RNA–Protein interactions for RNA: ENST00000476379.5

CCDC39-204, Transcript of coiled-coil domain containing 39, humanhuman

TSL 2

Gene CCDC39, Length 4,451 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-204ENST00000476379 SLC13A2Q13183 592 aa4.93□□□□□ -1.62
CCDC39-204ENST00000476379 SHHQ15465 462 aa4.93□□□□□ -1.62
CCDC39-204ENST00000476379 SYTL3Q4VX76 610 aa4.93□□□□□ -1.62
CCDC39-204ENST00000476379 PAGE3Q5JUK9 113 aa4.93□□□□□ -1.62
CCDC39-204ENST00000476379 IER5LQ5T953 404 aa4.93□□□□□ -1.62
CCDC39-204ENST00000476379 AGMOQ6ZNB7 445 aa4.93□□□□□ -1.62
CCDC39-204ENST00000476379 Q6ZPB1 254 aaPredicted RBP4.93□□□□□ -1.62
CCDC39-204ENST00000476379 ANKS3Q6ZW76 656 aa4.93□□□□□ -1.62
CCDC39-204ENST00000476379 SLCO6A1Q86UG4 719 aa4.93□□□□□ -1.62
CCDC39-204ENST00000476379 UNC93AQ86WB7 457 aa4.93□□□□□ -1.62
CCDC39-204ENST00000476379 MFSD6LQ8IWD5 586 aa4.93□□□□□ -1.62
CCDC39-204ENST00000476379 POC5Q8NA72 575 aa4.93□□□□□ -1.62
CCDC39-204ENST00000476379 SMYD1Q8NB12 490 aa4.93□□□□□ -1.62
CCDC39-204ENST00000476379 ZMIZ2Q8NF64 920 aa4.93□□□□□ -1.62
CCDC39-204ENST00000476379 OR2T34Q8NGX1 318 aa4.93□□□□□ -1.62
CCDC39-204ENST00000476379 OR2T3Q8NH03 318 aa4.93□□□□□ -1.62
CCDC39-204ENST00000476379 VANGL1Q8TAA9 524 aaPredicted RBP4.93□□□□□ -1.62
CCDC39-204ENST00000476379 SPPL2BQ8TCT7 592 aa4.93□□□□□ -1.62
CCDC39-204ENST00000476379 ARSGQ96EG1 525 aa4.93□□□□□ -1.62
CCDC39-204ENST00000476379 REXO5Q96IC2 774 aaKnown RBP4.93□□□□□ -1.62
CCDC39-204ENST00000476379 HERC2P3Q9BVR0 1158 aa4.93□□□□□ -1.62
CCDC39-204ENST00000476379 BOCQ9BWV1 1114 aa4.93□□□□□ -1.62
CCDC39-204ENST00000476379 NDEL1Q9GZM8 345 aa4.93□□□□□ -1.62
CCDC39-204ENST00000476379 OSBPL2Q9H1P3 480 aa4.93□□□□□ -1.62
CCDC39-204ENST00000476379 ZFYVE1Q9HBF4 777 aa4.93□□□□□ -1.62
CCDC39-204ENST00000476379 TBC1D13Q9NVG8 400 aa4.93□□□□□ -1.62
CCDC39-204ENST00000476379 IMPAD1Q9NX62 359 aa4.93□□□□□ -1.62
CCDC39-204ENST00000476379 CNTN3Q9P232 1028 aa4.93□□□□□ -1.62
CCDC39-204ENST00000476379 UBA2Q9UBT2 640 aaPredicted RBP4.93□□□□□ -1.62
CCDC39-204ENST00000476379 CNTN6Q9UQ52 1028 aa4.93□□□□□ -1.62
CCDC39-204ENST00000476379 DYTNA2CJ06 578 aa4.92□□□□□ -1.62
CCDC39-204ENST00000476379 HACD1B0YJ81 288 aa4.92□□□□□ -1.62
CCDC39-204ENST00000476379 H3BQ06 376 aaPredicted RBP4.92□□□□□ -1.62
CCDC39-204ENST00000476379 TLL1O43897 1013 aa4.92□□□□□ -1.62
CCDC39-204ENST00000476379 DFNA5O60443 496 aa4.92□□□□□ -1.62
CCDC39-204ENST00000476379 ECI2O75521 394 aa4.92□□□□□ -1.62
CCDC39-204ENST00000476379 RFPL2O75678 378 aa4.92□□□□□ -1.62
CCDC39-204ENST00000476379 PRKD3O94806 890 aa4.92□□□□□ -1.62
CCDC39-204ENST00000476379 PGLSO95336 258 aa4.92□□□□□ -1.62
CCDC39-204ENST00000476379 GJB5O95377 273 aa4.92□□□□□ -1.62
CCDC39-204ENST00000476379 UGT2B4P06133 528 aa4.92□□□□□ -1.62
CCDC39-204ENST00000476379 APOA4P06727 396 aa4.92□□□□□ -1.62
CCDC39-204ENST00000476379 FSHRP23945 695 aa4.92□□□□□ -1.62
CCDC39-204ENST00000476379 PTPN9P43378 593 aa4.92□□□□□ -1.62
CCDC39-204ENST00000476379 HSPA13P48723 471 aa4.92□□□□□ -1.62
CCDC39-204ENST00000476379 PRIM2P49643 509 aa4.92□□□□□ -1.62
CCDC39-204ENST00000476379 HK2P52789 917 aa4.92□□□□□ -1.62
CCDC39-204ENST00000476379 ARHGEF6Q15052 776 aa4.92□□□□□ -1.62
CCDC39-204ENST00000476379 OR4D1Q15615 310 aa4.92□□□□□ -1.62
CCDC39-204ENST00000476379 SPDYE7PQ495Y7 208 aa4.92□□□□□ -1.62
CCDC39-204ENST00000476379 AARS2Q5JTZ9 985 aaKnown RBP4.92□□□□□ -1.62
CCDC39-204ENST00000476379 SPANXN4Q5MJ08 99 aa4.92□□□□□ -1.62
CCDC39-204ENST00000476379 STXBP5Q5T5C0 1151 aa4.92□□□□□ -1.62
CCDC39-204ENST00000476379 PSAPL1Q6NUJ1 521 aa4.92□□□□□ -1.62
CCDC39-204ENST00000476379 CRTC3Q6UUV7 619 aa4.92□□□□□ -1.62
CCDC39-204ENST00000476379 GPRIN3Q6ZVF9 776 aa4.92□□□□□ -1.62
CCDC39-204ENST00000476379 CLYBLQ8N0X4 340 aa4.92□□□□□ -1.62
CCDC39-204ENST00000476379 TTC39CQ8N584 583 aa4.92□□□□□ -1.62
CCDC39-204ENST00000476379 ATP6V0D2Q8N8Y2 350 aa4.92□□□□□ -1.62
CCDC39-204ENST00000476379 Q8N9G6 341 aaPredicted RBP4.92□□□□□ -1.62
CCDC39-204ENST00000476379 FRS2Q8WU20 508 aa4.92□□□□□ -1.62
CCDC39-204ENST00000476379 NELL1Q92832 810 aa4.92□□□□□ -1.62
CCDC39-204ENST00000476379 TEX37Q96LM6 180 aa4.92□□□□□ -1.62
CCDC39-204ENST00000476379 NPY6RQ99463 290 aa4.92□□□□□ -1.62
CCDC39-204ENST00000476379 TTTY10Q9BZA0 68 aa4.92□□□□□ -1.62
CCDC39-204ENST00000476379 ZYG11BQ9C0D3 744 aa4.92□□□□□ -1.62
CCDC39-204ENST00000476379 POLR3BQ9NW08 1133 aaPredicted RBP4.92□□□□□ -1.62
CCDC39-204ENST00000476379 CHCHD3Q9NX63 227 aaKnown RBP4.92□□□□□ -1.62
CCDC39-204ENST00000476379 ATXN10Q9UBB4 475 aa4.92□□□□□ -1.62
CCDC39-204ENST00000476379 TRHDEQ9UKU6 1024 aa4.92□□□□□ -1.62
CCDC39-204ENST00000476379 DNAJC15Q9Y5T4 150 aa4.92□□□□□ -1.62
CCDC39-204ENST00000476379 PTPRFP10586 1907 aa4.92□□□□□ -1.62
CCDC39-204ENST00000476379 TCRBV5S1A1TA0A578 114 aa4.92□□□□□ -1.62
CCDC39-204ENST00000476379 MTSS1O43312 755 aa4.92□□□□□ -1.62
CCDC39-204ENST00000476379 HTRA2O43464 458 aaPredicted RBP4.92□□□□□ -1.62
CCDC39-204ENST00000476379 SNNO75324 88 aaPredicted RBP4.92□□□□□ -1.62
CCDC39-204ENST00000476379 H6PDO95479 791 aa4.92□□□□□ -1.62
CCDC39-204ENST00000476379 TFAP2AP05549 437 aa4.92□□□□□ -1.62
CCDC39-204ENST00000476379 SLC5A2P31639 672 aa4.92□□□□□ -1.62
CCDC39-204ENST00000476379 RPS9P46781 194 aaKnown RBP4.92□□□□□ -1.62
CCDC39-204ENST00000476379 TPTEP56180 551 aa4.92□□□□□ -1.62
CCDC39-204ENST00000476379 NAB1Q13506 487 aa4.92□□□□□ -1.62
CCDC39-204ENST00000476379 KRT33BQ14525 404 aa4.92□□□□□ -1.62
CCDC39-204ENST00000476379 SQLEQ14534 574 aa4.92□□□□□ -1.62
CCDC39-204ENST00000476379 MED22Q15528 200 aa4.92□□□□□ -1.62
CCDC39-204ENST00000476379 DGKKQ5KSL6 1271 aa4.92□□□□□ -1.62
CCDC39-204ENST00000476379 TSTD2Q5T7W7 516 aa4.92□□□□□ -1.62
CCDC39-204ENST00000476379 DEPDC1Q5TB30 811 aa4.92□□□□□ -1.62
CCDC39-204ENST00000476379 TYW3Q6IPR3 259 aaKnown RBP4.92□□□□□ -1.62
CCDC39-204ENST00000476379 KLHL35Q6PF15 583 aa4.92□□□□□ -1.62
CCDC39-204ENST00000476379 ENPP6Q6UWR7 440 aa4.92□□□□□ -1.62
CCDC39-204ENST00000476379 TMC5Q6UXY8 1006 aa4.92□□□□□ -1.62
CCDC39-204ENST00000476379 RETREG3Q86VR2 466 aa4.92□□□□□ -1.62
CCDC39-204ENST00000476379 CPSF7Q8N684 471 aaKnown RBP4.92□□□□□ -1.62
CCDC39-204ENST00000476379 OR2T12Q8NG77 320 aa4.92□□□□□ -1.62
CCDC39-204ENST00000476379 STAG3L4Q8TBR4 150 aa4.92□□□□□ -1.62
CCDC39-204ENST00000476379 LINC01599Q8WXQ3 324 aa4.92□□□□□ -1.62
CCDC39-204ENST00000476379 UBE2FQ969M7 185 aa4.92□□□□□ -1.62
CCDC39-204ENST00000476379 COL26A1Q96A83 441 aa4.92□□□□□ -1.62
CCDC39-204ENST00000476379 HNRNPABQ99729 332 aaKnown RBP4.92□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms