RNA–Protein interactions for RNA: ENST00000479933.2

TNFRSF8-204, Transcript of TNF receptor superfamily member 8, humanhuman

TSL 1 (best)

Gene TNFRSF8, Length 2,120 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF8-204ENST00000479933 PNPLA3Q9NST1 481 aa18.89■□□□□ 0.62
TNFRSF8-204ENST00000479933 GIMAP2Q9UG22 337 aa18.89■□□□□ 0.62
TNFRSF8-204ENST00000479933 MYRFQ9Y2G1 1151 aa18.89■□□□□ 0.62
TNFRSF8-204ENST00000479933 DHRS7Q9Y394 339 aa18.89■□□□□ 0.62
TNFRSF8-204ENST00000479933 RNF11Q9Y3C5 154 aa18.89■□□□□ 0.62
TNFRSF8-204ENST00000479933 PCDHB9Q9Y5E1 797 aa18.89■□□□□ 0.62
TNFRSF8-204ENST00000479933 MICAL3Q7RTP6 2002 aa18.89■□□□□ 0.61
TNFRSF8-204ENST00000479933 A0A1W2PP18 115 aa18.89■□□□□ 0.61
TNFRSF8-204ENST00000479933 NCF1BA6NI72 391 aaPredicted RBP18.89■□□□□ 0.61
TNFRSF8-204ENST00000479933 NCF1CA8MVU1 366 aaPredicted RBP18.89■□□□□ 0.61
TNFRSF8-204ENST00000479933 NME4O00746 187 aa18.89■□□□□ 0.61
TNFRSF8-204ENST00000479933 PRMT5O14744 637 aaPredicted RBP18.89■□□□□ 0.61
TNFRSF8-204ENST00000479933 CNOT3O75175 753 aaKnown RBP18.89■□□□□ 0.61
TNFRSF8-204ENST00000479933 SULT1C4O75897 302 aa18.89■□□□□ 0.61
TNFRSF8-204ENST00000479933 NCF1P14598 390 aaPredicted RBP18.89■□□□□ 0.61
TNFRSF8-204ENST00000479933 MZF1P28698 734 aaPredicted RBP18.89■□□□□ 0.61
TNFRSF8-204ENST00000479933 AGTR2P50052 363 aa18.89■□□□□ 0.61
TNFRSF8-204ENST00000479933 ZBED5Q49AG3 693 aa18.89■□□□□ 0.61
TNFRSF8-204ENST00000479933 CYP2R1Q6VVX0 501 aa18.89■□□□□ 0.61
TNFRSF8-204ENST00000479933 ADAMTSL2Q86TH1 951 aa18.89■□□□□ 0.61
TNFRSF8-204ENST00000479933 CPNE9Q8IYJ1 553 aa18.89■□□□□ 0.61
TNFRSF8-204ENST00000479933 ZNF420Q8TAQ5 688 aaPredicted RBP18.89■□□□□ 0.61
TNFRSF8-204ENST00000479933 ADAMTS16Q8TE57 1224 aa18.89■□□□□ 0.61
TNFRSF8-204ENST00000479933 SLC39A3Q9BRY0 314 aa18.89■□□□□ 0.61
TNFRSF8-204ENST00000479933 VPS51Q9UID3 782 aa18.89■□□□□ 0.61
TNFRSF8-204ENST00000479933 DOLKQ9UPQ8 538 aa18.89■□□□□ 0.61
TNFRSF8-204ENST00000479933 TIMM22Q9Y584 194 aa18.89■□□□□ 0.61
TNFRSF8-204ENST00000479933 OR51B4Q9Y5P0 310 aa18.89■□□□□ 0.61
TNFRSF8-204ENST00000479933 SNX13Q9Y5W8 968 aa18.89■□□□□ 0.61
TNFRSF8-204ENST00000479933 TRIM64BA6NI03 449 aa18.88■□□□□ 0.61
TNFRSF8-204ENST00000479933 E2F3O00716 465 aa18.88■□□□□ 0.61
TNFRSF8-204ENST00000479933 OXSR1O95747 527 aaPredicted RBP18.88■□□□□ 0.61
TNFRSF8-204ENST00000479933 S100BP04271 92 aaPredicted RBP18.88■□□□□ 0.61
TNFRSF8-204ENST00000479933 CLCN7P51798 805 aa18.88■□□□□ 0.61
TNFRSF8-204ENST00000479933 EPHB3P54753 998 aa18.88■□□□□ 0.61
TNFRSF8-204ENST00000479933 ERVK-8P63133 956 aa18.88■□□□□ 0.61
TNFRSF8-204ENST00000479933 RCAN2Q14206 197 aa18.88■□□□□ 0.61
TNFRSF8-204ENST00000479933 RETSATQ6NUM9 610 aa18.88■□□□□ 0.61
TNFRSF8-204ENST00000479933 LRTOMTQ8WZ04 291 aa18.88■□□□□ 0.61
TNFRSF8-204ENST00000479933 MYO19Q96H55 970 aa18.88■□□□□ 0.61
TNFRSF8-204ENST00000479933 ZNF597Q96LX8 424 aa18.88■□□□□ 0.61
TNFRSF8-204ENST00000479933 DOK1Q99704 481 aa18.88■□□□□ 0.61
TNFRSF8-204ENST00000479933 OSBPL11Q9BXB4 747 aa18.88■□□□□ 0.61
TNFRSF8-204ENST00000479933 SLC52A3Q9NQ40 469 aa18.88■□□□□ 0.61
TNFRSF8-204ENST00000479933 SMPD4Q9NXE4 827 aa18.88■□□□□ 0.61
TNFRSF8-204ENST00000479933 DNMT3BQ9UBC3 853 aaKnown RBP18.88■□□□□ 0.61
TNFRSF8-204ENST00000479933 CNOT6Q9ULM6 557 aaKnown RBP18.88■□□□□ 0.61
TNFRSF8-204ENST00000479933 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP18.88■□□□□ 0.61
TNFRSF8-204ENST00000479933 K7EPI3 171 aa18.88■□□□□ 0.61
TNFRSF8-204ENST00000479933 FXYD1O00168 92 aa18.88■□□□□ 0.61
TNFRSF8-204ENST00000479933 PRRG1O14668 218 aa18.88■□□□□ 0.61
TNFRSF8-204ENST00000479933 PQBP1O60828 265 aaKnown RBP18.88■□□□□ 0.61
TNFRSF8-204ENST00000479933 PGLSO95336 258 aa18.88■□□□□ 0.61
TNFRSF8-204ENST00000479933 ZNF7P17097 686 aaPredicted RBP18.88■□□□□ 0.61
TNFRSF8-204ENST00000479933 PTPN2P17706 415 aa18.88■□□□□ 0.61
TNFRSF8-204ENST00000479933 RPS3P23396 243 aaKnown RBP eCLIP18.88■□□□□ 0.61
TNFRSF8-204ENST00000479933 MAPK8P45983 427 aa18.88■□□□□ 0.61
TNFRSF8-204ENST00000479933 HK3P52790 923 aa18.88■□□□□ 0.61
TNFRSF8-204ENST00000479933 CDH18Q13634 790 aa18.88■□□□□ 0.61
TNFRSF8-204ENST00000479933 RAB33AQ14088 237 aa18.88■□□□□ 0.61
TNFRSF8-204ENST00000479933 PCBP2Q15366 365 aaKnown RBP eCLIP18.88■□□□□ 0.61
TNFRSF8-204ENST00000479933 DEFB115Q30KQ5 88 aa18.88■□□□□ 0.61
TNFRSF8-204ENST00000479933 FAM219BQ5XKK7 198 aa18.88■□□□□ 0.61
TNFRSF8-204ENST00000479933 DNAJB7Q7Z6W7 309 aaPredicted RBP18.88■□□□□ 0.61
TNFRSF8-204ENST00000479933 ANKFN1Q8N957 763 aa18.88■□□□□ 0.61
TNFRSF8-204ENST00000479933 HERC2P3Q9BVR0 1158 aa18.88■□□□□ 0.61
TNFRSF8-204ENST00000479933 CCM2LQ9NUG4 571 aaPredicted RBP18.88■□□□□ 0.61
TNFRSF8-204ENST00000479933 ZIM2Q9NZV7 527 aa18.88■□□□□ 0.61
TNFRSF8-204ENST00000479933 ACTR3BQ9P1U1 418 aa18.88■□□□□ 0.61
TNFRSF8-204ENST00000479933 EIF2B4Q9UI10 523 aaKnown RBP18.88■□□□□ 0.61
TNFRSF8-204ENST00000479933 MAFFQ9ULX9 164 aa18.88■□□□□ 0.61
TNFRSF8-204ENST00000479933 FNDC3AQ9Y2H6 1198 aaKnown RBP18.88■□□□□ 0.61
TNFRSF8-204ENST00000479933 A0A1B0GTL3 188 aa18.87■□□□□ 0.61
TNFRSF8-204ENST00000479933 DYTNA2CJ06 578 aa18.87■□□□□ 0.61
TNFRSF8-204ENST00000479933 LSM1O15116 133 aaKnown RBP18.87■□□□□ 0.61
TNFRSF8-204ENST00000479933 NPPAP01160 153 aa18.87■□□□□ 0.61
TNFRSF8-204ENST00000479933 BMP2P12643 396 aa18.87■□□□□ 0.61
TNFRSF8-204ENST00000479933 ESRRGP62508 458 aa18.87■□□□□ 0.61
TNFRSF8-204ENST00000479933 LCN8Q6JVE9 175 aa18.87■□□□□ 0.61
TNFRSF8-204ENST00000479933 ISLR2Q6UXK2 745 aa18.87■□□□□ 0.61
TNFRSF8-204ENST00000479933 FRA10AC1Q70Z53 315 aa18.87■□□□□ 0.61
TNFRSF8-204ENST00000479933 GPR141Q7Z602 305 aa18.87■□□□□ 0.61
TNFRSF8-204ENST00000479933 C2orf49Q9BVC5 232 aaPredicted RBP18.87■□□□□ 0.61
TNFRSF8-204ENST00000479933 PAIP1Q9H074 479 aaKnown RBP18.87■□□□□ 0.61
TNFRSF8-204ENST00000479933 CLPBQ9H078 707 aa18.87■□□□□ 0.61
TNFRSF8-204ENST00000479933 COQ10BQ9H8M1 238 aa18.87■□□□□ 0.61
TNFRSF8-204ENST00000479933 IL1RL2Q9HB29 575 aa18.87■□□□□ 0.61
TNFRSF8-204ENST00000479933 SARS2Q9NP81 518 aaKnown RBP18.87■□□□□ 0.61
TNFRSF8-204ENST00000479933 PTBP2Q9UKA9 531 aaKnown RBP18.87■□□□□ 0.61
TNFRSF8-204ENST00000479933 SLC8A2Q9UPR5 921 aa18.87■□□□□ 0.61
TNFRSF8-204ENST00000479933 GRXCR2A6NFK2 248 aa18.86■□□□□ 0.61
TNFRSF8-204ENST00000479933 GFRA2O00451 464 aa18.86■□□□□ 0.61
TNFRSF8-204ENST00000479933 EEDO75530 441 aaKnown RBP18.86■□□□□ 0.61
TNFRSF8-204ENST00000479933 SLC22A3O75751 556 aa18.86■□□□□ 0.61
TNFRSF8-204ENST00000479933 ZBTB11O95625 1053 aaPredicted RBP18.86■□□□□ 0.61
TNFRSF8-204ENST00000479933 TFPTP0C1Z6 253 aa18.86■□□□□ 0.61
TNFRSF8-204ENST00000479933 SLC6A2P23975 617 aa18.86■□□□□ 0.61
TNFRSF8-204ENST00000479933 GRIA3P42263 894 aa18.86■□□□□ 0.61
TNFRSF8-204ENST00000479933 CSNK1DP48730 415 aa18.86■□□□□ 0.61
TNFRSF8-204ENST00000479933 DIO3P55073 304 aa18.86■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms