RNA–Protein interactions for RNA: ENST00000481999.1

CHD3-211, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 2,515 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-211ENST00000481999 INHBCP55103 352 aa14.25□□□□□ -0.13
CHD3-211ENST00000481999 IL2P60568 153 aa14.25□□□□□ -0.13
CHD3-211ENST00000481999 ILF2Q12905 390 aaKnown RBP14.25□□□□□ -0.13
CHD3-211ENST00000481999 UGT3A2Q3SY77 523 aa14.25□□□□□ -0.13
CHD3-211ENST00000481999 ARSIQ5FYB1 569 aa14.25□□□□□ -0.13
CHD3-211ENST00000481999 MBOAT1Q6ZNC8 495 aa14.25□□□□□ -0.13
CHD3-211ENST00000481999 SPATA24Q86W54 205 aa14.25□□□□□ -0.13
CHD3-211ENST00000481999 NXPE3Q969Y0 559 aa14.25□□□□□ -0.13
CHD3-211ENST00000481999 SCRN2Q96FV2 425 aa14.25□□□□□ -0.13
CHD3-211ENST00000481999 MRGPRX3Q96LB0 322 aa14.25□□□□□ -0.13
CHD3-211ENST00000481999 CLPBQ9H078 707 aa14.25□□□□□ -0.13
CHD3-211ENST00000481999 TUBB1Q9H4B7 451 aa14.25□□□□□ -0.13
CHD3-211ENST00000481999 SYTL2Q9HCH5 934 aa14.25□□□□□ -0.13
CHD3-211ENST00000481999 FAM8A1Q9UBU6 413 aa14.25□□□□□ -0.13
CHD3-211ENST00000481999 PCDHGA7Q9Y5G6 932 aa14.25□□□□□ -0.13
CHD3-211ENST00000481999 TCF20Q9UGU0 1960 aaKnown RBP14.25□□□□□ -0.13
CHD3-211ENST00000481999 SMIM31A0A1B0GVY4 71 aa14.24□□□□□ -0.13
CHD3-211ENST00000481999 GPC4O75487 556 aa14.24□□□□□ -0.13
CHD3-211ENST00000481999 CAPNS1P04632 268 aa14.24□□□□□ -0.13
CHD3-211ENST00000481999 C1SP09871 688 aa14.24□□□□□ -0.13
CHD3-211ENST00000481999 ACRV1P26436 265 aa14.24□□□□□ -0.13
CHD3-211ENST00000481999 B4GALNT1Q00973 533 aa14.24□□□□□ -0.13
CHD3-211ENST00000481999 FASTKQ14296 549 aaKnown RBP14.24□□□□□ -0.13
CHD3-211ENST00000481999 ELMSAN1Q6PJG2 1045 aa14.24□□□□□ -0.13
CHD3-211ENST00000481999 SNX20Q7Z614 316 aa14.24□□□□□ -0.13
CHD3-211ENST00000481999 LILRA2Q8N149 483 aa14.24□□□□□ -0.13
CHD3-211ENST00000481999 OR52B6Q8NGF0 335 aa14.24□□□□□ -0.13
CHD3-211ENST00000481999 RHEBL1Q8TAI7 183 aa14.24□□□□□ -0.13
CHD3-211ENST00000481999 NCSTNQ92542 709 aa14.24□□□□□ -0.13
CHD3-211ENST00000481999 POPDC3Q9HBV1 291 aa14.24□□□□□ -0.13
CHD3-211ENST00000481999 DUS2Q9NX74 493 aaKnown RBP14.24□□□□□ -0.13
CHD3-211ENST00000481999 NDUFA13Q9P0J0 144 aa14.24□□□□□ -0.13
CHD3-211ENST00000481999 TMPRSS11EQ9UL52 423 aa14.24□□□□□ -0.13
CHD3-211ENST00000481999 ERVW-1Q9UQF0 538 aa14.24□□□□□ -0.13
CHD3-211ENST00000481999 WASH3PC4AMC7 463 aa14.24□□□□□ -0.13
CHD3-211ENST00000481999 PRRT4C9JH25 899 aa14.24□□□□□ -0.13
CHD3-211ENST00000481999 PLK4O00444 970 aa14.24□□□□□ -0.13
CHD3-211ENST00000481999 ESR1P03372 595 aa14.24□□□□□ -0.13
CHD3-211ENST00000481999 PYGLP06737 847 aa14.24□□□□□ -0.13
CHD3-211ENST00000481999 ATXN3P54252 364 aaPredicted RBP14.24□□□□□ -0.13
CHD3-211ENST00000481999 NFKB2Q00653 900 aa14.24□□□□□ -0.13
CHD3-211ENST00000481999 TRIM25Q14258 630 aaKnown RBP14.24□□□□□ -0.13
CHD3-211ENST00000481999 TGFBIQ15582 683 aa14.24□□□□□ -0.13
CHD3-211ENST00000481999 FAM78AQ5JUQ0 283 aa14.24□□□□□ -0.13
CHD3-211ENST00000481999 FRS2Q8WU20 508 aa14.24□□□□□ -0.13
CHD3-211ENST00000481999 ACOX2Q99424 681 aa14.24□□□□□ -0.13
CHD3-211ENST00000481999 PKP2Q99959 881 aa14.24□□□□□ -0.13
CHD3-211ENST00000481999 CACNA2D2Q9NY47 1150 aa14.24□□□□□ -0.13
CHD3-211ENST00000481999 CCDC167Q9P0B6 97 aa14.24□□□□□ -0.13
CHD3-211ENST00000481999 SARDHQ9UL12 918 aa14.24□□□□□ -0.13
CHD3-211ENST00000481999 PIP5K1BO14986 540 aa14.23□□□□□ -0.13
CHD3-211ENST00000481999 ALDOCP09972 364 aaKnown RBP14.23□□□□□ -0.13
CHD3-211ENST00000481999 LINC00032P0C843 101 aa14.23□□□□□ -0.13
CHD3-211ENST00000481999 POLR2EP19388 210 aaKnown RBP14.23□□□□□ -0.13
CHD3-211ENST00000481999 ITGALP20701 1170 aa14.23□□□□□ -0.13
CHD3-211ENST00000481999 SPAM1P38567 509 aa14.23□□□□□ -0.13
CHD3-211ENST00000481999 GRIA2P42262 883 aa14.23□□□□□ -0.13
CHD3-211ENST00000481999 GDF5P43026 501 aa14.23□□□□□ -0.13
CHD3-211ENST00000481999 CLCQ05315 142 aa14.23□□□□□ -0.13
CHD3-211ENST00000481999 PHKG1Q16816 387 aa14.23□□□□□ -0.13
CHD3-211ENST00000481999 AGKQ53H12 422 aa14.23□□□□□ -0.13
CHD3-211ENST00000481999 TPRG1Q6ZUI0 275 aa14.23□□□□□ -0.13
CHD3-211ENST00000481999 PBXIP1Q96AQ6 731 aa14.23□□□□□ -0.13
CHD3-211ENST00000481999 SLC25A23Q9BV35 468 aa14.23□□□□□ -0.13
CHD3-211ENST00000481999 PBX4Q9BYU1 374 aa14.23□□□□□ -0.13
CHD3-211ENST00000481999 CD274Q9NZQ7 290 aa14.23□□□□□ -0.13
CHD3-211ENST00000481999 AP4B1Q9Y6B7 739 aa14.23□□□□□ -0.13
CHD3-211ENST00000481999 PLXNB3Q9ULL4 1909 aa14.23□□□□□ -0.13
CHD3-211ENST00000481999 SNRPB2P08579 225 aaKnown RBP14.23□□□□□ -0.13
CHD3-211ENST00000481999 TCN1P20061 433 aaPredicted RBP14.23□□□□□ -0.13
CHD3-211ENST00000481999 CSNK1DP48730 415 aa14.23□□□□□ -0.13
CHD3-211ENST00000481999 LRP8Q14114 963 aa14.23□□□□□ -0.13
CHD3-211ENST00000481999 AARS2Q5JTZ9 985 aaKnown RBP14.23□□□□□ -0.13
CHD3-211ENST00000481999 SBSNQ6UWP8 590 aa14.23□□□□□ -0.13
CHD3-211ENST00000481999 Q6ZVL8 140 aa14.23□□□□□ -0.13
CHD3-211ENST00000481999 GET4Q7L5D6 327 aaPredicted RBP14.23□□□□□ -0.13
CHD3-211ENST00000481999 NPAS3Q8IXF0 933 aa14.23□□□□□ -0.13
CHD3-211ENST00000481999 DDIASQ8IXT1 998 aa14.23□□□□□ -0.13
CHD3-211ENST00000481999 PCDH20Q8N6Y1 951 aaKnown RBP14.23□□□□□ -0.13
CHD3-211ENST00000481999 EPB41L1Q9H4G0 881 aa14.23□□□□□ -0.13
CHD3-211ENST00000481999 NSUN3Q9H649 340 aaKnown RBP14.23□□□□□ -0.13
CHD3-211ENST00000481999 SPAG4Q9NPE6 437 aa14.23□□□□□ -0.13
CHD3-211ENST00000481999 CNOT11Q9UKZ1 510 aaKnown RBP14.23□□□□□ -0.13
CHD3-211ENST00000481999 COMMD3-BMI1R4GMX3 469 aa14.23□□□□□ -0.13
CHD3-211ENST00000481999 E7ENX8 843 aa14.22□□□□□ -0.13
CHD3-211ENST00000481999 TULP3O75386 442 aa14.22□□□□□ -0.13
CHD3-211ENST00000481999 POP4O95707 220 aaKnown RBP14.22□□□□□ -0.13
CHD3-211ENST00000481999 HNRNPA1P09651 372 aaKnown RBP eCLIP14.22□□□□□ -0.13
CHD3-211ENST00000481999 HOXB8P17481 243 aaPredicted RBP14.22□□□□□ -0.13
CHD3-211ENST00000481999 DDX6P26196 483 aaKnown RBP eCLIP14.22□□□□□ -0.13
CHD3-211ENST00000481999 HOXA9P31269 272 aa14.22□□□□□ -0.13
CHD3-211ENST00000481999 ETV3P41162 512 aa14.22□□□□□ -0.13
CHD3-211ENST00000481999 UBE3AQ05086 875 aa14.22□□□□□ -0.13
CHD3-211ENST00000481999 GRB7Q14451 532 aa14.22□□□□□ -0.13
CHD3-211ENST00000481999 GRIN2CQ14957 1233 aa14.22□□□□□ -0.13
CHD3-211ENST00000481999 REP15Q6BDI9 236 aa14.22□□□□□ -0.13
CHD3-211ENST00000481999 SERPINA13PQ6UXR4 307 aa14.22□□□□□ -0.13
CHD3-211ENST00000481999 GDPD4Q6W3E5 623 aa14.22□□□□□ -0.13
CHD3-211ENST00000481999 USP45Q70EL2 814 aa14.22□□□□□ -0.13
CHD3-211ENST00000481999 HSD11B1LQ7Z5J1 315 aa14.22□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms