RNA–Protein interactions for RNA: ENST00000477739.1

CMC1-209, Transcript of C-X9-C motif containing 1, humanhuman

TSL 1 (best)

Gene CMC1, Length 3,749 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMC1-209ENST00000477739 TPK1Q9H3S4 243 aa9.64□□□□□ -0.87
CMC1-209ENST00000477739 TOR3AQ9H497 397 aa9.64□□□□□ -0.87
CMC1-209ENST00000477739 ZDHHC7Q9NXF8 308 aa9.64□□□□□ -0.87
CMC1-209ENST00000477739 PCDHB5Q9Y5E4 795 aa9.64□□□□□ -0.87
CMC1-209ENST00000477739 DNMT3AQ9Y6K1 912 aaPredicted RBP9.64□□□□□ -0.87
CMC1-209ENST00000477739 RANBP2P49792 3224 aaKnown RBP9.64□□□□□ -0.87
CMC1-209ENST00000477739 C2orf81A6NN90 581 aa9.64□□□□□ -0.87
CMC1-209ENST00000477739 INMTO95050 263 aa9.64□□□□□ -0.87
CMC1-209ENST00000477739 PRKAR2AP13861 404 aaKnown RBP9.64□□□□□ -0.87
CMC1-209ENST00000477739 TNFRSF1BP20333 461 aa9.64□□□□□ -0.87
CMC1-209ENST00000477739 PRDX6P30041 224 aa9.64□□□□□ -0.87
CMC1-209ENST00000477739 SHMT2P34897 504 aa9.64□□□□□ -0.87
CMC1-209ENST00000477739 IL2P60568 153 aa9.64□□□□□ -0.87
CMC1-209ENST00000477739 XIAPP98170 497 aa9.64□□□□□ -0.87
CMC1-209ENST00000477739 DMPKQ09013 629 aa9.64□□□□□ -0.87
CMC1-209ENST00000477739 EPS8Q12929 822 aa9.64□□□□□ -0.87
CMC1-209ENST00000477739 SLC13A2Q13183 592 aa9.64□□□□□ -0.87
CMC1-209ENST00000477739 PRKG2Q13237 762 aa9.64□□□□□ -0.87
CMC1-209ENST00000477739 TRIP4Q15650 581 aaPredicted RBP9.64□□□□□ -0.87
CMC1-209ENST00000477739 CMPK2Q5EBM0 449 aa9.64□□□□□ -0.87
CMC1-209ENST00000477739 FAM171BQ6P995 826 aa9.64□□□□□ -0.87
CMC1-209ENST00000477739 ZNF549Q6P9A3 640 aa9.64□□□□□ -0.87
CMC1-209ENST00000477739 C17orf99Q6UX52 265 aa9.64□□□□□ -0.87
CMC1-209ENST00000477739 AHSA2Q719I0 299 aa9.64□□□□□ -0.87
CMC1-209ENST00000477739 SCD5Q86SK9 330 aa9.64□□□□□ -0.87
CMC1-209ENST00000477739 CACTIN-AS1Q8N1I8 211 aa9.64□□□□□ -0.87
CMC1-209ENST00000477739 ZCCHC7Q8N3Z6 543 aaKnown RBP9.64□□□□□ -0.87
CMC1-209ENST00000477739 OR2T12Q8NG77 320 aa9.64□□□□□ -0.87
CMC1-209ENST00000477739 CENPNQ96H22 339 aaPredicted RBP9.64□□□□□ -0.87
CMC1-209ENST00000477739 CDKN2AIPNLQ96HQ2 116 aa9.64□□□□□ -0.87
CMC1-209ENST00000477739 DACH2Q96NX9 599 aa9.64□□□□□ -0.87
CMC1-209ENST00000477739 GPATCH1Q9BRR8 931 aaKnown RBP9.64□□□□□ -0.87
CMC1-209ENST00000477739 BOCQ9BWV1 1114 aa9.64□□□□□ -0.87
CMC1-209ENST00000477739 FBXO44Q9H4M3 255 aa9.64□□□□□ -0.87
CMC1-209ENST00000477739 IPPKQ9H8X2 491 aa9.64□□□□□ -0.87
CMC1-209ENST00000477739 PARVBQ9HBI1 364 aa9.64□□□□□ -0.87
CMC1-209ENST00000477739 CSNK1G1Q9HCP0 422 aa9.64□□□□□ -0.87
CMC1-209ENST00000477739 POLR3BQ9NW08 1133 aaPredicted RBP9.64□□□□□ -0.87
CMC1-209ENST00000477739 LRFN2Q9ULH4 789 aa9.64□□□□□ -0.87
CMC1-209ENST00000477739 CORINQ9Y5Q5 1042 aa9.64□□□□□ -0.87
CMC1-209ENST00000477739 LOC285556D6RIA3 1793 aa9.64□□□□□ -0.87
CMC1-209ENST00000477739 G3V2T6 193 aa9.64□□□□□ -0.87
CMC1-209ENST00000477739 H3BMQ9 156 aa9.64□□□□□ -0.87
CMC1-209ENST00000477739 RHOCP08134 193 aa9.64□□□□□ -0.87
CMC1-209ENST00000477739 TCF3P15923 654 aa9.64□□□□□ -0.87
CMC1-209ENST00000477739 AZGP1P25311 298 aaKnown RBP9.64□□□□□ -0.87
CMC1-209ENST00000477739 VARSP26640 1264 aaKnown RBP9.64□□□□□ -0.87
CMC1-209ENST00000477739 PPP3CCP48454 512 aa9.64□□□□□ -0.87
CMC1-209ENST00000477739 CCT8P50990 548 aa9.64□□□□□ -0.87
CMC1-209ENST00000477739 MLLT6P55198 1093 aaPredicted RBP9.64□□□□□ -0.87
CMC1-209ENST00000477739 SH3BGRP55822 239 aaPredicted RBP9.64□□□□□ -0.87
CMC1-209ENST00000477739 PRKCZQ05513 592 aa9.64□□□□□ -0.87
CMC1-209ENST00000477739 FAM98BQ52LJ0 330 aaKnown RBP9.64□□□□□ -0.87
CMC1-209ENST00000477739 MS4A13Q5J8X5 152 aa9.64□□□□□ -0.87
CMC1-209ENST00000477739 Q6ZPB1 254 aaPredicted RBP9.64□□□□□ -0.87
CMC1-209ENST00000477739 DEFB128Q7Z7B8 93 aa9.64□□□□□ -0.87
CMC1-209ENST00000477739 FAR2Q96K12 515 aa9.64□□□□□ -0.87
CMC1-209ENST00000477739 COG8Q96MW5 612 aa9.64□□□□□ -0.87
CMC1-209ENST00000477739 PPP1R2P1Q96PQ5 205 aa9.64□□□□□ -0.87
CMC1-209ENST00000477739 OR52E6Q96RD3 313 aa9.64□□□□□ -0.87
CMC1-209ENST00000477739 SMOC2Q9H3U7 446 aa9.64□□□□□ -0.87
CMC1-209ENST00000477739 PLGRKTQ9HBL7 147 aa9.64□□□□□ -0.87
CMC1-209ENST00000477739 SUCOQ9UBS9 1254 aaKnown RBP9.64□□□□□ -0.87
CMC1-209ENST00000477739 PRKAB1Q9Y478 270 aa9.64□□□□□ -0.87
CMC1-209ENST00000477739 TRIM17Q9Y577 477 aa9.64□□□□□ -0.87
CMC1-209ENST00000477739 ZFP37Q9Y6Q3 630 aaPredicted RBP9.64□□□□□ -0.87
CMC1-209ENST00000477739 HTTP42858 3142 aa9.63□□□□□ -0.87
CMC1-209ENST00000477739 BPTFQ12830 3046 aa9.63□□□□□ -0.87
CMC1-209ENST00000477739 ZNF638Q14966 1978 aaKnown RBP9.63□□□□□ -0.87
CMC1-209ENST00000477739 TRIM43BA6NCK2 446 aa9.63□□□□□ -0.87
CMC1-209ENST00000477739 IQCJ-SCHIP1C9J366 451 aaPredicted RBP9.63□□□□□ -0.87
CMC1-209ENST00000477739 NPHS1O60500 1241 aa9.63□□□□□ -0.87
CMC1-209ENST00000477739 DEAF1O75398 565 aaPredicted RBP9.63□□□□□ -0.87
CMC1-209ENST00000477739 GJA1P17302 382 aa9.63□□□□□ -0.87
CMC1-209ENST00000477739 HALP42357 657 aa9.63□□□□□ -0.87
CMC1-209ENST00000477739 BMXP51813 675 aa9.63□□□□□ -0.87
CMC1-209ENST00000477739 HK2P52789 917 aa9.63□□□□□ -0.87
CMC1-209ENST00000477739 CTBSQ01459 385 aa9.63□□□□□ -0.87
CMC1-209ENST00000477739 IHHQ14623 411 aa9.63□□□□□ -0.87
CMC1-209ENST00000477739 RFTN2Q52LD8 501 aaPredicted RBP9.63□□□□□ -0.87
CMC1-209ENST00000477739 KIAA0930Q6ICG6 404 aaPredicted RBP9.63□□□□□ -0.87
CMC1-209ENST00000477739 RANBP10Q6VN20 620 aa9.63□□□□□ -0.87
CMC1-209ENST00000477739 LRRC8DQ7L1W4 858 aa9.63□□□□□ -0.87
CMC1-209ENST00000477739 PAGE2Q7Z2X7 111 aa9.63□□□□□ -0.87
CMC1-209ENST00000477739 C8orf59Q8N0T1 100 aaPredicted RBP9.63□□□□□ -0.87
CMC1-209ENST00000477739 CENPSQ8N2Z9 138 aa9.63□□□□□ -0.87
CMC1-209ENST00000477739 ZNF513Q8N8E2 541 aaPredicted RBP9.63□□□□□ -0.87
CMC1-209ENST00000477739 Q8N9G6 341 aaPredicted RBP9.63□□□□□ -0.87
CMC1-209ENST00000477739 MED8Q96G25 268 aa9.63□□□□□ -0.87
CMC1-209ENST00000477739 PLEKHA8Q96JA3 519 aa9.63□□□□□ -0.87
CMC1-209ENST00000477739 SUSD3Q96L08 255 aa9.63□□□□□ -0.87
CMC1-209ENST00000477739 APOLD1Q96LR9 279 aa9.63□□□□□ -0.87
CMC1-209ENST00000477739 DPH2Q9BQC3 489 aaPredicted RBP9.63□□□□□ -0.87
CMC1-209ENST00000477739 CIPCQ9C0C6 399 aa9.63□□□□□ -0.87
CMC1-209ENST00000477739 SLC25A51Q9H1U9 297 aa9.63□□□□□ -0.87
CMC1-209ENST00000477739 ASB8Q9H765 288 aa9.63□□□□□ -0.87
CMC1-209ENST00000477739 SAP18O00422 153 aaKnown RBP9.63□□□□□ -0.87
CMC1-209ENST00000477739 SEPT4O43236 478 aa9.63□□□□□ -0.87
CMC1-209ENST00000477739 CDK9P50750 372 aaKnown RBP9.63□□□□□ -0.87
CMC1-209ENST00000477739 RHOAP61586 193 aa9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms