RNA–Protein interactions for RNA: ENST00000477890.6

CPSF7-211, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 5

Gene CPSF7, Length 1,234 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-211ENST00000477890 SPTLC3Q9NUV7 552 aa11.49□□□□□ -0.57
CPSF7-211ENST00000477890 IMP3Q9NV31 184 aaKnown RBP11.49□□□□□ -0.57
CPSF7-211ENST00000477890 ZNHIT6Q9NWK9 470 aaKnown RBP11.49□□□□□ -0.57
CPSF7-211ENST00000477890 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP11.49□□□□□ -0.57
CPSF7-211ENST00000477890 HACD3Q9P035 362 aa11.49□□□□□ -0.57
CPSF7-211ENST00000477890 KLHL8Q9P2G9 620 aaPredicted RBP11.49□□□□□ -0.57
CPSF7-211ENST00000477890 HYOU1Q9Y4L1 999 aa11.49□□□□□ -0.57
CPSF7-211ENST00000477890 CFAP20Q9Y6A4 193 aaKnown RBP11.49□□□□□ -0.57
CPSF7-211ENST00000477890 DNMT3AQ9Y6K1 912 aaPredicted RBP11.49□□□□□ -0.57
CPSF7-211ENST00000477890 OR5K3A6NET4 321 aa11.48□□□□□ -0.57
CPSF7-211ENST00000477890 TLCD2A6NGC4 264 aa11.48□□□□□ -0.57
CPSF7-211ENST00000477890 TTLL8A6PVC2 850 aa11.48□□□□□ -0.57
CPSF7-211ENST00000477890 SPOPO43791 374 aa11.48□□□□□ -0.57
CPSF7-211ENST00000477890 CST8O60676 142 aa11.48□□□□□ -0.57
CPSF7-211ENST00000477890 CPNE3O75131 537 aaKnown RBP11.48□□□□□ -0.57
CPSF7-211ENST00000477890 EPOP01588 193 aa11.48□□□□□ -0.57
CPSF7-211ENST00000477890 MTHFD1P11586 935 aaKnown RBP11.48□□□□□ -0.57
CPSF7-211ENST00000477890 MSH3P20585 1137 aa11.48□□□□□ -0.57
CPSF7-211ENST00000477890 PTPN4P29074 926 aa11.48□□□□□ -0.57
CPSF7-211ENST00000477890 AKT1P31749 480 aa11.48□□□□□ -0.57
CPSF7-211ENST00000477890 CDKN2BP42772 138 aa11.48□□□□□ -0.57
CPSF7-211ENST00000477890 SLC1A1P43005 524 aa11.48□□□□□ -0.57
CPSF7-211ENST00000477890 RPS15P62841 145 aaKnown RBP11.48□□□□□ -0.57
CPSF7-211ENST00000477890 HSD11B2P80365 405 aa11.48□□□□□ -0.57
CPSF7-211ENST00000477890 PDE1BQ01064 536 aa11.48□□□□□ -0.57
CPSF7-211ENST00000477890 ITGA9Q13797 1035 aa11.48□□□□□ -0.57
CPSF7-211ENST00000477890 TFDP2Q14188 446 aa11.48□□□□□ -0.57
CPSF7-211ENST00000477890 SLC1A5Q15758 541 aa11.48□□□□□ -0.57
CPSF7-211ENST00000477890 UGT8Q16880 541 aa11.48□□□□□ -0.57
CPSF7-211ENST00000477890 FNBP1LQ5T0N5 605 aa11.48□□□□□ -0.57
CPSF7-211ENST00000477890 CPZQ66K79 652 aa11.48□□□□□ -0.57
CPSF7-211ENST00000477890 DUS1LQ6P1R4 473 aaKnown RBP11.48□□□□□ -0.57
CPSF7-211ENST00000477890 DET1Q7L5Y6 550 aa11.48□□□□□ -0.57
CPSF7-211ENST00000477890 PID1Q7Z2X4 250 aa11.48□□□□□ -0.57
CPSF7-211ENST00000477890 SYVN1Q86TM6 617 aa11.48□□□□□ -0.57
CPSF7-211ENST00000477890 ZC3H18Q86VM9 953 aaKnown RBP11.48□□□□□ -0.57
CPSF7-211ENST00000477890 OOSP2Q86WS3 158 aa11.48□□□□□ -0.57
CPSF7-211ENST00000477890 KMT5CQ86Y97 462 aa11.48□□□□□ -0.57
CPSF7-211ENST00000477890 TMEM126BQ8IUX1 230 aa11.48□□□□□ -0.57
CPSF7-211ENST00000477890 D2HGDHQ8N465 521 aa11.48□□□□□ -0.57
CPSF7-211ENST00000477890 BEND7Q8N7W2 519 aaPredicted RBP11.48□□□□□ -0.57
CPSF7-211ENST00000477890 IPMKQ8NFU5 416 aa11.48□□□□□ -0.57
CPSF7-211ENST00000477890 THAP4Q8WY91 577 aa11.48□□□□□ -0.57
CPSF7-211ENST00000477890 OXNAD1Q96HP4 312 aaPredicted RBP11.48□□□□□ -0.57
CPSF7-211ENST00000477890 MRGPRX2Q96LB1 330 aa11.48□□□□□ -0.57
CPSF7-211ENST00000477890 C12orf66Q96MD2 445 aa11.48□□□□□ -0.57
CPSF7-211ENST00000477890 FCRL5Q96RD9 977 aa11.48□□□□□ -0.57
CPSF7-211ENST00000477890 CD180Q99467 661 aa11.48□□□□□ -0.57
CPSF7-211ENST00000477890 CHP1Q99653 195 aa11.48□□□□□ -0.57
CPSF7-211ENST00000477890 WWP1Q9H0M0 922 aa11.48□□□□□ -0.57
CPSF7-211ENST00000477890 HRASLS2Q9NWW9 162 aa11.48□□□□□ -0.57
CPSF7-211ENST00000477890 FAM8A1Q9UBU6 413 aa11.48□□□□□ -0.57
CPSF7-211ENST00000477890 PKP3Q9Y446 797 aa11.48□□□□□ -0.57
CPSF7-211ENST00000477890 MED13Q9UHV7 2174 aa11.47□□□□□ -0.57
CPSF7-211ENST00000477890 GAPDHSO14556 408 aaPredicted RBP11.47□□□□□ -0.57
CPSF7-211ENST00000477890 STX7O15400 261 aaKnown RBP11.47□□□□□ -0.57
CPSF7-211ENST00000477890 VPS4BO75351 444 aa11.47□□□□□ -0.57
CPSF7-211ENST00000477890 SCRG1O75711 98 aa11.47□□□□□ -0.57
CPSF7-211ENST00000477890 HLA-DPA1P20036 260 aa11.47□□□□□ -0.57
CPSF7-211ENST00000477890 COMTP21964 271 aa11.47□□□□□ -0.57
CPSF7-211ENST00000477890 UQCRFS1P47985 274 aa11.47□□□□□ -0.57
CPSF7-211ENST00000477890 TUBB4BP68371 445 aa11.47□□□□□ -0.57
CPSF7-211ENST00000477890 CHAF1BQ13112 559 aa11.47□□□□□ -0.57
CPSF7-211ENST00000477890 IL10RAQ13651 578 aa11.47□□□□□ -0.57
CPSF7-211ENST00000477890 TUBB2AQ13885 445 aa11.47□□□□□ -0.57
CPSF7-211ENST00000477890 TRIM14Q14142 442 aa11.47□□□□□ -0.57
CPSF7-211ENST00000477890 PTPRCAPQ14761 206 aa11.47□□□□□ -0.57
CPSF7-211ENST00000477890 GPR19Q15760 415 aa11.47□□□□□ -0.57
CPSF7-211ENST00000477890 LONRF2Q1L5Z9 754 aa11.47□□□□□ -0.57
CPSF7-211ENST00000477890 METRNLQ641Q3 311 aa11.47□□□□□ -0.57
CPSF7-211ENST00000477890 ARMC6Q6NXE6 501 aa11.47□□□□□ -0.57
CPSF7-211ENST00000477890 ZNF567Q8N184 647 aa11.47□□□□□ -0.57
CPSF7-211ENST00000477890 EFCAB3Q8N7B9 438 aa11.47□□□□□ -0.57
CPSF7-211ENST00000477890 NAT14Q8WUY8 206 aa11.47□□□□□ -0.57
CPSF7-211ENST00000477890 P3H4Q92791 437 aa11.47□□□□□ -0.57
CPSF7-211ENST00000477890 MR1Q95460 341 aa11.47□□□□□ -0.57
CPSF7-211ENST00000477890 HAUS1Q96CS2 278 aa11.47□□□□□ -0.57
CPSF7-211ENST00000477890 CCDC42Q96M95 316 aa11.47□□□□□ -0.57
CPSF7-211ENST00000477890 PSMG3-AS1Q96PY0 264 aa11.47□□□□□ -0.57
CPSF7-211ENST00000477890 INSM2Q96T92 566 aaPredicted RBP11.47□□□□□ -0.57
CPSF7-211ENST00000477890 SLC25A23Q9BV35 468 aa11.47□□□□□ -0.57
CPSF7-211ENST00000477890 TUBB2BQ9BVA1 445 aa11.47□□□□□ -0.57
CPSF7-211ENST00000477890 FSD1LQ9BXM9 530 aa11.47□□□□□ -0.57
CPSF7-211ENST00000477890 NHEJ1Q9H9Q4 299 aaPredicted RBP11.47□□□□□ -0.57
CPSF7-211ENST00000477890 LRRC4CQ9HCJ2 640 aa11.47□□□□□ -0.57
CPSF7-211ENST00000477890 ACSS2Q9NR19 701 aa11.47□□□□□ -0.57
CPSF7-211ENST00000477890 KCND1Q9NSA2 647 aa11.47□□□□□ -0.57
CPSF7-211ENST00000477890 SMOXQ9NWM0 555 aa11.47□□□□□ -0.57
CPSF7-211ENST00000477890 SOHLH2Q9NX45 425 aa11.47□□□□□ -0.57
CPSF7-211ENST00000477890 VPS4AQ9UN37 437 aa11.47□□□□□ -0.57
CPSF7-211ENST00000477890 FARSAQ9Y285 508 aaKnown RBP11.47□□□□□ -0.57
CPSF7-211ENST00000477890 OR6C74A6NCV1 312 aa11.46□□□□□ -0.57
CPSF7-211ENST00000477890 MGAT4DA6NG13 374 aa11.46□□□□□ -0.57
CPSF7-211ENST00000477890 ARGFXA6NJG6 315 aa11.46□□□□□ -0.57
CPSF7-211ENST00000477890 PRAMEF1O95521 474 aa11.46□□□□□ -0.57
CPSF7-211ENST00000477890 ZBTB11O95625 1053 aaPredicted RBP11.46□□□□□ -0.57
CPSF7-211ENST00000477890 TPM1P09493 284 aa11.46□□□□□ -0.57
CPSF7-211ENST00000477890 SPTBP11277 2137 aa11.46□□□□□ -0.57
CPSF7-211ENST00000477890 ARCN1P48444 511 aaKnown RBP11.46□□□□□ -0.57
CPSF7-211ENST00000477890 CCL11P51671 97 aa11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms