RNA–Protein interactions for RNA: ENST00000482217.1

VPS41-212, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 5

Gene VPS41, Length 951 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-212ENST00000482217 SPP2Q13103 211 aa4.1□□□□□ -1.75
VPS41-212ENST00000482217 SCGB2A2Q13296 93 aa4.1□□□□□ -1.75
VPS41-212ENST00000482217 PPIGQ13427 754 aaKnown RBP eCLIP4.1□□□□□ -1.75
VPS41-212ENST00000482217 TSTA3Q13630 321 aaPredicted RBP4.1□□□□□ -1.75
VPS41-212ENST00000482217 ATP1A4Q13733 1029 aa4.1□□□□□ -1.75
VPS41-212ENST00000482217 LPIN1Q14693 890 aa4.1□□□□□ -1.75
VPS41-212ENST00000482217 RFTN1Q14699 578 aaPredicted RBP4.1□□□□□ -1.75
VPS41-212ENST00000482217 TXNRD1Q16881 649 aa4.1□□□□□ -1.75
VPS41-212ENST00000482217 Q3ZCU0 254 aa4.1□□□□□ -1.75
VPS41-212ENST00000482217 GPAT3Q53EU6 434 aa4.1□□□□□ -1.75
VPS41-212ENST00000482217 LRRC23Q53EV4 343 aaPredicted RBP4.1□□□□□ -1.75
VPS41-212ENST00000482217 CFAP157Q5JU67 520 aa4.1□□□□□ -1.75
VPS41-212ENST00000482217 CDC73Q6P1J9 531 aa4.1□□□□□ -1.75
VPS41-212ENST00000482217 ERICH5Q6P6B1 374 aa4.1□□□□□ -1.75
VPS41-212ENST00000482217 Q6YL49 198 aa4.1□□□□□ -1.75
VPS41-212ENST00000482217 WDR88Q6ZMY6 472 aa4.1□□□□□ -1.75
VPS41-212ENST00000482217 PARS2Q7L3T8 475 aaKnown RBP4.1□□□□□ -1.75
VPS41-212ENST00000482217 MAVSQ7Z434 540 aa4.1□□□□□ -1.75
VPS41-212ENST00000482217 CAMKMTQ7Z624 323 aa4.1□□□□□ -1.75
VPS41-212ENST00000482217 TPRA1Q86W33 373 aa4.1□□□□□ -1.75
VPS41-212ENST00000482217 CSGALNACT2Q8N6G5 542 aa4.1□□□□□ -1.75
VPS41-212ENST00000482217 PLD5Q8N7P1 536 aa4.1□□□□□ -1.75
VPS41-212ENST00000482217 ANKRD44Q8N8A2 993 aa4.1□□□□□ -1.75
VPS41-212ENST00000482217 BHLHE23Q8NDY6 225 aa4.1□□□□□ -1.75
VPS41-212ENST00000482217 OR7G3Q8NG95 312 aa4.1□□□□□ -1.75
VPS41-212ENST00000482217 SLC22A8Q8TCC7 542 aa4.1□□□□□ -1.75
VPS41-212ENST00000482217 SLC26A7Q8TE54 656 aa4.1□□□□□ -1.75
VPS41-212ENST00000482217 HMGB4Q8WW32 186 aa4.1□□□□□ -1.75
VPS41-212ENST00000482217 APBB2Q92870 758 aa4.1□□□□□ -1.75
VPS41-212ENST00000482217 GLG1Q92896 1179 aa4.1□□□□□ -1.75
VPS41-212ENST00000482217 PTERQ96BW5 349 aa4.1□□□□□ -1.75
VPS41-212ENST00000482217 C7orf34Q96L11 122 aa4.1□□□□□ -1.75
VPS41-212ENST00000482217 ZNF560Q96MR9 790 aa4.1□□□□□ -1.75
VPS41-212ENST00000482217 KIFC3Q9BVG8 833 aa4.1□□□□□ -1.75
VPS41-212ENST00000482217 SF3B5Q9BWJ5 86 aaKnown RBP4.1□□□□□ -1.75
VPS41-212ENST00000482217 BBS2Q9BXC9 721 aa4.1□□□□□ -1.75
VPS41-212ENST00000482217 CRNKL1Q9BZJ0 848 aaKnown RBP4.1□□□□□ -1.75
VPS41-212ENST00000482217 RTN4RQ9BZR6 473 aa4.1□□□□□ -1.75
VPS41-212ENST00000482217 EGLN1Q9GZT9 426 aa4.1□□□□□ -1.75
VPS41-212ENST00000482217 SLC26A1Q9H2B4 701 aa4.1□□□□□ -1.75
VPS41-212ENST00000482217 IKZF4Q9H2S9 585 aa4.1□□□□□ -1.75
VPS41-212ENST00000482217 PNNQ9H307 717 aaKnown RBP4.1□□□□□ -1.75
VPS41-212ENST00000482217 GOLPH3LQ9H4A5 285 aa4.1□□□□□ -1.75
VPS41-212ENST00000482217 ECT2Q9H8V3 914 aa4.1□□□□□ -1.75
VPS41-212ENST00000482217 USP29Q9HBJ7 922 aa4.1□□□□□ -1.75
VPS41-212ENST00000482217 TUBG2Q9NRH3 451 aa4.1□□□□□ -1.75
VPS41-212ENST00000482217 AGPAT5Q9NUQ2 364 aa4.1□□□□□ -1.75
VPS41-212ENST00000482217 ARL8BQ9NVJ2 186 aa4.1□□□□□ -1.75
VPS41-212ENST00000482217 CWC15Q9P013 229 aaKnown RBP4.1□□□□□ -1.75
VPS41-212ENST00000482217 TRPC4Q9UBN4 977 aa4.1□□□□□ -1.75
VPS41-212ENST00000482217 HDAC6Q9UBN7 1215 aa4.1□□□□□ -1.75
VPS41-212ENST00000482217 DDX25Q9UHL0 483 aaKnown RBP4.1□□□□□ -1.75
VPS41-212ENST00000482217 DRG1Q9Y295 367 aaKnown RBP4.1□□□□□ -1.75
VPS41-212ENST00000482217 PLEKHA6Q9Y2H5 1048 aa4.1□□□□□ -1.75
VPS41-212ENST00000482217 AP4B1Q9Y6B7 739 aa4.1□□□□□ -1.75
VPS41-212ENST00000482217 WDR33Q9C0J8 1336 aaKnown RBP4.1□□□□□ -1.75
VPS41-212ENST00000482217 KAT6AQ92794 2004 aa4.1□□□□□ -1.75
VPS41-212ENST00000482217 CYP3A7-CYP3A51PA0A087WV96 503 aa4.09□□□□□ -1.75
VPS41-212ENST00000482217 LOC100506127A0A0U1RQW1 187 aa4.09□□□□□ -1.75
VPS41-212ENST00000482217 A0A1B0GTQ1 180 aa4.09□□□□□ -1.75
VPS41-212ENST00000482217 C2orf92A0A1B0GVN3 265 aa4.09□□□□□ -1.75
VPS41-212ENST00000482217 TCRBV21S2A2A0A5A6 115 aa4.09□□□□□ -1.75
VPS41-212ENST00000482217 HEATR9A2RTY3 570 aa4.09□□□□□ -1.75
VPS41-212ENST00000482217 HTR3EA5X5Y0 456 aa4.09□□□□□ -1.75
VPS41-212ENST00000482217 CFAP73A6NFT4 308 aa4.09□□□□□ -1.75
VPS41-212ENST00000482217 OOEPA6NGQ2 149 aa4.09□□□□□ -1.75
VPS41-212ENST00000482217 CDRT15L2A8MXV6 281 aa4.09□□□□□ -1.75
VPS41-212ENST00000482217 VWC2LB2RUY7 222 aa4.09□□□□□ -1.75
VPS41-212ENST00000482217 ADM5C9JUS6 153 aa4.09□□□□□ -1.75
VPS41-212ENST00000482217 K7ERQ8 282 aa4.09□□□□□ -1.75
VPS41-212ENST00000482217 ZSCAN9O15535 394 aaPredicted RBP4.09□□□□□ -1.75
VPS41-212ENST00000482217 TTI1O43156 1089 aa4.09□□□□□ -1.75
VPS41-212ENST00000482217 AKR7A2O43488 359 aa4.09□□□□□ -1.75
VPS41-212ENST00000482217 CELF2O95319 508 aaKnown RBP4.09□□□□□ -1.75
VPS41-212ENST00000482217 VIPP01282 170 aa4.09□□□□□ -1.75
VPS41-212ENST00000482217 IL1BP01584 269 aa4.09□□□□□ -1.75
VPS41-212ENST00000482217 FGBP02675 491 aa4.09□□□□□ -1.75
VPS41-212ENST00000482217 KRT6BP04259 564 aa4.09□□□□□ -1.75
VPS41-212ENST00000482217 CHRM2P08172 466 aa4.09□□□□□ -1.75
VPS41-212ENST00000482217 IL6RP08887 468 aaPredicted RBP4.09□□□□□ -1.75
VPS41-212ENST00000482217 IQCF3P0C7M6 154 aa4.09□□□□□ -1.75
VPS41-212ENST00000482217 CYP19A1P11511 503 aaPredicted RBP4.09□□□□□ -1.75
VPS41-212ENST00000482217 ACP5P13686 325 aa4.09□□□□□ -1.75
VPS41-212ENST00000482217 HGFP14210 728 aa4.09□□□□□ -1.75
VPS41-212ENST00000482217 CDH2P19022 906 aaPredicted RBP4.09□□□□□ -1.75
VPS41-212ENST00000482217 CYP3A7P24462 503 aa4.09□□□□□ -1.75
VPS41-212ENST00000482217 U2AF2P26368 475 aaKnown RBP eCLIP4.09□□□□□ -1.752e-8■■■■□ 24.8
VPS41-212ENST00000482217 PRKAR2BP31323 418 aa4.09□□□□□ -1.75
VPS41-212ENST00000482217 HTR7P34969 479 aa4.09□□□□□ -1.75
VPS41-212ENST00000482217 LIPAP38571 399 aa4.09□□□□□ -1.75
VPS41-212ENST00000482217 FRKP42685 505 aaPredicted RBP4.09□□□□□ -1.75
VPS41-212ENST00000482217 MAGEA1P43355 309 aa4.09□□□□□ -1.75
VPS41-212ENST00000482217 CDKN1BP46527 198 aa4.09□□□□□ -1.75
VPS41-212ENST00000482217 PCP4P48539 62 aa4.09□□□□□ -1.75
VPS41-212ENST00000482217 KRT6CP48668 564 aa4.09□□□□□ -1.75
VPS41-212ENST00000482217 CCT8P50990 548 aa4.09□□□□□ -1.75
VPS41-212ENST00000482217 INHBCP55103 352 aa4.09□□□□□ -1.75
VPS41-212ENST00000482217 PRMT2P55345 433 aa4.09□□□□□ -1.75
VPS41-212ENST00000482217 SNU13P55769 128 aaKnown RBP4.09□□□□□ -1.75
VPS41-212ENST00000482217 FAM3BP58499 235 aaPredicted RBP4.09□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms