RNA–Protein interactions for RNA: ENST00000476772.5

VEGFA-211, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 1,683 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-211ENST00000476772 KPNA5O15131 536 aa28.35■■■□□ 2.13
VEGFA-211ENST00000476772 VEGFDO43915 354 aa28.35■■■□□ 2.13
VEGFA-211ENST00000476772 SNX3O60493 162 aa28.35■■■□□ 2.13
VEGFA-211ENST00000476772 SUPT3HO75486 399 aa28.35■■■□□ 2.13
VEGFA-211ENST00000476772 TPBGLP0DKB5 382 aa28.35■■■□□ 2.13
VEGFA-211ENST00000476772 ZNF8P17098 575 aaPredicted RBP28.35■■■□□ 2.13
VEGFA-211ENST00000476772 TEAD1P28347 426 aa28.35■■■□□ 2.13
VEGFA-211ENST00000476772 ABCE1P61221 599 aaKnown RBP28.35■■■□□ 2.13
VEGFA-211ENST00000476772 ASPHQ12797 758 aa28.35■■■□□ 2.13
VEGFA-211ENST00000476772 PLEKHS1Q5SXH7 462 aa28.35■■■□□ 2.13
VEGFA-211ENST00000476772 GKAP1Q5VSY0 366 aaPredicted RBP28.35■■■□□ 2.13
VEGFA-211ENST00000476772 CYHR1Q6ZMK1 362 aa28.35■■■□□ 2.13
VEGFA-211ENST00000476772 SLC22A9Q8IVM8 553 aa28.35■■■□□ 2.13
VEGFA-211ENST00000476772 GRAMD1AQ96CP6 724 aa28.35■■■□□ 2.13
VEGFA-211ENST00000476772 THOC1Q96FV9 657 aaKnown RBP28.35■■■□□ 2.13
VEGFA-211ENST00000476772 TMEM237Q96Q45 408 aa28.35■■■□□ 2.13
VEGFA-211ENST00000476772 TEX101Q9BY14 249 aa28.35■■■□□ 2.13
VEGFA-211ENST00000476772 WDR26Q9H7D7 661 aa28.35■■■□□ 2.13
VEGFA-211ENST00000476772 SGK2Q9HBY8 427 aa28.35■■■□□ 2.13
VEGFA-211ENST00000476772 FAM8A1Q9UBU6 413 aa28.35■■■□□ 2.13
VEGFA-211ENST00000476772 MUTYHQ9UIF7 546 aa28.35■■■□□ 2.13
VEGFA-211ENST00000476772 OR1A2Q9Y585 309 aa28.35■■■□□ 2.13
VEGFA-211ENST00000476772 TRIOO75962 3097 aa28.35■■■□□ 2.13
VEGFA-211ENST00000476772 CCDC189A1A4V9 331 aa28.35■■■□□ 2.13
VEGFA-211ENST00000476772 SLC31A1O15431 190 aa28.35■■■□□ 2.13
VEGFA-211ENST00000476772 LILRB5O75023 590 aa28.35■■■□□ 2.13
VEGFA-211ENST00000476772 IGFALSP35858 605 aa28.35■■■□□ 2.13
VEGFA-211ENST00000476772 TRIM23P36406 574 aa28.35■■■□□ 2.13
VEGFA-211ENST00000476772 DOK6Q6PKX4 331 aa28.35■■■□□ 2.13
VEGFA-211ENST00000476772 TRAPPC5Q8IUR0 188 aa28.35■■■□□ 2.13
VEGFA-211ENST00000476772 CCM2Q9BSQ5 444 aa28.35■■■□□ 2.13
VEGFA-211ENST00000476772 LRRC72A6NJI9 287 aa28.34■■■□□ 2.13
VEGFA-211ENST00000476772 SYCE1LA8MT33 242 aa28.34■■■□□ 2.13
VEGFA-211ENST00000476772 TMEM114B3SHH9 223 aa28.34■■■□□ 2.13
VEGFA-211ENST00000476772 EIF3FO00303 357 aaPredicted RBP28.34■■■□□ 2.13
VEGFA-211ENST00000476772 ENO3P13929 434 aaPredicted RBP28.34■■■□□ 2.13
VEGFA-211ENST00000476772 PBLDP30039 288 aaPredicted RBP28.34■■■□□ 2.13
VEGFA-211ENST00000476772 NFKB2Q00653 900 aa28.34■■■□□ 2.13
VEGFA-211ENST00000476772 SBSNQ6UWP8 590 aa28.34■■■□□ 2.13
VEGFA-211ENST00000476772 SPATA21Q7Z572 469 aa28.34■■■□□ 2.13
VEGFA-211ENST00000476772 ADAMTSL2Q86TH1 951 aa28.34■■■□□ 2.13
VEGFA-211ENST00000476772 TRIM69Q86WT6 500 aa28.34■■■□□ 2.13
VEGFA-211ENST00000476772 VRK3Q8IV63 474 aa28.34■■■□□ 2.13
VEGFA-211ENST00000476772 ASB12Q8WXK4 309 aa28.34■■■□□ 2.13
VEGFA-211ENST00000476772 MYOCQ99972 504 aa28.34■■■□□ 2.13
VEGFA-211ENST00000476772 CYP8B1Q9UNU6 501 aa28.34■■■□□ 2.13
VEGFA-211ENST00000476772 CDYLQ9Y232 598 aa28.34■■■□□ 2.13
VEGFA-211ENST00000476772 STK25O00506 426 aa28.33■■■□□ 2.13
VEGFA-211ENST00000476772 IGLV3-19P01714 112 aa28.33■■■□□ 2.13
VEGFA-211ENST00000476772 HK3P52790 923 aa28.33■■■□□ 2.13
VEGFA-211ENST00000476772 GPSM1Q86YR5 675 aa28.33■■■□□ 2.13
VEGFA-211ENST00000476772 CCNYL1Q8N7R7 359 aa28.33■■■□□ 2.13
VEGFA-211ENST00000476772 PTGR2Q8N8N7 351 aaPredicted RBP28.33■■■□□ 2.13
VEGFA-211ENST00000476772 SEC16BQ96JE7 1060 aa28.33■■■□□ 2.13
VEGFA-211ENST00000476772 SORT1Q99523 831 aa28.33■■■□□ 2.13
VEGFA-211ENST00000476772 ADAMTS6Q9UKP5 1117 aa28.33■■■□□ 2.13
VEGFA-211ENST00000476772 NUAK1O60285 661 aa28.32■■■□□ 2.12
VEGFA-211ENST00000476772 GPC4O75487 556 aa28.32■■■□□ 2.12
VEGFA-211ENST00000476772 SEMA4FO95754 770 aa28.32■■■□□ 2.12
VEGFA-211ENST00000476772 GFAPP14136 432 aa28.32■■■□□ 2.12
VEGFA-211ENST00000476772 PFKFB4Q16877 469 aa28.32■■■□□ 2.12
VEGFA-211ENST00000476772 ZNF547Q8IVP9 402 aa28.32■■■□□ 2.12
VEGFA-211ENST00000476772 PJA1Q8NG27 643 aa28.32■■■□□ 2.12
VEGFA-211ENST00000476772 ASZ1Q8WWH4 475 aa28.32■■■□□ 2.12
VEGFA-211ENST00000476772 FAM126AQ9BYI3 521 aaPredicted RBP28.32■■■□□ 2.12
VEGFA-211ENST00000476772 NCF1BA6NI72 391 aaPredicted RBP28.32■■■□□ 2.12
VEGFA-211ENST00000476772 NCF1CA8MVU1 366 aaPredicted RBP28.32■■■□□ 2.12
VEGFA-211ENST00000476772 NCF1P14598 390 aaPredicted RBP28.32■■■□□ 2.12
VEGFA-211ENST00000476772 CCR10P46092 362 aa28.32■■■□□ 2.12
VEGFA-211ENST00000476772 CRTC3Q6UUV7 619 aa28.32■■■□□ 2.12
VEGFA-211ENST00000476772 CRLF3Q8IUI8 442 aa28.32■■■□□ 2.12
VEGFA-211ENST00000476772 FBXO39Q8N4B4 442 aa28.32■■■□□ 2.12
VEGFA-211ENST00000476772 ZNF514Q96K75 400 aaPredicted RBP28.32■■■□□ 2.12
VEGFA-211ENST00000476772 DRC3Q9H069 523 aa28.32■■■□□ 2.12
VEGFA-211ENST00000476772 NPHS2Q9NP85 383 aa28.32■■■□□ 2.12
VEGFA-211ENST00000476772 PHPT1Q9NRX4 125 aaPredicted RBP28.32■■■□□ 2.12
VEGFA-211ENST00000476772 UTP6Q9NYH9 597 aaKnown RBP28.32■■■□□ 2.12
VEGFA-211ENST00000476772 PCYT1BQ9Y5K3 369 aaPredicted RBP28.32■■■□□ 2.12
VEGFA-211ENST00000476772 HSPA4LO95757 839 aa28.31■■■□□ 2.12
VEGFA-211ENST00000476772 RCN2Q14257 317 aa28.31■■■□□ 2.12
VEGFA-211ENST00000476772 TGFBIQ15582 683 aa28.31■■■□□ 2.12
VEGFA-211ENST00000476772 PPP1R3AQ16821 1122 aa28.31■■■□□ 2.12
VEGFA-211ENST00000476772 SYTL3Q4VX76 610 aa28.31■■■□□ 2.12
VEGFA-211ENST00000476772 FRA10AC1Q70Z53 315 aa28.31■■■□□ 2.12
VEGFA-211ENST00000476772 LILRA3Q8N6C8 439 aaPredicted RBP28.31■■■□□ 2.12
VEGFA-211ENST00000476772 CD320Q9NPF0 282 aa28.31■■■□□ 2.12
VEGFA-211ENST00000476772 GULP1Q9UBP9 304 aa28.31■■■□□ 2.12
VEGFA-211ENST00000476772 GPR34Q9UPC5 381 aa28.31■■■□□ 2.12
VEGFA-211ENST00000476772 CHRNGP07510 517 aa28.3■■■□□ 2.12
VEGFA-211ENST00000476772 MPC1LP0DKB6 136 aa28.3■■■□□ 2.12
VEGFA-211ENST00000476772 TROVE2P10155 538 aaKnown RBP eCLIP28.3■■■□□ 2.123e-17■■■□□ 18.6
VEGFA-211ENST00000476772 IMPDH1P20839 514 aa28.3■■■□□ 2.12
VEGFA-211ENST00000476772 ZNF658BQ4V348 819 aaPredicted RBP28.3■■■□□ 2.12
VEGFA-211ENST00000476772 CFAP157Q5JU67 520 aa28.3■■■□□ 2.12
VEGFA-211ENST00000476772 CACNA2D3Q8IZS8 1091 aa28.3■■■□□ 2.12
VEGFA-211ENST00000476772 PPP4R1Q8TF05 950 aa28.3■■■□□ 2.12
VEGFA-211ENST00000476772 FOXJ1Q92949 421 aa28.3■■■□□ 2.12
VEGFA-211ENST00000476772 CLDN23Q96B33 292 aa28.3■■■□□ 2.12
VEGFA-211ENST00000476772 L3HYPDHQ96EM0 354 aa28.3■■■□□ 2.12
VEGFA-211ENST00000476772 CHRDQ9H2X0 955 aa28.3■■■□□ 2.12
Retrieved 100 of 20,778 RNA–protein pairs in 209.6 ms