RNA–Protein interactions for RNA: ENST00000477546.5

TRAIP-206, Transcript of TRAF interacting protein, humanhuman

TSL 2

Gene TRAIP, Length 1,175 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAIP-206ENST00000477546 ZNHIT2Q9UHR6 403 aa10.22□□□□□ -0.77
TRAIP-206ENST00000477546 SBDSQ9Y3A5 250 aaKnown RBP eCLIP10.22□□□□□ -0.77
TRAIP-206ENST00000477546 PCDHGC4Q9Y5F7 938 aa10.22□□□□□ -0.77
TRAIP-206ENST00000477546 PCDHGB6Q9Y5F9 930 aa10.22□□□□□ -0.77
TRAIP-206ENST00000477546 FN1P02751 2386 aaKnown RBP10.21□□□□□ -0.77
TRAIP-206ENST00000477546 MACROD2A1Z1Q3 448 aa10.21□□□□□ -0.77
TRAIP-206ENST00000477546 KCNK1O00180 336 aa10.21□□□□□ -0.77
TRAIP-206ENST00000477546 TRAFD1O14545 582 aaPredicted RBP10.21□□□□□ -0.77
TRAIP-206ENST00000477546 PPP1R12AO14974 1030 aaPredicted RBP10.21□□□□□ -0.77
TRAIP-206ENST00000477546 FANCGO15287 622 aa10.21□□□□□ -0.77
TRAIP-206ENST00000477546 KLHL41O60662 606 aa10.21□□□□□ -0.77
TRAIP-206ENST00000477546 IPO13O94829 963 aaKnown RBP10.21□□□□□ -0.77
TRAIP-206ENST00000477546 HLA-DQB2P05538 268 aa10.21□□□□□ -0.77
TRAIP-206ENST00000477546 CDKN2BP42772 138 aa10.21□□□□□ -0.77
TRAIP-206ENST00000477546 GFERP55789 205 aa10.21□□□□□ -0.77
TRAIP-206ENST00000477546 PDE1BQ01064 536 aa10.21□□□□□ -0.77
TRAIP-206ENST00000477546 DSC2Q02487 901 aa10.21□□□□□ -0.77
TRAIP-206ENST00000477546 PPIDQ08752 370 aaKnown RBP10.21□□□□□ -0.77
TRAIP-206ENST00000477546 AP1B1Q10567 949 aa10.21□□□□□ -0.77
TRAIP-206ENST00000477546 TRAF2Q12933 501 aa10.21□□□□□ -0.77
TRAIP-206ENST00000477546 NFATC2Q13469 925 aa10.21□□□□□ -0.77
TRAIP-206ENST00000477546 TFDP2Q14188 446 aa10.21□□□□□ -0.77
TRAIP-206ENST00000477546 PDK1Q15118 436 aa10.21□□□□□ -0.77
TRAIP-206ENST00000477546 KYNUQ16719 465 aa10.21□□□□□ -0.77
TRAIP-206ENST00000477546 ARMC12Q5T9G4 340 aa10.21□□□□□ -0.77
TRAIP-206ENST00000477546 IZUMO3Q5VZ72 239 aa10.21□□□□□ -0.77
TRAIP-206ENST00000477546 SPOCD1Q6ZMY3 1216 aa10.21□□□□□ -0.77
TRAIP-206ENST00000477546 DPPA4Q7L190 304 aa10.21□□□□□ -0.77
TRAIP-206ENST00000477546 ZNF765Q7L2R6 523 aa10.21□□□□□ -0.77
TRAIP-206ENST00000477546 KATNAL2Q8IYT4 538 aa10.21□□□□□ -0.77
TRAIP-206ENST00000477546 TXLNBQ8N3L3 684 aa10.21□□□□□ -0.77
TRAIP-206ENST00000477546 TEX26Q8N6G2 289 aa10.21□□□□□ -0.77
TRAIP-206ENST00000477546 PTCD2Q8WV60 388 aaKnown RBP10.21□□□□□ -0.77
TRAIP-206ENST00000477546 MAML1Q92585 1016 aa10.21□□□□□ -0.77
TRAIP-206ENST00000477546 KRT35Q92764 455 aa10.21□□□□□ -0.77
TRAIP-206ENST00000477546 FATE1Q969F0 183 aa10.21□□□□□ -0.77
TRAIP-206ENST00000477546 SGSM3Q96HU1 749 aa10.21□□□□□ -0.77
TRAIP-206ENST00000477546 RBM41Q96IZ5 413 aaKnown RBP10.21□□□□□ -0.77
TRAIP-206ENST00000477546 NSMCE3Q96MG7 304 aa10.21□□□□□ -0.77
TRAIP-206ENST00000477546 TSGA13Q96PP4 275 aa10.21□□□□□ -0.77
TRAIP-206ENST00000477546 FOXC2Q99958 501 aa10.21□□□□□ -0.77
TRAIP-206ENST00000477546 SPOCK3Q9BQ16 436 aa10.21□□□□□ -0.77
TRAIP-206ENST00000477546 LACRTQ9GZZ8 138 aa10.21□□□□□ -0.77
TRAIP-206ENST00000477546 PHPT1Q9NRX4 125 aaPredicted RBP10.21□□□□□ -0.77
TRAIP-206ENST00000477546 RBM22Q9NW64 420 aaKnown RBP eCLIP10.21□□□□□ -0.77
TRAIP-206ENST00000477546 SNX7Q9UNH6 387 aa10.21□□□□□ -0.77
TRAIP-206ENST00000477546 DUSP10Q9Y6W6 482 aa10.21□□□□□ -0.77
TRAIP-206ENST00000477546 MYO7BQ6PIF6 2116 aa10.21□□□□□ -0.78
TRAIP-206ENST00000477546 ZGRF1Q86YA3 2104 aa10.21□□□□□ -0.78
TRAIP-206ENST00000477546 PRRC2AP48634 2157 aaKnown RBP10.21□□□□□ -0.78
TRAIP-206ENST00000477546 ZNF469Q96JG9 3925 aaPredicted RBP10.2□□□□□ -0.78
TRAIP-206ENST00000477546 TRBV23OR9-2A0A075B6M9 112 aa10.2□□□□□ -0.78
TRAIP-206ENST00000477546 A0A1W2PQ67 120 aa10.2□□□□□ -0.78
TRAIP-206ENST00000477546 BTNL10A8MVZ5 291 aa10.2□□□□□ -0.78
TRAIP-206ENST00000477546 A8MX80 341 aa10.2□□□□□ -0.78
TRAIP-206ENST00000477546 C19orf84I3L1E1 186 aa10.2□□□□□ -0.78
TRAIP-206ENST00000477546 HTRA2O43464 458 aaPredicted RBP10.2□□□□□ -0.78
TRAIP-206ENST00000477546 CST8O60676 142 aa10.2□□□□□ -0.78
TRAIP-206ENST00000477546 ZRANB2O95218 330 aaKnown RBP eCLIP10.2□□□□□ -0.78
TRAIP-206ENST00000477546 PGLSO95336 258 aa10.2□□□□□ -0.78
TRAIP-206ENST00000477546 IVLP07476 585 aa10.2□□□□□ -0.78
TRAIP-206ENST00000477546 CA4P22748 312 aa10.2□□□□□ -0.78
TRAIP-206ENST00000477546 SEPHS1P49903 392 aa10.2□□□□□ -0.78
TRAIP-206ENST00000477546 GSDMDP57764 484 aa10.2□□□□□ -0.78
TRAIP-206ENST00000477546 KIF5AQ12840 1032 aa10.2□□□□□ -0.78
TRAIP-206ENST00000477546 FOXD4Q12950 439 aaPredicted RBP10.2□□□□□ -0.78
TRAIP-206ENST00000477546 RALGDSQ12967 914 aa10.2□□□□□ -0.78
TRAIP-206ENST00000477546 ZBTB17Q13105 803 aa10.2□□□□□ -0.78
TRAIP-206ENST00000477546 MYBPC3Q14896 1274 aa10.2□□□□□ -0.78
TRAIP-206ENST00000477546 TFDP3Q5H9I0 405 aa10.2□□□□□ -0.78
TRAIP-206ENST00000477546 USP45Q70EL2 814 aa10.2□□□□□ -0.78
TRAIP-206ENST00000477546 RTTNQ86VV8 2226 aa10.2□□□□□ -0.78
TRAIP-206ENST00000477546 PELI3Q8N2H9 469 aa10.2□□□□□ -0.78
TRAIP-206ENST00000477546 HAUS1Q96CS2 278 aa10.2□□□□□ -0.78
TRAIP-206ENST00000477546 CALR3Q96L12 384 aaKnown RBP10.2□□□□□ -0.78
TRAIP-206ENST00000477546 OLFM3Q96PB7 478 aa10.2□□□□□ -0.78
TRAIP-206ENST00000477546 TEX101Q9BY14 249 aa10.2□□□□□ -0.78
TRAIP-206ENST00000477546 CEP41Q9BYV8 373 aa10.2□□□□□ -0.78
TRAIP-206ENST00000477546 LDHAL6BQ9BYZ2 381 aaPredicted RBP10.2□□□□□ -0.78
TRAIP-206ENST00000477546 PDE7BQ9NP56 450 aa10.2□□□□□ -0.78
TRAIP-206ENST00000477546 B4GALT6Q9UBX8 382 aa10.2□□□□□ -0.78
TRAIP-206ENST00000477546 AMACRQ9UHK6 382 aa10.2□□□□□ -0.78
TRAIP-206ENST00000477546 NOVA2Q9UNW9 492 aaKnown RBP10.2□□□□□ -0.78
TRAIP-206ENST00000477546 SLC17A4Q9Y2C5 497 aa10.2□□□□□ -0.78
TRAIP-206ENST00000477546 COL6A5A8TX70 2615 aa10.2□□□□□ -0.78
TRAIP-206ENST00000477546 hCG_1818297A0A087WSY0 165 aa10.19□□□□□ -0.78
TRAIP-206ENST00000477546 GRID2IPA4D2P6 1211 aa10.19□□□□□ -0.78
TRAIP-206ENST00000477546 LILRA5A6NI73 299 aa10.19□□□□□ -0.78
TRAIP-206ENST00000477546 PJA2O43164 708 aa10.19□□□□□ -0.78
TRAIP-206ENST00000477546 JRKO75564 520 aa10.19□□□□□ -0.78
TRAIP-206ENST00000477546 JCHAINP01591 159 aa10.19□□□□□ -0.78
TRAIP-206ENST00000477546 CYP2A6P11509 494 aaPredicted RBP10.19□□□□□ -0.78
TRAIP-206ENST00000477546 PECAM1P16284 738 aaPredicted RBP10.19□□□□□ -0.78
TRAIP-206ENST00000477546 CTPS1P17812 591 aa10.19□□□□□ -0.78
TRAIP-206ENST00000477546 AGAP20933 346 aa10.19□□□□□ -0.78
TRAIP-206ENST00000477546 VIPR1P32241 457 aa10.19□□□□□ -0.78
TRAIP-206ENST00000477546 CTNNA1P35221 906 aaKnown RBP10.19□□□□□ -0.78
TRAIP-206ENST00000477546 KIR3DL1P43629 444 aa10.19□□□□□ -0.78
TRAIP-206ENST00000477546 TSFMP43897 325 aaKnown RBP10.19□□□□□ -0.78
TRAIP-206ENST00000477546 NR2C2P49116 596 aa10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms