RNA–Protein interactions for RNA: ENST00000477182.5

LSM2-212, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3

Gene LSM2, Length 767 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-212ENST00000477182 ZNF284Q2VY69 593 aa11.41□□□□□ -0.58
LSM2-212ENST00000477182 MAP9Q49MG5 647 aa11.41□□□□□ -0.58
LSM2-212ENST00000477182 TMEM259Q4ZIN3 620 aa11.41□□□□□ -0.58
LSM2-212ENST00000477182 KIAA1161Q6NSJ0 714 aa11.41□□□□□ -0.58
LSM2-212ENST00000477182 GCNT7Q6ZNI0 430 aa11.41□□□□□ -0.58
LSM2-212ENST00000477182 PTAR1Q7Z6K3 402 aaPredicted RBP11.41□□□□□ -0.58
LSM2-212ENST00000477182 TECPR1Q7Z6L1 1165 aa11.41□□□□□ -0.58
LSM2-212ENST00000477182 PARGQ86W56 976 aa11.41□□□□□ -0.58
LSM2-212ENST00000477182 HORMAD1Q86X24 394 aa11.41□□□□□ -0.58
LSM2-212ENST00000477182 UNC5BQ8IZJ1 945 aa11.41□□□□□ -0.58
LSM2-212ENST00000477182 CBARPQ8N350 705 aaPredicted RBP11.41□□□□□ -0.58
LSM2-212ENST00000477182 SERBP1Q8NC51 408 aaKnown RBP eCLIP11.41□□□□□ -0.58
LSM2-212ENST00000477182 GPR26Q8NDV2 337 aa11.41□□□□□ -0.58
LSM2-212ENST00000477182 C9orf43Q8TAL5 461 aaPredicted RBP11.41□□□□□ -0.58
LSM2-212ENST00000477182 BTN2A2Q8WVV5 523 aa11.41□□□□□ -0.58
LSM2-212ENST00000477182 CAVIN3Q969G5 261 aa11.41□□□□□ -0.58
LSM2-212ENST00000477182 HDAC10Q969S8 669 aa11.41□□□□□ -0.58
LSM2-212ENST00000477182 DTD2Q96FN9 168 aa11.41□□□□□ -0.58
LSM2-212ENST00000477182 CDKN2AIPNLQ96HQ2 116 aa11.41□□□□□ -0.58
LSM2-212ENST00000477182 TBATAQ96M53 351 aa11.41□□□□□ -0.58
LSM2-212ENST00000477182 CATSPER2Q96P56 530 aa11.41□□□□□ -0.58
LSM2-212ENST00000477182 PHF12Q96QT6 1004 aa11.41□□□□□ -0.58
LSM2-212ENST00000477182 GFM1Q96RP9 751 aaKnown RBP11.41□□□□□ -0.58
LSM2-212ENST00000477182 SUDS3Q9H7L9 328 aaPredicted RBP11.41□□□□□ -0.58
LSM2-212ENST00000477182 VPS37BQ9H9H4 285 aa11.41□□□□□ -0.58
LSM2-212ENST00000477182 IL1RAPL1Q9NZN1 696 aa11.41□□□□□ -0.58
LSM2-212ENST00000477182 PISDQ9UG56 409 aa11.41□□□□□ -0.58
LSM2-212ENST00000477182 CD84Q9UIB8 345 aa11.41□□□□□ -0.58
LSM2-212ENST00000477182 HS3ST3A1Q9Y663 406 aa11.41□□□□□ -0.58
LSM2-212ENST00000477182 SPTY2D1-AS1A0A0U1RR47 76 aa11.4□□□□□ -0.58
LSM2-212ENST00000477182 CCDC162PA2VCL2 907 aa11.4□□□□□ -0.58
LSM2-212ENST00000477182 OR51F1A6NGY5 319 aa11.4□□□□□ -0.58
LSM2-212ENST00000477182 GOLGA8KD6RF30 607 aa11.4□□□□□ -0.58
LSM2-212ENST00000477182 GOLGA8TH3BQL2 631 aa11.4□□□□□ -0.58
LSM2-212ENST00000477182 ERLIN1O75477 346 aa11.4□□□□□ -0.58
LSM2-212ENST00000477182 VAPBO95292 243 aa11.4□□□□□ -0.58
LSM2-212ENST00000477182 PAMP19021 973 aa11.4□□□□□ -0.58
LSM2-212ENST00000477182 WT1P19544 449 aaPredicted RBP11.4□□□□□ -0.58
LSM2-212ENST00000477182 ARNTP27540 789 aa11.4□□□□□ -0.58
LSM2-212ENST00000477182 CCKBRP32239 447 aa11.4□□□□□ -0.58
LSM2-212ENST00000477182 SPAM1P38567 509 aa11.4□□□□□ -0.58
LSM2-212ENST00000477182 HADHAP40939 763 aa11.4□□□□□ -0.58
LSM2-212ENST00000477182 CLDN2P57739 230 aa11.4□□□□□ -0.58
LSM2-212ENST00000477182 PRAMEP78395 509 aa11.4□□□□□ -0.58
LSM2-212ENST00000477182 FGL2Q14314 439 aa11.4□□□□□ -0.58
LSM2-212ENST00000477182 FZD2Q14332 565 aa11.4□□□□□ -0.58
LSM2-212ENST00000477182 FHL5Q5TD97 284 aa11.4□□□□□ -0.58
LSM2-212ENST00000477182 KIAA0930Q6ICG6 404 aaPredicted RBP11.4□□□□□ -0.58
LSM2-212ENST00000477182 FAM151BQ6UXP7 276 aa11.4□□□□□ -0.58
LSM2-212ENST00000477182 KYAT3Q6YP21 454 aaKnown RBP11.4□□□□□ -0.58
LSM2-212ENST00000477182 C3orf62Q6ZUJ4 267 aa11.4□□□□□ -0.58
LSM2-212ENST00000477182 TRMT10CQ7L0Y3 403 aaKnown RBP11.4□□□□□ -0.58
LSM2-212ENST00000477182 B3GNT8Q7Z7M8 397 aa11.4□□□□□ -0.58
LSM2-212ENST00000477182 DTX1Q86Y01 620 aa11.4□□□□□ -0.58
LSM2-212ENST00000477182 NRSN1Q8IZ57 195 aa11.4□□□□□ -0.58
LSM2-212ENST00000477182 OR6P1Q8NGX9 317 aa11.4□□□□□ -0.58
LSM2-212ENST00000477182 UHMK1Q8TAS1 419 aaKnown RBP11.4□□□□□ -0.58
LSM2-212ENST00000477182 GSDMBQ8TAX9 411 aa11.4□□□□□ -0.58
LSM2-212ENST00000477182 LMX1AQ8TE12 382 aa11.4□□□□□ -0.58
LSM2-212ENST00000477182 UBLCP1Q8WVY7 318 aaPredicted RBP11.4□□□□□ -0.58
LSM2-212ENST00000477182 PEX13Q92968 403 aa11.4□□□□□ -0.58
LSM2-212ENST00000477182 SCAMP4Q969E2 229 aa11.4□□□□□ -0.58
LSM2-212ENST00000477182 NUS1Q96E22 293 aa11.4□□□□□ -0.58
LSM2-212ENST00000477182 TTC25Q96NG3 672 aa11.4□□□□□ -0.58
LSM2-212ENST00000477182 RIOK2Q9BVS4 552 aaKnown RBP11.4□□□□□ -0.58
LSM2-212ENST00000477182 C1QTNF2Q9BXJ5 285 aa11.4□□□□□ -0.58
LSM2-212ENST00000477182 SLC12A9Q9BXP2 914 aa11.4□□□□□ -0.58
LSM2-212ENST00000477182 SLC17A9Q9BYT1 436 aa11.4□□□□□ -0.58
LSM2-212ENST00000477182 B3GNT4Q9C0J1 378 aa11.4□□□□□ -0.58
LSM2-212ENST00000477182 ABCG8Q9H221 673 aa11.4□□□□□ -0.58
LSM2-212ENST00000477182 FZD3Q9NPG1 666 aa11.4□□□□□ -0.58
LSM2-212ENST00000477182 GPR27Q9NS67 375 aa11.4□□□□□ -0.58
LSM2-212ENST00000477182 SPASTQ9UBP0 616 aa11.4□□□□□ -0.58
LSM2-212ENST00000477182 PADI4Q9UM07 663 aa11.4□□□□□ -0.58
LSM2-212ENST00000477182 FAM169AQ9Y6X4 670 aa11.4□□□□□ -0.58
LSM2-212ENST00000477182 PIKFYVEQ9Y2I7 2098 aa11.39□□□□□ -0.59
LSM2-212ENST00000477182 PRAMEF33A0A0G2JMD5 474 aa11.39□□□□□ -0.59
LSM2-212ENST00000477182 RGSL1A5PLK6 1076 aa11.39□□□□□ -0.59
LSM2-212ENST00000477182 D6RAR5 112 aa11.39□□□□□ -0.59
LSM2-212ENST00000477182 GAPDHSO14556 408 aaPredicted RBP11.39□□□□□ -0.59
LSM2-212ENST00000477182 RIPK2O43353 540 aa11.39□□□□□ -0.59
LSM2-212ENST00000477182 PRAMEF10O60809 474 aa11.39□□□□□ -0.59
LSM2-212ENST00000477182 GOT2P00505 430 aaKnown RBP11.39□□□□□ -0.59
LSM2-212ENST00000477182 GSTA2P09210 222 aa11.39□□□□□ -0.59
LSM2-212ENST00000477182 ERVK-10P10266 1014 aa11.39□□□□□ -0.59
LSM2-212ENST00000477182 HGFP14210 728 aa11.39□□□□□ -0.59
LSM2-212ENST00000477182 TSHRP16473 764 aa11.39□□□□□ -0.59
LSM2-212ENST00000477182 JUNDP17535 347 aa11.39□□□□□ -0.59
LSM2-212ENST00000477182 MC4RP32245 332 aa11.39□□□□□ -0.59
LSM2-212ENST00000477182 RABIFP47224 123 aa11.39□□□□□ -0.59
LSM2-212ENST00000477182 ARCN1P48444 511 aaKnown RBP11.39□□□□□ -0.59
LSM2-212ENST00000477182 DCDC1P59894 354 aa11.39□□□□□ -0.59
LSM2-212ENST00000477182 XIAPP98170 497 aa11.39□□□□□ -0.59
LSM2-212ENST00000477182 SGCGQ13326 291 aa11.39□□□□□ -0.59
LSM2-212ENST00000477182 PEX6Q13608 980 aa11.39□□□□□ -0.59
LSM2-212ENST00000477182 CHRNA6Q15825 494 aa11.39□□□□□ -0.59
LSM2-212ENST00000477182 UAP1Q16222 522 aaPredicted RBP11.39□□□□□ -0.59
LSM2-212ENST00000477182 LONRF1Q17RB8 773 aa11.39□□□□□ -0.59
LSM2-212ENST00000477182 HENMT1Q5T8I9 393 aaKnown RBP11.39□□□□□ -0.59
LSM2-212ENST00000477182 TRMT10BQ6PF06 316 aaKnown RBP11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms