000483409 CERS6Q6ZMG9 384 aa13.12□□□□□ -0.31
SSR1-208ENST00000483409 TMEM26Q6ZUK4 368 aa13.12□□□□□ -0.31
SSR1-208ENST00000483409 PCGF5Q86SE9 256 aa13.12□□□□□ -0.31
SSR1-208ENST00000483409 PIM3Q86V86 326 aa13.12□□□□□ -0.31
SSR1-208ENST00000483409 SPATA4Q8NEY3 305 aa13.12□□□□□ -0.31
SSR1-208ENST00000483409 SPDYE1Q8NFV5 336 aaPredicted RBP13.12□□□□□ -0.31
SSR1-208ENST00000483409 OR10G6Q8NH81 332 aa13.12□□□□□ -0.31
SSR1-208ENST00000483409 ZNF669Q96BR6 464 aaPredicted RBP13.12□□□□□ -0.31
SSR1-208ENST00000483409 RMDN2Q96LZ7 410 aa13.12□□□□□ -0.31
SSR1-208ENST00000483409 C12orf66Q96MD2 445 aa13.12□□□□□ -0.31
SSR1-208ENST00000483409 TMEM74Q96NL1 305 aa13.12□□□□□ -0.31
SSR1-208ENST00000483409 TRIM31Q9BZY9 425 aa13.12□□□□□ -0.31
SSR1-208ENST00000483409 NRSN2Q9GZP1 204 aa13.12□□□□□ -0.31
SSR1-208ENST00000483409 SEMA6CQ9H3T2 930 aa13.12□□□□□ -0.31
SSR1-208ENST00000483409 COG4Q9H9E3 785 aa13.12□□□□□ -0.31
SSR1-208ENST00000483409 POT1Q9NUX5 634 aa13.12□□□□□ -0.31
SSR1-208ENST00000483409 IMP3Q9NV31 184 aaKnown RBP13.12□□□□□ -0.31
SSR1-208ENST00000483409 IL1RAPL1Q9NZN1 696 aa13.12□□□□□ -0.31
SSR1-208ENST00000483409 ACSL5Q9ULC5 683 aa13.12□□□□□ -0.31
SSR1-208ENST00000483409 MAD1L1Q9Y6D9 718 aa13.12□□□□□ -0.31
SSR1-208ENST00000483409 ACACAQ13085 2346 aa13.12□□□□□ -0.31
SSR1-208ENST00000483409 TMEM8BA6NDV4 472 aa13.11□□□□□ -0.31
SSR1-208ENST00000483409 LILRA5A6NI73 299 aa13.11□□□□□ -0.31
SSR1-208ENST00000483409 BRINP1O60477 761 aa13.11□□□□□ -0.31
SSR1-208ENST00000483409 BANF1O75531 89 aa13.11□□□□□ -0.31
SSR1-208ENST00000483409 SLC35G4P0C7Q5 338 aa13.11□□□□□ -0.31
SSR1-208ENST00000483409 MTHFD1P11586 935 aaKnown RBP13.11□□□□□ -0.31
SSR1-208ENST00000483409 HOXB3P14651 431 aaPredicted RBP13.11□□□□□ -0.31
SSR1-208ENST00000483409 ITGB6P18564 788 aa13.11□□□□□ -0.31
SSR1-208ENST00000483409 PAMP19021 973 aa13.11□□□□□ -0.31
SSR1-208ENST00000483409 MPSTP25325 297 aa13.11□□□□□ -0.31
SSR1-208ENST00000483409 PREPP48147 710 aa13.11□□□□□ -0.31
SSR1-208ENST00000483409 TTPAP49638 278 aa13.11□□□□□ -0.31
SSR1-208ENST00000483409 RTP5Q14D33 572 aa13.11□□□□□ -0.31
SSR1-208ENST00000483409 ANKRD20A4Q4UJ75 823 aa13.11□□□□□ -0.31
SSR1-208ENST00000483409 ZNF658BQ4V348 819 aaPredicted RBP13.11□□□□□ -0.31
SSR1-208ENST00000483409 KIAA0930Q6ICG6 404 aaPredicted RBP13.11□□□□□ -0.31
SSR1-208ENST00000483409 ZNF574Q6ZN55 896 aaPredicted RBP13.11□□□□□ -0.31
SSR1-208ENST00000483409 HOOK3Q86VS8 718 aa13.11□□□□□ -0.31
SSR1-208ENST00000483409 SLITRK4Q8IW52 837 aa13.11□□□□□ -0.31
SSR1-208ENST00000483409 JPH3Q8WXH2 748 aaPredicted RBP13.11□□□□□ -0.31
SSR1-208ENST00000483409 ELMO1Q92556 727 aa13.11□□□□□ -0.31
SSR1-208ENST00000483409 TRIM44Q96DX7 344 aaPredicted RBP13.11□□□□□ -0.31
SSR1-208ENST00000483409 FCRL3Q96P31 734 aaPredicted RBP13.11□□□□□ -0.31
SSR1-208ENST00000483409 INSM2Q96T92 566 aaPredicted RBP13.11□□□□□ -0.31
SSR1-208ENST00000483409 LDHAL6BQ9BYZ2 381 aaPredicted RBP13.11□□□□□ -0.31
SSR1-208ENST00000483409 STRADBQ9C0K7 418 aa13.11□□□□□ -0.31
SSR1-208ENST00000483409 TMEM9Q9P0T7 183 aa13.11□□□□□ -0.31
SSR1-208ENST00000483409 RPS6KL1Q9Y6S9 549 aa13.11□□□□□ -0.31
SSR1-208ENST00000483409 APC2O95996 2303 aa13.11□□□□□ -0.31
SSR1-208ENST00000483409 CCDC187A0A096LP49 1063 aa13.1□□□□□ -0.31
SSR1-208ENST00000483409 IGHV5-10-1A0A0J9YXX1 117 aa13.1□□□□□ -0.31
SSR1-208ENST00000483409 C17orf113A0A1B0GUU1 675 aa13.1□□□□□ -0.31
SSR1-208ENST00000483409 FAM237BA0A1B0GVD1 139 aa13.1□□□□□ -0.31
SSR1-208ENST00000483409 UBA6A0AVT1 1052 aaPredicted RBP13.1□□□□□ -0.31
SSR1-208ENST00000483409 QSOX1O00391 747 aa13.1□□□□□ -0.31
SSR1-208ENST00000483409 NDUFS3O75489 264 aa13.1□□□□□ -0.31
SSR1-208ENST00000483409 FTH1P02794 183 aa13.1□□□□□ -0.31
SSR1-208ENST00000483409 CAPNS1P04632 268 aa13.1□□□□□ -0.31
SSR1-208ENST00000483409 OR56A5P0C7T3 313 aa13.1□□□□□ -0.31
SSR1-208ENST00000483409 TYRP1P17643 537 aa13.1□□□□□ -0.31
SSR1-208ENST00000483409 CCKBRP32239 447 aa13.1□□□□□ -0.31
SSR1-208ENST00000483409 PPARGP37231 505 aaPredicted RBP13.1□□□□□ -0.31
SSR1-208ENST00000483409 ARCN1P48444 511 aaKnown RBP13.1□□□□□ -0.31
SSR1-208ENST00000483409 EPHA4P54764 986 aa13.1□□□□□ -0.31
SSR1-208ENST00000483409 ZFP36L1Q07352 338 aaKnown RBP13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 136.6 ms