RNA–Protein interactions for RNA: ENST00000478050.1

SF3B6-202, Transcript of splicing factor 3b subunit 6, humanhuman

TSL 2

Gene SF3B6, Length 720 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B6-202ENST00000478050 TLR8Q9NR97 1041 aaKnown RBP4.91□□□□□ -1.62
SF3B6-202ENST00000478050 MTPAPQ9NVV4 582 aaKnown RBP eCLIP4.91□□□□□ -1.62
SF3B6-202ENST00000478050 NDUFA13Q9P0J0 144 aa4.91□□□□□ -1.62
SF3B6-202ENST00000478050 EPS15L1Q9UBC2 864 aa4.91□□□□□ -1.62
SF3B6-202ENST00000478050 UXTQ9UBK9 157 aaPredicted RBP4.91□□□□□ -1.62
SF3B6-202ENST00000478050 SUCOQ9UBS9 1254 aaKnown RBP4.91□□□□□ -1.62
SF3B6-202ENST00000478050 RIMS3Q9UJD0 308 aa4.91□□□□□ -1.62
SF3B6-202ENST00000478050 NUDT5Q9UKK9 219 aa4.91□□□□□ -1.62
SF3B6-202ENST00000478050 SARDHQ9UL12 918 aa4.91□□□□□ -1.62
SF3B6-202ENST00000478050 OGDHLQ9ULD0 1010 aa4.91□□□□□ -1.62
SF3B6-202ENST00000478050 RAB26Q9ULW5 256 aa4.91□□□□□ -1.62
SF3B6-202ENST00000478050 G3BP2Q9UN86 482 aaKnown RBP4.91□□□□□ -1.62
SF3B6-202ENST00000478050 GABRQQ9UN88 632 aa4.91□□□□□ -1.62
SF3B6-202ENST00000478050 VWA7Q9Y334 891 aa4.91□□□□□ -1.62
SF3B6-202ENST00000478050 TRAF6Q9Y4K3 522 aa4.91□□□□□ -1.62
SF3B6-202ENST00000478050 MAP1BP46821 2468 aaKnown RBP4.91□□□□□ -1.62
SF3B6-202ENST00000478050 CHD6Q8TD26 2715 aa4.91□□□□□ -1.62
SF3B6-202ENST00000478050 SCN8AQ9UQD0 1980 aa4.91□□□□□ -1.62
SF3B6-202ENST00000478050 OBSL1O75147 1896 aa4.9□□□□□ -1.62
SF3B6-202ENST00000478050 DENND4CQ5VZ89 1909 aa4.9□□□□□ -1.62
SF3B6-202ENST00000478050 PRSS51A0A1B0GVH4 220 aa4.9□□□□□ -1.63
SF3B6-202ENST00000478050 SLC12A8A0AV02 714 aa4.9□□□□□ -1.63
SF3B6-202ENST00000478050 CCDC189A1A4V9 331 aa4.9□□□□□ -1.63
SF3B6-202ENST00000478050 NEMP2A6NFY4 417 aa4.9□□□□□ -1.63
SF3B6-202ENST00000478050 TMEM233B4DJY2 109 aa4.9□□□□□ -1.63
SF3B6-202ENST00000478050 F5H5T6 163 aa4.9□□□□□ -1.63
SF3B6-202ENST00000478050 H0YJX3 145 aa4.9□□□□□ -1.63
SF3B6-202ENST00000478050 H7C4K7 107 aa4.9□□□□□ -1.63
SF3B6-202ENST00000478050 PSMD12O00232 456 aaPredicted RBP4.9□□□□□ -1.63
SF3B6-202ENST00000478050 RFXAPO00287 272 aa4.9□□□□□ -1.63
SF3B6-202ENST00000478050 TXNDC9O14530 226 aa4.9□□□□□ -1.63
SF3B6-202ENST00000478050 ACOT8O14734 319 aa4.9□□□□□ -1.63
SF3B6-202ENST00000478050 AURKAO14965 403 aa4.9□□□□□ -1.63
SF3B6-202ENST00000478050 TRIM24O15164 1050 aa4.9□□□□□ -1.63
SF3B6-202ENST00000478050 CD3EAPO15446 510 aaKnown RBP4.9□□□□□ -1.63
SF3B6-202ENST00000478050 DENRO43583 198 aaKnown RBP4.9□□□□□ -1.63
SF3B6-202ENST00000478050 LDB2O43679 373 aa4.9□□□□□ -1.63
SF3B6-202ENST00000478050 AP1G1O43747 822 aa4.9□□□□□ -1.63
SF3B6-202ENST00000478050 PRAMEF11O60813 436 aa4.9□□□□□ -1.63
SF3B6-202ENST00000478050 RNASEH1O60930 286 aaKnown RBP4.9□□□□□ -1.63
SF3B6-202ENST00000478050 CNTN5O94779 1100 aa4.9□□□□□ -1.63
SF3B6-202ENST00000478050 SLITRK5O94991 958 aa4.9□□□□□ -1.63
SF3B6-202ENST00000478050 NDST3O95803 873 aa4.9□□□□□ -1.63
SF3B6-202ENST00000478050 GLP2RO95838 553 aa4.9□□□□□ -1.63
SF3B6-202ENST00000478050 CAPNS1P04632 268 aa4.9□□□□□ -1.63
SF3B6-202ENST00000478050 JUNP05412 331 aaKnown RBP4.9□□□□□ -1.63
SF3B6-202ENST00000478050 C8BP07358 591 aa4.9□□□□□ -1.63
SF3B6-202ENST00000478050 SNRPB2P08579 225 aaKnown RBP4.9□□□□□ -1.63
SF3B6-202ENST00000478050 FGF4P08620 206 aa4.9□□□□□ -1.63
SF3B6-202ENST00000478050 SERPINF2P08697 491 aa4.9□□□□□ -1.63
SF3B6-202ENST00000478050 HAPLN1P10915 354 aaPredicted RBP4.9□□□□□ -1.63
SF3B6-202ENST00000478050 HNRNPLP14866 589 aaKnown RBP eCLIP4.9□□□□□ -1.63
SF3B6-202ENST00000478050 CD1DP15813 335 aa4.9□□□□□ -1.63
SF3B6-202ENST00000478050 VCLP18206 1134 aa4.9□□□□□ -1.63
SF3B6-202ENST00000478050 TACR2P21452 398 aa4.9□□□□□ -1.63
SF3B6-202ENST00000478050 NTF4P34130 210 aa4.9□□□□□ -1.63
SF3B6-202ENST00000478050 PEX19P40855 299 aa4.9□□□□□ -1.63
SF3B6-202ENST00000478050 GPR15P49685 360 aa4.9□□□□□ -1.63
SF3B6-202ENST00000478050 ACADVLP49748 655 aa4.9□□□□□ -1.63
SF3B6-202ENST00000478050 PGFP49763 221 aa4.9□□□□□ -1.63
SF3B6-202ENST00000478050 CCNHP51946 323 aaPredicted RBP4.9□□□□□ -1.63
SF3B6-202ENST00000478050 CHN2P52757 468 aa4.9□□□□□ -1.63
SF3B6-202ENST00000478050 PGGT1BP53609 377 aa4.9□□□□□ -1.63
SF3B6-202ENST00000478050 PKNOX1P55347 436 aa4.9□□□□□ -1.63
SF3B6-202ENST00000478050 MAXP61244 160 aa4.9□□□□□ -1.63
SF3B6-202ENST00000478050 HERVK_113P63132 956 aa4.9□□□□□ -1.63
SF3B6-202ENST00000478050 MRPS22P82650 360 aaKnown RBP4.9□□□□□ -1.63
SF3B6-202ENST00000478050 FOLH1Q04609 750 aa4.9□□□□□ -1.63
SF3B6-202ENST00000478050 CACNB2Q08289 660 aaPredicted RBP4.9□□□□□ -1.63
SF3B6-202ENST00000478050 ELAVL2Q12926 359 aaKnown RBP4.9□□□□□ -1.63
SF3B6-202ENST00000478050 CEACAM7Q14002 265 aa4.9□□□□□ -1.63
SF3B6-202ENST00000478050 PDK3Q15120 406 aa4.9□□□□□ -1.63
SF3B6-202ENST00000478050 LRRC36Q1X8D7 754 aa4.9□□□□□ -1.63
SF3B6-202ENST00000478050 TYSND1Q2T9J0 566 aa4.9□□□□□ -1.63
SF3B6-202ENST00000478050 MMEL1Q495T6 779 aa4.9□□□□□ -1.63
SF3B6-202ENST00000478050 C5orf22Q49AR2 442 aa4.9□□□□□ -1.63
SF3B6-202ENST00000478050 CTXN3Q4LDR2 81 aa4.9□□□□□ -1.63
SF3B6-202ENST00000478050 LIN52Q52LA3 116 aa4.9□□□□□ -1.63
SF3B6-202ENST00000478050 AGKQ53H12 422 aa4.9□□□□□ -1.63
SF3B6-202ENST00000478050 UNC50Q53HI1 259 aa4.9□□□□□ -1.63
SF3B6-202ENST00000478050 ALFQ53S48 1182 aa4.9□□□□□ -1.63
SF3B6-202ENST00000478050 ZNF789Q5FWF6 425 aa4.9□□□□□ -1.63
SF3B6-202ENST00000478050 CLLU1OSQ5K130 101 aa4.9□□□□□ -1.63
SF3B6-202ENST00000478050 WIPI1Q5MNZ9 446 aaPredicted RBP4.9□□□□□ -1.63
SF3B6-202ENST00000478050 SAMD4BQ5PRF9 694 aaKnown RBP4.9□□□□□ -1.63
SF3B6-202ENST00000478050 C10orf120Q5SQS8 335 aa4.9□□□□□ -1.63
SF3B6-202ENST00000478050 ZNF678Q5SXM1 525 aa4.9□□□□□ -1.63
SF3B6-202ENST00000478050 RNF220Q5VTB9 566 aa4.9□□□□□ -1.63
SF3B6-202ENST00000478050 RAP1GAP2Q684P5 730 aa4.9□□□□□ -1.63
SF3B6-202ENST00000478050 REP15Q6BDI9 236 aa4.9□□□□□ -1.63
SF3B6-202ENST00000478050 FBXL22Q6P050 247 aa4.9□□□□□ -1.63
SF3B6-202ENST00000478050 PRMT9Q6P2P2 845 aa4.9□□□□□ -1.63
SF3B6-202ENST00000478050 SLC30A9Q6PML9 568 aa4.9□□□□□ -1.63
SF3B6-202ENST00000478050 UGT2A3Q6UWM9 527 aa4.9□□□□□ -1.63
SF3B6-202ENST00000478050 C22orf34Q6ZV56 151 aa4.9□□□□□ -1.63
SF3B6-202ENST00000478050 EFL1Q7Z2Z2 1120 aaKnown RBP4.9□□□□□ -1.63
SF3B6-202ENST00000478050 KDELC2Q7Z4H8 507 aa4.9□□□□□ -1.63
SF3B6-202ENST00000478050 PTAR1Q7Z6K3 402 aaPredicted RBP4.9□□□□□ -1.63
SF3B6-202ENST00000478050 ZNF605Q86T29 641 aa4.9□□□□□ -1.63
SF3B6-202ENST00000478050 RNF180Q86T96 592 aa4.9□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms