RNA–Protein interactions for RNA: ENST00000477937.2

HDAC7-222, Transcript of histone deacetylase 7, human

TSL 5

Gene HDAC7, Length 410 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HDAC7-222	ENST00000477937	ATP1B2	P14415	290 aa	Predicted RBP	13.52	□□□□□ -0.25
HDAC7-222	ENST00000477937	MC4R	P32245	332 aa		13.52	□□□□□ -0.25
HDAC7-222	ENST00000477937	FDFT1	P37268	417 aa		13.52	□□□□□ -0.25
HDAC7-222	ENST00000477937	LMAN1	P49257	510 aa		13.52	□□□□□ -0.25
HDAC7-222	ENST00000477937	ATP1A2	P50993	1020 aa		13.52	□□□□□ -0.25
HDAC7-222	ENST00000477937	GFER	P55789	205 aa		13.52	□□□□□ -0.25
HDAC7-222	ENST00000477937	RPE65	Q16518	533 aa		13.52	□□□□□ -0.25
HDAC7-222	ENST00000477937	BCL7A	Q4VC05	210 aa		13.52	□□□□□ -0.25
HDAC7-222	ENST00000477937	ZRANB3	Q5FWF4	1079 aa		13.52	□□□□□ -0.25
HDAC7-222	ENST00000477937	ANKS6	Q68DC2	871 aa		13.52	□□□□□ -0.25
HDAC7-222	ENST00000477937	CEACAM20	Q6UY09	585 aa		13.52	□□□□□ -0.25
HDAC7-222	ENST00000477937	DNAAF3	Q8N9W5	541 aa		13.52	□□□□□ -0.25
HDAC7-222	ENST00000477937	ZSCAN1	Q8NBB4	408 aa		13.52	□□□□□ -0.25
HDAC7-222	ENST00000477937	C1orf54	Q8WWF1	131 aa		13.52	□□□□□ -0.25
HDAC7-222	ENST00000477937	PMEPA1	Q969W9	287 aa		13.52	□□□□□ -0.25
HDAC7-222	ENST00000477937	WBP1	Q96G27	269 aa		13.52	□□□□□ -0.25
HDAC7-222	ENST00000477937	ZDHHC12	Q96GR4	267 aa		13.52	□□□□□ -0.25
HDAC7-222	ENST00000477937	LINC00615	Q96LM1	132 aa	Predicted RBP	13.52	□□□□□ -0.25
HDAC7-222	ENST00000477937	C9orf72	Q96LT7	481 aa		13.52	□□□□□ -0.25
HDAC7-222	ENST00000477937	TGM7	Q96PF1	710 aa		13.52	□□□□□ -0.25
HDAC7-222	ENST00000477937	ZPBP	Q9BS86	351 aa		13.52	□□□□□ -0.25
HDAC7-222	ENST00000477937	ETNK1	Q9HBU6	452 aa		13.52	□□□□□ -0.25
HDAC7-222	ENST00000477937	MGA	Q8IWI9	3026 aa		13.51	□□□□□ -0.25
HDAC7-222	ENST00000477937		E7EVH7	732 aa		13.51	□□□□□ -0.25
HDAC7-222	ENST00000477937	POLR1C	O15160	346 aa	Predicted RBP	13.51	□□□□□ -0.25
HDAC7-222	ENST00000477937	SGTA	O43765	313 aa		13.51	□□□□□ -0.25
HDAC7-222	ENST00000477937	RASSF9	O75901	435 aa		13.51	□□□□□ -0.25
HDAC7-222	ENST00000477937	CAPZB	P47756	277 aa		13.51	□□□□□ -0.25
HDAC7-222	ENST00000477937	ARSD	P51689	593 aa		13.51	□□□□□ -0.25
HDAC7-222	ENST00000477937	CDH17	Q12864	832 aa		13.51	□□□□□ -0.25
HDAC7-222	ENST00000477937	SNX1	Q13596	522 aa		13.51	□□□□□ -0.25
HDAC7-222	ENST00000477937	SKIDA1	Q1XH10	827 aa		13.51	□□□□□ -0.25
HDAC7-222	ENST00000477937	KLHL35	Q6PF15	583 aa		13.51	□□□□□ -0.25
HDAC7-222	ENST00000477937	TAS2R42	Q7RTR8	314 aa		13.51	□□□□□ -0.25
HDAC7-222	ENST00000477937	VASH2	Q86V25	355 aa		13.51	□□□□□ -0.25
HDAC7-222	ENST00000477937	CFAP206	Q8IYR0	622 aa		13.51	□□□□□ -0.25
HDAC7-222	ENST00000477937	IL22RA1	Q8N6P7	574 aa		13.51	□□□□□ -0.25
HDAC7-222	ENST00000477937	OR52K1	Q8NGK4	314 aa		13.51	□□□□□ -0.25
HDAC7-222	ENST00000477937	NAT14	Q8WUY8	206 aa		13.51	□□□□□ -0.25
HDAC7-222	ENST00000477937	ZFPM2	Q8WW38	1151 aa		13.51	□□□□□ -0.25
HDAC7-222	ENST00000477937	JPH3	Q8WXH2	748 aa	Predicted RBP	13.51	□□□□□ -0.25
HDAC7-222	ENST00000477937	RSC1A1	Q92681	617 aa		13.51	□□□□□ -0.25
HDAC7-222	ENST00000477937	NKD1	Q969G9	470 aa		13.51	□□□□□ -0.25
HDAC7-222	ENST00000477937	CDKN2AIPNL	Q96HQ2	116 aa		13.51	□□□□□ -0.25
HDAC7-222	ENST00000477937	C12orf66	Q96MD2	445 aa		13.51	□□□□□ -0.25
HDAC7-222	ENST00000477937	CTRC	Q99895	268 aa		13.51	□□□□□ -0.25
HDAC7-222	ENST00000477937	RAB33B	Q9H082	229 aa		13.51	□□□□□ -0.25
HDAC7-222	ENST00000477937	WWP1	Q9H0M0	922 aa		13.51	□□□□□ -0.25
HDAC7-222	ENST00000477937	IMP3	Q9NV31	184 aa	Known RBP	13.51	□□□□□ -0.25
HDAC7-222	ENST00000477937	PIH1D1	Q9NWS0	290 aa	Known RBP	13.51	□□□□□ -0.25
HDAC7-222	ENST00000477937	ZDHHC3	Q9NYG2	299 aa		13.51	□□□□□ -0.25
HDAC7-222	ENST00000477937	FAM8A1	Q9UBU6	413 aa		13.51	□□□□□ -0.25
HDAC7-222	ENST00000477937	EPHA6	Q9UF33	1036 aa		13.51	□□□□□ -0.25
HDAC7-222	ENST00000477937	IGLV3-16	A0A075B6K0	115 aa		13.5	□□□□□ -0.25
HDAC7-222	ENST00000477937	TRBV5-4	A0A0C4DH59	114 aa		13.5	□□□□□ -0.25
HDAC7-222	ENST00000477937	C17orf113	A0A1B0GUU1	675 aa		13.5	□□□□□ -0.25
HDAC7-222	ENST00000477937	MROH6	A6NGR9	719 aa		13.5	□□□□□ -0.25
HDAC7-222	ENST00000477937	POLB	P06746	335 aa		13.5	□□□□□ -0.25
HDAC7-222	ENST00000477937	SLC35G4	P0C7Q5	338 aa		13.5	□□□□□ -0.25
HDAC7-222	ENST00000477937	MTHFD1	P11586	935 aa	Known RBP	13.5	□□□□□ -0.25
HDAC7-222	ENST00000477937	ACRV1	P26436	265 aa		13.5	□□□□□ -0.25
HDAC7-222	ENST00000477937	LEPR	P48357	1165 aa	Known RBP	13.5	□□□□□ -0.25
HDAC7-222	ENST00000477937	PRLHR	P49683	370 aa		13.5	□□□□□ -0.25
HDAC7-222	ENST00000477937	SEPHS1	P49903	392 aa		13.5	□□□□□ -0.25
HDAC7-222	ENST00000477937	CDKN1C	P49918	316 aa	Predicted RBP	13.5	□□□□□ -0.25
HDAC7-222	ENST00000477937	CACNG1	Q06432	222 aa		13.5	□□□□□ -0.25
HDAC7-222	ENST00000477937	SRSF6	Q13247	344 aa	Known RBP	13.5	□□□□□ -0.25
HDAC7-222	ENST00000477937	LAMB3	Q13751	1172 aa		13.5	□□□□□ -0.25
HDAC7-222	ENST00000477937	GSE1	Q14687	1217 aa		13.5	□□□□□ -0.25
HDAC7-222	ENST00000477937	PLCL1	Q15111	1095 aa		13.5	□□□□□ -0.25
HDAC7-222	ENST00000477937	CCNG2	Q16589	344 aa		13.5	□□□□□ -0.25
HDAC7-222	ENST00000477937	CACHD1	Q5VU97	1274 aa		13.5	□□□□□ -0.25
HDAC7-222	ENST00000477937	KIAA1614	Q5VZ46	1190 aa		13.5	□□□□□ -0.25
HDAC7-222	ENST00000477937	IRGC	Q6NXR0	463 aa		13.5	□□□□□ -0.25
HDAC7-222	ENST00000477937	PPP1R21	Q6ZMI0	780 aa		13.5	□□□□□ -0.25
HDAC7-222	ENST00000477937	SERPINA9	Q86WD7	417 aa		13.5	□□□□□ -0.25
HDAC7-222	ENST00000477937	CCDC89	Q8N998	374 aa		13.5	□□□□□ -0.25
HDAC7-222	ENST00000477937	TRIM58	Q8NG06	486 aa		13.5	□□□□□ -0.25
HDAC7-222	ENST00000477937	GPR150	Q8NGU9	434 aa		13.5	□□□□□ -0.25
HDAC7-222	ENST00000477937	MAIP1	Q8WWC4	291 aa		13.5	□□□□□ -0.25
HDAC7-222	ENST00000477937	TTC9	Q92623	222 aa		13.5	□□□□□ -0.25
HDAC7-222	ENST00000477937	INSM2	Q96T92	566 aa	Predicted RBP	13.5	□□□□□ -0.25
HDAC7-222	ENST00000477937	CCM2	Q9BSQ5	444 aa		13.5	□□□□□ -0.25
HDAC7-222	ENST00000477937	ZNF768	Q9H5H4	540 aa	Known RBP	13.5	□□□□□ -0.25
HDAC7-222	ENST00000477937	VPS37B	Q9H9H4	285 aa		13.5	□□□□□ -0.25
HDAC7-222	ENST00000477937	RAB6B	Q9NRW1	208 aa		13.5	□□□□□ -0.25
HDAC7-222	ENST00000477937	PAK5	Q9P286	719 aa		13.5	□□□□□ -0.25
HDAC7-222	ENST00000477937	CFAP20	Q9Y6A4	193 aa	Known RBP	13.5	□□□□□ -0.25
HDAC7-222	ENST00000477937	COLEC10	Q9Y6Z7	277 aa		13.5	□□□□□ -0.25
HDAC7-222	ENST00000477937	SUN1	O94901	812 aa		13.49	□□□□□ -0.25
HDAC7-222	ENST00000477937	PRB1	P04280	392 aa		13.49	□□□□□ -0.25
HDAC7-222	ENST00000477937	FOXM1	Q08050	763 aa		13.49	□□□□□ -0.25
HDAC7-222	ENST00000477937	C19orf57	Q0VDD7	668 aa		13.49	□□□□□ -0.25
HDAC7-222	ENST00000477937	COL9A2	Q14055	689 aa	Predicted RBP	13.49	□□□□□ -0.25
HDAC7-222	ENST00000477937	KRT33B	Q14525	404 aa		13.49	□□□□□ -0.25
HDAC7-222	ENST00000477937	CCDC38	Q502W7	563 aa		13.49	□□□□□ -0.25
HDAC7-222	ENST00000477937	ZNF449	Q6P9G9	518 aa		13.49	□□□□□ -0.25
HDAC7-222	ENST00000477937	PCSK4	Q6UW60	755 aa		13.49	□□□□□ -0.25
HDAC7-222	ENST00000477937	FAM92B	Q6ZTR7	304 aa		13.49	□□□□□ -0.25
HDAC7-222	ENST00000477937	PRSS42	Q7Z5A4	293 aa		13.49	□□□□□ -0.25

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