RNA–Protein interactions for RNA: ENST00000478573.6

CDC42BPA-212, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5

Gene CDC42BPA, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-212ENST00000478573 TMED6Q8WW62 240 aa4.03□□□□□ -1.76
CDC42BPA-212ENST00000478573 RTP4Q96DX8 246 aa4.03□□□□□ -1.76
CDC42BPA-212ENST00000478573 SRSF8Q9BRL6 282 aaKnown RBP4.03□□□□□ -1.76
CDC42BPA-212ENST00000478573 C1QTNF4Q9BXJ3 329 aa4.03□□□□□ -1.76
CDC42BPA-212ENST00000478573 MAGIXQ9H6Y5 334 aa4.03□□□□□ -1.76
CDC42BPA-212ENST00000478573 SLC28A3Q9HAS3 691 aa4.03□□□□□ -1.76
CDC42BPA-212ENST00000478573 GPR108Q9NPR9 543 aa4.03□□□□□ -1.76
CDC42BPA-212ENST00000478573 OR6C3Q9NZP0 311 aa4.03□□□□□ -1.76
CDC42BPA-212ENST00000478573 NFKBIL1Q9UBC1 381 aaPredicted RBP4.03□□□□□ -1.76
CDC42BPA-212ENST00000478573 CHD4Q14839 1912 aa4.03□□□□□ -1.76
CDC42BPA-212ENST00000478573 WDR81Q562E7 1941 aa4.03□□□□□ -1.76
CDC42BPA-212ENST00000478573 KTN1Q86UP2 1357 aaKnown RBP4.02□□□□□ -1.77
CDC42BPA-212ENST00000478573 COL5A3P25940 1745 aaPredicted RBP4.02□□□□□ -1.77
CDC42BPA-212ENST00000478573 CLEC18AA5D8T8 446 aa4.02□□□□□ -1.77
CDC42BPA-212ENST00000478573 KDM4EB2RXH2 506 aaPredicted RBP4.02□□□□□ -1.77
CDC42BPA-212ENST00000478573 VCYO14598 125 aa4.02□□□□□ -1.77
CDC42BPA-212ENST00000478573 OGG1O15527 345 aa4.02□□□□□ -1.77
CDC42BPA-212ENST00000478573 HIST1H2ABP04908 130 aa4.02□□□□□ -1.77
CDC42BPA-212ENST00000478573 HIST1H2ADP20671 130 aa4.02□□□□□ -1.77
CDC42BPA-212ENST00000478573 UBA1P22314 1058 aaKnown RBP4.02□□□□□ -1.77
CDC42BPA-212ENST00000478573 HNRNPH1P31943 449 aaKnown RBP4.02□□□□□ -1.77
CDC42BPA-212ENST00000478573 PRCPP42785 496 aa4.02□□□□□ -1.77
CDC42BPA-212ENST00000478573 KIF5AQ12840 1032 aa4.02□□□□□ -1.77
CDC42BPA-212ENST00000478573 BAATQ14032 418 aaPredicted RBP4.02□□□□□ -1.77
CDC42BPA-212ENST00000478573 CTTNQ14247 550 aaKnown RBP4.02□□□□□ -1.77
CDC42BPA-212ENST00000478573 SLC39A14Q15043 492 aa4.02□□□□□ -1.77
CDC42BPA-212ENST00000478573 C15orf59Q2T9L4 293 aaPredicted RBP4.02□□□□□ -1.77
CDC42BPA-212ENST00000478573 ZNF718Q3SXZ3 478 aa4.02□□□□□ -1.77
CDC42BPA-212ENST00000478573 TDRD12Q587J7 1177 aaKnown RBP4.02□□□□□ -1.77
CDC42BPA-212ENST00000478573 SIGIRRQ6IA17 410 aa4.02□□□□□ -1.77
CDC42BPA-212ENST00000478573 RPUSD3Q6P087 351 aaKnown RBP4.02□□□□□ -1.77
CDC42BPA-212ENST00000478573 HIST3H2AQ7L7L0 130 aa4.02□□□□□ -1.77
CDC42BPA-212ENST00000478573 SHFQ7M4L6 423 aa4.02□□□□□ -1.77
CDC42BPA-212ENST00000478573 DNAAF5Q86Y56 855 aa4.02□□□□□ -1.77
CDC42BPA-212ENST00000478573 LINC00346Q8IVM7 164 aa4.02□□□□□ -1.77
CDC42BPA-212ENST00000478573 CLEC18CQ8NCF0 446 aa4.02□□□□□ -1.77
CDC42BPA-212ENST00000478573 MOAP1Q96BY2 351 aa4.02□□□□□ -1.77
CDC42BPA-212ENST00000478573 EGLN2Q96KS0 407 aa4.02□□□□□ -1.77
CDC42BPA-212ENST00000478573 PCGF1Q9BSM1 259 aa4.02□□□□□ -1.77
CDC42BPA-212ENST00000478573 HAUS8Q9BT25 410 aa4.02□□□□□ -1.77
CDC42BPA-212ENST00000478573 MMTAG2Q9BU76 263 aaKnown RBP4.02□□□□□ -1.77
CDC42BPA-212ENST00000478573 KCNN2Q9H2S1 579 aa4.02□□□□□ -1.77
CDC42BPA-212ENST00000478573 HRH4Q9H3N8 390 aa4.02□□□□□ -1.77
CDC42BPA-212ENST00000478573 MMP25Q9NPA2 562 aa4.02□□□□□ -1.77
CDC42BPA-212ENST00000478573 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP4.02□□□□□ -1.77
CDC42BPA-212ENST00000478573 MTMR10Q9NXD2 777 aa4.02□□□□□ -1.77
CDC42BPA-212ENST00000478573 COPG2Q9UBF2 871 aa4.02□□□□□ -1.77
CDC42BPA-212ENST00000478573 ACSL5Q9ULC5 683 aa4.02□□□□□ -1.77
CDC42BPA-212ENST00000478573 PADI1Q9ULC6 663 aa4.02□□□□□ -1.77
CDC42BPA-212ENST00000478573 CLIC4Q9Y696 253 aa4.02□□□□□ -1.77
CDC42BPA-212ENST00000478573 OVOS2A0A0G2JMS6 1433 aa4.02□□□□□ -1.77
CDC42BPA-212ENST00000478573 BCL9O00512 1426 aa4.02□□□□□ -1.77
CDC42BPA-212ENST00000478573 SIPA1L3O60292 1781 aaPredicted RBP4.02□□□□□ -1.77
CDC42BPA-212ENST00000478573 KIF24Q5T7B8 1368 aa4.02□□□□□ -1.77
CDC42BPA-212ENST00000478573 PARD3Q8TEW0 1356 aa4.02□□□□□ -1.77
CDC42BPA-212ENST00000478573 CCDC7Q96M83 1385 aa4.02□□□□□ -1.77
CDC42BPA-212ENST00000478573 PLEKHG2Q9H7P9 1386 aa4.02□□□□□ -1.77
CDC42BPA-212ENST00000478573 DLG5Q8TDM6 1919 aa4.01□□□□□ -1.77
CDC42BPA-212ENST00000478573 TTC21BQ7Z4L5 1316 aa4.01□□□□□ -1.77
CDC42BPA-212ENST00000478573 UBR3Q6ZT12 1888 aa4.01□□□□□ -1.77
CDC42BPA-212ENST00000478573 ADAMTS7Q9UKP4 1686 aa4.01□□□□□ -1.77
CDC42BPA-212ENST00000478573 LOC100509620A0A075B734 347 aa4.01□□□□□ -1.77
CDC42BPA-212ENST00000478573 IGHV4-28A0A0C4DH34 117 aa4.01□□□□□ -1.77
CDC42BPA-212ENST00000478573 A0A1B0GVM2 712 aa4.01□□□□□ -1.77
CDC42BPA-212ENST00000478573 C1orf226A1L170 272 aa4.01□□□□□ -1.77
CDC42BPA-212ENST00000478573 SRRM3A6NNA2 597 aaPredicted RBP4.01□□□□□ -1.77
CDC42BPA-212ENST00000478573 TIMM23O14925 209 aa4.01□□□□□ -1.77
CDC42BPA-212ENST00000478573 ATP2A1O14983 1001 aa4.01□□□□□ -1.77
CDC42BPA-212ENST00000478573 HSPA12AO43301 675 aa4.01□□□□□ -1.77
CDC42BPA-212ENST00000478573 ITM2AO43736 263 aa4.01□□□□□ -1.77
CDC42BPA-212ENST00000478573 DKC1O60832 514 aaKnown RBP eCLIP4.01□□□□□ -1.77
CDC42BPA-212ENST00000478573 SOCS5O75159 536 aa4.01□□□□□ -1.77
CDC42BPA-212ENST00000478573 VNN2O95498 520 aa4.01□□□□□ -1.77
CDC42BPA-212ENST00000478573 NAGAP17050 411 aa4.01□□□□□ -1.77
CDC42BPA-212ENST00000478573 ANXA7P20073 488 aaKnown RBP4.01□□□□□ -1.77
CDC42BPA-212ENST00000478573 PIGAP37287 484 aa4.01□□□□□ -1.77
CDC42BPA-212ENST00000478573 GPR143P51810 404 aa4.01□□□□□ -1.77
CDC42BPA-212ENST00000478573 HILS1P60008 231 aa4.01□□□□□ -1.77
CDC42BPA-212ENST00000478573 SEC61A1P61619 476 aaKnown RBP4.01□□□□□ -1.77
CDC42BPA-212ENST00000478573 HNF4GQ14541 408 aa4.01□□□□□ -1.77
CDC42BPA-212ENST00000478573 KRT77Q7Z794 578 aa4.01□□□□□ -1.77
CDC42BPA-212ENST00000478573 KBTBD6Q86V97 674 aa4.01□□□□□ -1.77
CDC42BPA-212ENST00000478573 SYT2Q8N9I0 419 aaPredicted RBP4.01□□□□□ -1.77
CDC42BPA-212ENST00000478573 CCDC191Q8NCU4 936 aa4.01□□□□□ -1.77
CDC42BPA-212ENST00000478573 LRFN5Q96NI6 719 aa4.01□□□□□ -1.77
CDC42BPA-212ENST00000478573 TESK2Q96S53 571 aa4.01□□□□□ -1.77
CDC42BPA-212ENST00000478573 NDST4Q9H3R1 872 aa4.01□□□□□ -1.77
CDC42BPA-212ENST00000478573 OSGEPL1Q9H4B0 414 aa4.01□□□□□ -1.77
CDC42BPA-212ENST00000478573 PPP1R3EQ9H7J1 279 aa4.01□□□□□ -1.77
CDC42BPA-212ENST00000478573 OCIAD1Q9NX40 245 aa4.01□□□□□ -1.77
CDC42BPA-212ENST00000478573 PSD3Q9NYI0 1048 aa4.01□□□□□ -1.77
CDC42BPA-212ENST00000478573 KCNG2Q9UJ96 466 aa4.01□□□□□ -1.77
CDC42BPA-212ENST00000478573 R3HDM2Q9Y2K5 976 aaKnown RBP4.01□□□□□ -1.77
CDC42BPA-212ENST00000478573 PTRH2Q9Y3E5 179 aaKnown RBP4.01□□□□□ -1.77
CDC42BPA-212ENST00000478573 FAM169AQ9Y6X4 670 aa4.01□□□□□ -1.77
CDC42BPA-212ENST00000478573 NCAPD2Q15021 1401 aa4.01□□□□□ -1.77
CDC42BPA-212ENST00000478573 SMG6Q86US8 1419 aaKnown RBP4.01□□□□□ -1.77
CDC42BPA-212ENST00000478573 UBR2Q8IWV8 1755 aa4□□□□□ -1.77
CDC42BPA-212ENST00000478573 KANSL1LA0AUZ9 987 aa4□□□□□ -1.77
CDC42BPA-212ENST00000478573 LRRC72A6NJI9 287 aa4□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms