RNA–Protein interactions for RNA: ENST00000477554.5

PTPN7-209, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

APPRIS ALT2 TSL 2

Gene PTPN7, Length 1,432 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-209ENST00000477554 TYRP1P17643 537 aa17.31■□□□□ 0.36
PTPN7-209ENST00000477554 MSH3P20585 1137 aa17.31■□□□□ 0.36
PTPN7-209ENST00000477554 GPR3P46089 330 aa17.31■□□□□ 0.36
PTPN7-209ENST00000477554 VPS41P49754 854 aa17.31■□□□□ 0.36
PTPN7-209ENST00000477554 GFERP55789 205 aa17.31■□□□□ 0.36
PTPN7-209ENST00000477554 PPP1CAP62136 330 aa17.31■□□□□ 0.36
PTPN7-209ENST00000477554 GUCY2DQ02846 1103 aa17.31■□□□□ 0.36
PTPN7-209ENST00000477554 GTF2H3Q13889 308 aa17.31■□□□□ 0.36
PTPN7-209ENST00000477554 ZRANB3Q5FWF4 1079 aa17.31■□□□□ 0.36
PTPN7-209ENST00000477554 SNAP47Q5SQN1 464 aa17.31■□□□□ 0.36
PTPN7-209ENST00000477554 CLDN19Q8N6F1 224 aa17.31■□□□□ 0.36
PTPN7-209ENST00000477554 SEC14L1Q92503 715 aa17.31■□□□□ 0.36
PTPN7-209ENST00000477554 SNF8Q96H20 258 aa17.31■□□□□ 0.36
PTPN7-209ENST00000477554 TTC25Q96NG3 672 aa17.31■□□□□ 0.36
PTPN7-209ENST00000477554 FOXJ2Q9P0K8 574 aa17.31■□□□□ 0.36
PTPN7-209ENST00000477554 DMGDHQ9UI17 866 aaKnown RBP17.31■□□□□ 0.36
PTPN7-209ENST00000477554 PCDHGA8Q9Y5G5 932 aa17.31■□□□□ 0.36
PTPN7-209ENST00000477554 TRBV5-4A0A0C4DH59 114 aa17.3■□□□□ 0.36
PTPN7-209ENST00000477554 A8MU76 341 aa17.3■□□□□ 0.36
PTPN7-209ENST00000477554 LIMK2P53671 638 aa17.3■□□□□ 0.36
PTPN7-209ENST00000477554 SEMA3AQ14563 771 aa17.3■□□□□ 0.36
PTPN7-209ENST00000477554 DBN1Q16643 649 aa17.3■□□□□ 0.36
PTPN7-209ENST00000477554 ERCC6LQ2NKX8 1250 aa17.3■□□□□ 0.36
PTPN7-209ENST00000477554 ZNF658BQ4V348 819 aaPredicted RBP17.3■□□□□ 0.36
PTPN7-209ENST00000477554 ANKRD22Q5VYY1 191 aa17.3■□□□□ 0.36
PTPN7-209ENST00000477554 ABRAXAS1Q6UWZ7 409 aa17.3■□□□□ 0.36
PTPN7-209ENST00000477554 NAPRTQ6XQN6 538 aa17.3■□□□□ 0.36
PTPN7-209ENST00000477554 SNX20Q7Z614 316 aa17.3■□□□□ 0.36
PTPN7-209ENST00000477554 SLC9B2Q86UD5 537 aa17.3■□□□□ 0.36
PTPN7-209ENST00000477554 AMZ2Q86W34 360 aa17.3■□□□□ 0.36
PTPN7-209ENST00000477554 SERPINA9Q86WD7 417 aa17.3■□□□□ 0.36
PTPN7-209ENST00000477554 SPACA3Q8IXA5 215 aa17.3■□□□□ 0.36
PTPN7-209ENST00000477554 IFT20Q8IY31 132 aa17.3■□□□□ 0.36
PTPN7-209ENST00000477554 DNAAF3Q8N9W5 541 aa17.3■□□□□ 0.36
PTPN7-209ENST00000477554 MYRIPQ8NFW9 859 aa17.3■□□□□ 0.36
PTPN7-209ENST00000477554 NCSTNQ92542 709 aa17.3■□□□□ 0.36
PTPN7-209ENST00000477554 TRIM56Q9BRZ2 755 aaKnown RBP17.3■□□□□ 0.36
PTPN7-209ENST00000477554 TRIM31Q9BZY9 425 aa17.3■□□□□ 0.36
PTPN7-209ENST00000477554 FAM114A2Q9NRY5 505 aa17.3■□□□□ 0.36
PTPN7-209ENST00000477554 WHRNQ9P202 907 aa17.3■□□□□ 0.36
PTPN7-209ENST00000477554 KLHL3Q9UH77 587 aa17.3■□□□□ 0.36
PTPN7-209ENST00000477554 PIKFYVEQ9Y2I7 2098 aa17.3■□□□□ 0.36
PTPN7-209ENST00000477554 KIR2DS5A0A0G2JLQ3 304 aa17.3■□□□□ 0.36
PTPN7-209ENST00000477554 A0A0G2JNG1 304 aa17.3■□□□□ 0.36
PTPN7-209ENST00000477554 C9orf172C9J069 976 aa17.3■□□□□ 0.36
PTPN7-209ENST00000477554 KIR2DS3K7RE56 304 aa17.3■□□□□ 0.36
PTPN7-209ENST00000477554 SMAPO00193 183 aa17.3■□□□□ 0.36
PTPN7-209ENST00000477554 DNALI1O14645 258 aaPredicted RBP17.3■□□□□ 0.36
PTPN7-209ENST00000477554 TUBBP07437 444 aa17.3■□□□□ 0.36
PTPN7-209ENST00000477554 THRAP10827 490 aa17.3■□□□□ 0.36
PTPN7-209ENST00000477554 XRCC1P18887 633 aaPredicted RBP17.3■□□□□ 0.36
PTPN7-209ENST00000477554 PSMA3P25788 255 aa17.3■□□□□ 0.36
PTPN7-209ENST00000477554 ACRV1P26436 265 aa17.3■□□□□ 0.36
PTPN7-209ENST00000477554 IVDP26440 423 aa17.3■□□□□ 0.36
PTPN7-209ENST00000477554 SLC5A2P31639 672 aa17.3■□□□□ 0.36
PTPN7-209ENST00000477554 FOXN2P32314 431 aa17.3■□□□□ 0.36
PTPN7-209ENST00000477554 LMAN1P49257 510 aa17.3■□□□□ 0.36
PTPN7-209ENST00000477554 BASP1P80723 227 aaKnown RBP17.3■□□□□ 0.36
PTPN7-209ENST00000477554 CDH17Q12864 832 aa17.3■□□□□ 0.36
PTPN7-209ENST00000477554 CALCOCO2Q13137 446 aa17.3■□□□□ 0.36
PTPN7-209ENST00000477554 GPR18Q14330 331 aa17.3■□□□□ 0.36
PTPN7-209ENST00000477554 KIR2DS5Q14953 304 aa17.3■□□□□ 0.36
PTPN7-209ENST00000477554 TGIF1Q15583 401 aa17.3■□□□□ 0.36
PTPN7-209ENST00000477554 PPP1R21Q6ZMI0 780 aa17.3■□□□□ 0.36
PTPN7-209ENST00000477554 TAS2R42Q7RTR8 314 aa17.3■□□□□ 0.36
PTPN7-209ENST00000477554 RSC1A1Q92681 617 aa17.3■□□□□ 0.36
PTPN7-209ENST00000477554 ZNF578Q96N58 590 aaPredicted RBP17.3■□□□□ 0.36
PTPN7-209ENST00000477554 TMEM74Q96NL1 305 aa17.3■□□□□ 0.36
PTPN7-209ENST00000477554 WWP1Q9H0M0 922 aa17.3■□□□□ 0.36
PTPN7-209ENST00000477554 OCIAD1Q9NX40 245 aa17.3■□□□□ 0.36
PTPN7-209ENST00000477554 NOL12Q9UGY1 213 aaKnown RBP eCLIP17.3■□□□□ 0.36
PTPN7-209ENST00000477554 SNX24Q9Y343 169 aa17.3■□□□□ 0.36
PTPN7-209ENST00000477554 V9GYY5 206 aaPredicted RBP17.3■□□□□ 0.36
PTPN7-209ENST00000477554 IGLV3-16A0A075B6K0 115 aa17.29■□□□□ 0.36
PTPN7-209ENST00000477554 BHMG1C9JSJ3 638 aaPredicted RBP17.29■□□□□ 0.36
PTPN7-209ENST00000477554 E7EVH7 732 aa17.29■□□□□ 0.36
PTPN7-209ENST00000477554 H7C0S8 307 aa17.29■□□□□ 0.36
PTPN7-209ENST00000477554 PSMD3O43242 534 aa17.29■□□□□ 0.36
PTPN7-209ENST00000477554 OR1I1O60431 355 aa17.29■□□□□ 0.36
PTPN7-209ENST00000477554 PRAMEF10O60809 474 aa17.29■□□□□ 0.36
PTPN7-209ENST00000477554 AVILO75366 819 aa17.29■□□□□ 0.36
PTPN7-209ENST00000477554 POLBP06746 335 aa17.29■□□□□ 0.36
PTPN7-209ENST00000477554 FGF3P11487 239 aaPredicted RBP17.29■□□□□ 0.36
PTPN7-209ENST00000477554 ITGALP20701 1170 aa17.29■□□□□ 0.36
PTPN7-209ENST00000477554 IDSP22304 550 aa17.29■□□□□ 0.36
PTPN7-209ENST00000477554 MCM3P25205 808 aa17.29■□□□□ 0.36
PTPN7-209ENST00000477554 RPL21P46778 160 aaKnown RBP17.29■□□□□ 0.36
PTPN7-209ENST00000477554 LEPRP48357 1165 aaKnown RBP17.29■□□□□ 0.36
PTPN7-209ENST00000477554 MAPK10P53779 464 aa17.29■□□□□ 0.36
PTPN7-209ENST00000477554 SESN2P58004 480 aaPredicted RBP17.29■□□□□ 0.36
PTPN7-209ENST00000477554 CAV1Q03135 178 aa17.29■□□□□ 0.36
PTPN7-209ENST00000477554 TLE3Q04726 772 aa17.29■□□□□ 0.36
PTPN7-209ENST00000477554 DMPKQ09013 629 aa17.29■□□□□ 0.36
PTPN7-209ENST00000477554 RPE65Q16518 533 aa17.29■□□□□ 0.36
PTPN7-209ENST00000477554 TSTD2Q5T7W7 516 aa17.29■□□□□ 0.36
PTPN7-209ENST00000477554 CES3Q6UWW8 571 aa17.29■□□□□ 0.36
PTPN7-209ENST00000477554 TMEM26Q6ZUK4 368 aa17.29■□□□□ 0.36
PTPN7-209ENST00000477554 LDB1Q86U70 411 aaPredicted RBP17.29■□□□□ 0.36
PTPN7-209ENST00000477554 SPNS2Q8IVW8 549 aa17.29■□□□□ 0.36
PTPN7-209ENST00000477554 PPIL6Q8IXY8 311 aa17.29■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms