RNA–Protein interactions for RNA: ENST00000480237.1

LINC00173-203, long intergenic non-protein coding RNA 173, humanhuman

TSL 2 BASIC

Gene LINC00173, Length 1,597 nt, Biotype lincRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00173-203ENST00000480237 GTF2H3Q13889 308 aa10.28□□□□□ -0.76
LINC00173-203ENST00000480237 BOP1Q14137 746 aaKnown RBP10.28□□□□□ -0.76
LINC00173-203ENST00000480237 RCN2Q14257 317 aa10.28□□□□□ -0.76
LINC00173-203ENST00000480237 TSNQ15631 228 aaKnown RBP10.28□□□□□ -0.76
LINC00173-203ENST00000480237 KHDC1Q4VXA5 237 aaKnown RBP10.28□□□□□ -0.76
LINC00173-203ENST00000480237 CFAP157Q5JU67 520 aa10.28□□□□□ -0.76
LINC00173-203ENST00000480237 ZNF648Q5T619 568 aaPredicted RBP10.28□□□□□ -0.76
LINC00173-203ENST00000480237 VASH1Q7L8A9 365 aaPredicted RBP10.28□□□□□ -0.76
LINC00173-203ENST00000480237 PIGWQ7Z7B1 504 aa10.28□□□□□ -0.76
LINC00173-203ENST00000480237 ISCA2Q86U28 154 aa10.28□□□□□ -0.76
LINC00173-203ENST00000480237 SLC22A9Q8IVM8 553 aa10.28□□□□□ -0.76
LINC00173-203ENST00000480237 TMEM151AQ8N4L1 468 aa10.28□□□□□ -0.76
LINC00173-203ENST00000480237 CCNYL1Q8N7R7 359 aa10.28□□□□□ -0.76
LINC00173-203ENST00000480237 OR14C36Q8NHC7 312 aa10.28□□□□□ -0.76
LINC00173-203ENST00000480237 RHEBL1Q8TAI7 183 aa10.28□□□□□ -0.76
LINC00173-203ENST00000480237 EEF1AKMT1Q8WVE0 214 aa10.28□□□□□ -0.76
LINC00173-203ENST00000480237 KIAA1191Q96A73 305 aa10.28□□□□□ -0.76
LINC00173-203ENST00000480237 GATA5Q9BWX5 397 aaPredicted RBP10.28□□□□□ -0.76
LINC00173-203ENST00000480237 TFB2MQ9H5Q4 396 aaKnown RBP10.28□□□□□ -0.76
LINC00173-203ENST00000480237 ARHGEF3Q9NR81 526 aa10.28□□□□□ -0.76
LINC00173-203ENST00000480237 KLHL14Q9P2G3 628 aa10.28□□□□□ -0.76
LINC00173-203ENST00000480237 NCKAP1Q9Y2A7 1128 aa10.28□□□□□ -0.76
LINC00173-203ENST00000480237 COL6A3P12111 3177 aa10.28□□□□□ -0.76
LINC00173-203ENST00000480237 TCRBV21S2A2A0A5A6 115 aa10.27□□□□□ -0.76
LINC00173-203ENST00000480237 IGLON5A6NGN9 336 aa10.27□□□□□ -0.76
LINC00173-203ENST00000480237 OR2AG2A6NM03 316 aa10.27□□□□□ -0.76
LINC00173-203ENST00000480237 SYCE1LA8MT33 242 aa10.27□□□□□ -0.76
LINC00173-203ENST00000480237 K7ESM1 405 aa10.27□□□□□ -0.76
LINC00173-203ENST00000480237 CDC7O00311 574 aa10.27□□□□□ -0.76
LINC00173-203ENST00000480237 PLRG1O43660 514 aaKnown RBP10.27□□□□□ -0.76
LINC00173-203ENST00000480237 TSPAN12O95859 305 aa10.27□□□□□ -0.76
LINC00173-203ENST00000480237 SOD1P00441 154 aa10.27□□□□□ -0.76
LINC00173-203ENST00000480237 TPBGLP0DKB5 382 aa10.27□□□□□ -0.76
LINC00173-203ENST00000480237 ADPRHP54922 357 aa10.27□□□□□ -0.76
LINC00173-203ENST00000480237 VAC14Q08AM6 782 aa10.27□□□□□ -0.76
LINC00173-203ENST00000480237 LRRC32Q14392 662 aa10.27□□□□□ -0.76
LINC00173-203ENST00000480237 SYTL3Q4VX76 610 aa10.27□□□□□ -0.76
LINC00173-203ENST00000480237 SEL1L3Q68CR1 1132 aa10.27□□□□□ -0.76
LINC00173-203ENST00000480237 KIAA1161Q6NSJ0 714 aa10.27□□□□□ -0.76
LINC00173-203ENST00000480237 NAPRTQ6XQN6 538 aa10.27□□□□□ -0.76
LINC00173-203ENST00000480237 ZNF852Q6ZMS4 543 aa10.27□□□□□ -0.76
LINC00173-203ENST00000480237 PIWIL4Q7Z3Z4 852 aaKnown RBP10.27□□□□□ -0.76
LINC00173-203ENST00000480237 RAB44Q7Z6P3 723 aaPredicted RBP10.27□□□□□ -0.76
LINC00173-203ENST00000480237 ADAMTSL2Q86TH1 951 aa10.27□□□□□ -0.76
LINC00173-203ENST00000480237 TRIM74Q86UV6 250 aa10.27□□□□□ -0.76
LINC00173-203ENST00000480237 FAM124AQ86V42 546 aa10.27□□□□□ -0.76
LINC00173-203ENST00000480237 KBTBD6Q86V97 674 aa10.27□□□□□ -0.76
LINC00173-203ENST00000480237 PELI3Q8N2H9 469 aa10.27□□□□□ -0.76
LINC00173-203ENST00000480237 FLCNQ8NFG4 579 aa10.27□□□□□ -0.76
LINC00173-203ENST00000480237 STAG3L4Q8TBR4 150 aa10.27□□□□□ -0.76
LINC00173-203ENST00000480237 ELMO1Q92556 727 aa10.27□□□□□ -0.76
LINC00173-203ENST00000480237 ATOH8Q96SQ7 321 aa10.27□□□□□ -0.76
LINC00173-203ENST00000480237 ZNF395Q9H8N7 513 aaPredicted RBP10.27□□□□□ -0.76
LINC00173-203ENST00000480237 NCKIPSDQ9NZQ3 722 aa10.27□□□□□ -0.76
LINC00173-203ENST00000480237 MARCOQ9UEW3 520 aaPredicted RBP10.27□□□□□ -0.76
LINC00173-203ENST00000480237 FBXL21Q9UKT6 434 aa10.27□□□□□ -0.76
LINC00173-203ENST00000480237 FZD4Q9ULV1 537 aa10.27□□□□□ -0.76
LINC00173-203ENST00000480237 SORCS3Q9UPU3 1222 aa10.27□□□□□ -0.76
LINC00173-203ENST00000480237 ARL2BPQ9Y2Y0 163 aa10.27□□□□□ -0.76
LINC00173-203ENST00000480237 CCDC189A1A4V9 331 aa10.26□□□□□ -0.77
LINC00173-203ENST00000480237 SHISA7A6NL88 538 aa10.26□□□□□ -0.77
LINC00173-203ENST00000480237 KPNA5O15131 536 aa10.26□□□□□ -0.77
LINC00173-203ENST00000480237 ITM2AO43736 263 aa10.26□□□□□ -0.77
LINC00173-203ENST00000480237 RNGTTO60942 597 aaKnown RBP10.26□□□□□ -0.77
LINC00173-203ENST00000480237 ATG13O75143 517 aa10.26□□□□□ -0.77
LINC00173-203ENST00000480237 IPO13O94829 963 aaKnown RBP10.26□□□□□ -0.77
LINC00173-203ENST00000480237 S100BP04271 92 aaPredicted RBP10.26□□□□□ -0.77
LINC00173-203ENST00000480237 CBSLP0DN79 551 aa10.26□□□□□ -0.77
LINC00173-203ENST00000480237 KITP10721 976 aa10.26□□□□□ -0.77
LINC00173-203ENST00000480237 PBLDP30039 288 aaPredicted RBP10.26□□□□□ -0.77
LINC00173-203ENST00000480237 CBSP35520 551 aa10.26□□□□□ -0.77
LINC00173-203ENST00000480237 NAGLUP54802 743 aa10.26□□□□□ -0.77
LINC00173-203ENST00000480237 DNAJB13P59910 316 aa10.26□□□□□ -0.77
LINC00173-203ENST00000480237 RPS21P63220 83 aaKnown RBP10.26□□□□□ -0.77
LINC00173-203ENST00000480237 NFKB2Q00653 900 aa10.26□□□□□ -0.77
LINC00173-203ENST00000480237 PRKCQQ04759 706 aa10.26□□□□□ -0.77
LINC00173-203ENST00000480237 ZBTB16Q05516 673 aa10.26□□□□□ -0.77
LINC00173-203ENST00000480237 IRF4Q15306 451 aa10.26□□□□□ -0.77
LINC00173-203ENST00000480237 CRY1Q16526 586 aa10.26□□□□□ -0.77
LINC00173-203ENST00000480237 ACSBG2Q5FVE4 666 aa10.26□□□□□ -0.77
LINC00173-203ENST00000480237 FOXR1Q6PIV2 292 aa10.26□□□□□ -0.77
LINC00173-203ENST00000480237 Q6ZS52 159 aa10.26□□□□□ -0.77
LINC00173-203ENST00000480237 USP30Q70CQ3 517 aa10.26□□□□□ -0.77
LINC00173-203ENST00000480237 ADHFE1Q8IWW8 467 aa10.26□□□□□ -0.77
LINC00173-203ENST00000480237 FBXO39Q8N4B4 442 aa10.26□□□□□ -0.77
LINC00173-203ENST00000480237 BEND7Q8N7W2 519 aaPredicted RBP10.26□□□□□ -0.77
LINC00173-203ENST00000480237 PTGR2Q8N8N7 351 aaPredicted RBP10.26□□□□□ -0.77
LINC00173-203ENST00000480237 RASGEF1AQ8N9B8 481 aa10.26□□□□□ -0.77
LINC00173-203ENST00000480237 MAFAQ8NHW3 353 aaPredicted RBP10.26□□□□□ -0.77
LINC00173-203ENST00000480237 HMGB4Q8WW32 186 aa10.26□□□□□ -0.77
LINC00173-203ENST00000480237 KLK6Q92876 244 aa10.26□□□□□ -0.77
LINC00173-203ENST00000480237 PHF21BQ96EK2 531 aa10.26□□□□□ -0.77
LINC00173-203ENST00000480237 CDK15Q96Q40 435 aa10.26□□□□□ -0.77
LINC00173-203ENST00000480237 TMEM237Q96Q45 408 aa10.26□□□□□ -0.77
LINC00173-203ENST00000480237 PLCD4Q9BRC7 762 aa10.26□□□□□ -0.77
LINC00173-203ENST00000480237 C1QTNF7Q9BXJ2 289 aa10.26□□□□□ -0.77
LINC00173-203ENST00000480237 FAM126AQ9BYI3 521 aaPredicted RBP10.26□□□□□ -0.77
LINC00173-203ENST00000480237 PRDM6Q9NQX0 595 aa10.26□□□□□ -0.77
LINC00173-203ENST00000480237 ACSS2Q9NR19 701 aa10.26□□□□□ -0.77
LINC00173-203ENST00000480237 LATS2Q9NRM7 1088 aa10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms