RNA–Protein interactions for RNA: ENST00000475482.5

CPSF3-203, Transcript of cleavage and polyadenylation specific factor 3, humanhuman

TSL 4

Gene CPSF3, Length 871 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF3-203ENST00000475482 TCAF1Q9Y4C2 921 aa15.43■□□□□ 0.06
CPSF3-203ENST00000475482 FAM169AQ9Y6X4 670 aa15.43■□□□□ 0.06
CPSF3-203ENST00000475482 BPTFQ12830 3046 aa15.43■□□□□ 0.06
CPSF3-203ENST00000475482 C1orf232A0A0U1RR37 186 aa15.42■□□□□ 0.06
CPSF3-203ENST00000475482 D6RAR5 112 aa15.42■□□□□ 0.06
CPSF3-203ENST00000475482 POC1B-GALNT4F8VUJ3 575 aa15.42■□□□□ 0.06
CPSF3-203ENST00000475482 CRTAMO95727 393 aa15.42■□□□□ 0.06
CPSF3-203ENST00000475482 INHBAP08476 426 aa15.42■□□□□ 0.06
CPSF3-203ENST00000475482 ITPKBP27987 946 aa15.42■□□□□ 0.06
CPSF3-203ENST00000475482 MLLT3P42568 568 aaPredicted RBP15.42■□□□□ 0.06
CPSF3-203ENST00000475482 GNPDA1P46926 289 aa15.42■□□□□ 0.06
CPSF3-203ENST00000475482 CCL7P80098 99 aa15.42■□□□□ 0.06
CPSF3-203ENST00000475482 PDE1BQ01064 536 aa15.42■□□□□ 0.06
CPSF3-203ENST00000475482 CTBSQ01459 385 aa15.42■□□□□ 0.06
CPSF3-203ENST00000475482 MGAT5Q09328 741 aa15.42■□□□□ 0.06
CPSF3-203ENST00000475482 ILF3Q12906 894 aaKnown RBP eCLIP15.42■□□□□ 0.06
CPSF3-203ENST00000475482 SEPT6Q14141 434 aa15.42■□□□□ 0.06
CPSF3-203ENST00000475482 LONRF1Q17RB8 773 aa15.42■□□□□ 0.06
CPSF3-203ENST00000475482 ANKRD20A4Q4UJ75 823 aa15.42■□□□□ 0.06
CPSF3-203ENST00000475482 SPRED1Q7Z699 444 aa15.42■□□□□ 0.06
CPSF3-203ENST00000475482 PDZD3Q86UT5 571 aa15.42■□□□□ 0.06
CPSF3-203ENST00000475482 EPS8L3Q8TE67 593 aaKnown RBP15.42■□□□□ 0.06
CPSF3-203ENST00000475482 LIN37Q96GY3 246 aaPredicted RBP15.42■□□□□ 0.06
CPSF3-203ENST00000475482 DPEP2Q9H4A9 486 aa15.42■□□□□ 0.06
CPSF3-203ENST00000475482 PPANQ9NQ55 473 aaKnown RBP15.42■□□□□ 0.06
CPSF3-203ENST00000475482 NSMCE4AQ9NXX6 385 aa15.42■□□□□ 0.06
CPSF3-203ENST00000475482 MOCS1Q9NZB8 636 aa15.42■□□□□ 0.06
CPSF3-203ENST00000475482 TAAR2Q9P1P5 351 aa15.42■□□□□ 0.06
CPSF3-203ENST00000475482 TXNDC16Q9P2K2 825 aa15.42■□□□□ 0.06
CPSF3-203ENST00000475482 LGALS13Q9UHV8 139 aa15.42■□□□□ 0.06
CPSF3-203ENST00000475482 SATB2Q9UPW6 733 aa15.42■□□□□ 0.06
CPSF3-203ENST00000475482 RNF215Q9Y6U7 377 aa15.42■□□□□ 0.06
CPSF3-203ENST00000475482 SMIM23A6NLE4 172 aa15.41■□□□□ 0.06
CPSF3-203ENST00000475482 FADS2P1A8MWK0 482 aa15.41■□□□□ 0.06
CPSF3-203ENST00000475482 CDRT15L2A8MXV6 281 aa15.41■□□□□ 0.06
CPSF3-203ENST00000475482 DNAJC6O75061 913 aa15.41■□□□□ 0.06
CPSF3-203ENST00000475482 RPLP0P05388 317 aaKnown RBP15.41■□□□□ 0.06
CPSF3-203ENST00000475482 AK4P27144 223 aaPredicted RBP15.41■□□□□ 0.06
CPSF3-203ENST00000475482 OAS2P29728 719 aaKnown RBP15.41■□□□□ 0.06
CPSF3-203ENST00000475482 CCKBRP32239 447 aa15.41■□□□□ 0.06
CPSF3-203ENST00000475482 CHRNA4P43681 627 aa15.41■□□□□ 0.06
CPSF3-203ENST00000475482 DCDC1P59894 354 aa15.41■□□□□ 0.06
CPSF3-203ENST00000475482 B4GALNT1Q00973 533 aa15.41■□□□□ 0.06
CPSF3-203ENST00000475482 ZFP36L1Q07352 338 aaKnown RBP15.41■□□□□ 0.06
CPSF3-203ENST00000475482 GALNT3Q14435 633 aa15.41■□□□□ 0.06
CPSF3-203ENST00000475482 KBTBD12Q3ZCT8 623 aa15.41■□□□□ 0.06
CPSF3-203ENST00000475482 UBAP2Q5T6F2 1119 aaKnown RBP15.41■□□□□ 0.06
CPSF3-203ENST00000475482 PDPK2PQ6A1A2 396 aa15.41■□□□□ 0.06
CPSF3-203ENST00000475482 B3GNT8Q7Z7M8 397 aa15.41■□□□□ 0.06
CPSF3-203ENST00000475482 SLC26A11Q86WA9 606 aa15.41■□□□□ 0.06
CPSF3-203ENST00000475482 CTAGE3PQ8IX95 158 aa15.41■□□□□ 0.06
CPSF3-203ENST00000475482 NAGSQ8N159 534 aa15.41■□□□□ 0.06
CPSF3-203ENST00000475482 BRSK1Q8TDC3 778 aa15.41■□□□□ 0.06
CPSF3-203ENST00000475482 ZDHHC1Q8WTX9 485 aa15.41■□□□□ 0.06
CPSF3-203ENST00000475482 CERS2Q96G23 380 aa15.41■□□□□ 0.06
CPSF3-203ENST00000475482 DCBLD2Q96PD2 775 aa15.41■□□□□ 0.06
CPSF3-203ENST00000475482 OR2M4Q96R27 311 aa15.41■□□□□ 0.06
CPSF3-203ENST00000475482 CDH19Q9H159 772 aa15.41■□□□□ 0.06
CPSF3-203ENST00000475482 FAM83DQ9H4H8 585 aa15.41■□□□□ 0.06
CPSF3-203ENST00000475482 ZFYVE1Q9HBF4 777 aa15.41■□□□□ 0.06
CPSF3-203ENST00000475482 CHRAC1Q9NRG0 131 aa15.41■□□□□ 0.06
CPSF3-203ENST00000475482 PKD2L2Q9NZM6 624 aa15.41■□□□□ 0.06
CPSF3-203ENST00000475482 ZFATQ9P243 1243 aa15.41■□□□□ 0.06
CPSF3-203ENST00000475482 LRIT1Q9P2V4 623 aa15.41■□□□□ 0.06
CPSF3-203ENST00000475482 RIMKLBQ9ULI2 386 aa15.41■□□□□ 0.06
CPSF3-203ENST00000475482 SSUH2Q9Y2M2 353 aa15.41■□□□□ 0.06
CPSF3-203ENST00000475482 TMEM98Q9Y2Y6 226 aa15.41■□□□□ 0.06
CPSF3-203ENST00000475482 OAS3Q9Y6K5 1087 aaKnown RBP15.41■□□□□ 0.06
CPSF3-203ENST00000475482 CCDC187A0A096LP49 1063 aa15.4■□□□□ 0.06
CPSF3-203ENST00000475482 IQANK1A0A1B0GTG1 560 aa15.4■□□□□ 0.06
CPSF3-203ENST00000475482 FAM159BA6NKW6 160 aa15.4■□□□□ 0.06
CPSF3-203ENST00000475482 C2orf81A6NN90 581 aa15.4■□□□□ 0.06
CPSF3-203ENST00000475482 B4DGG1 531 aa15.4■□□□□ 0.06
CPSF3-203ENST00000475482 TMX2-CTNND1H3BSU7 103 aa15.4■□□□□ 0.06
CPSF3-203ENST00000475482 RRP8O43159 456 aaKnown RBP15.4■□□□□ 0.06
CPSF3-203ENST00000475482 B4GAT1O43505 415 aa15.4■□□□□ 0.06
CPSF3-203ENST00000475482 CNTFP26441 200 aa15.4■□□□□ 0.06
CPSF3-203ENST00000475482 ABCG1P45844 678 aa15.4■□□□□ 0.06
CPSF3-203ENST00000475482 SLCO1A2P46721 670 aa15.4■□□□□ 0.06
CPSF3-203ENST00000475482 SERPINB9P50453 376 aa15.4■□□□□ 0.06
CPSF3-203ENST00000475482 ILF2Q12905 390 aaKnown RBP15.4■□□□□ 0.06
CPSF3-203ENST00000475482 EIF3IQ13347 325 aaKnown RBP15.4■□□□□ 0.06
CPSF3-203ENST00000475482 LRP8Q14114 963 aa15.4■□□□□ 0.06
CPSF3-203ENST00000475482 SKIDA1Q1XH10 827 aa15.4■□□□□ 0.06
CPSF3-203ENST00000475482 C3orf38Q5JPI3 329 aa15.4■□□□□ 0.06
CPSF3-203ENST00000475482 ADGRD1Q6QNK2 874 aa15.4■□□□□ 0.06
CPSF3-203ENST00000475482 LYSMD3Q7Z3D4 306 aa15.4■□□□□ 0.06
CPSF3-203ENST00000475482 TRIM74Q86UV6 250 aa15.4■□□□□ 0.06
CPSF3-203ENST00000475482 ARL14Q8N4G2 192 aa15.4■□□□□ 0.06
CPSF3-203ENST00000475482 ARFGAP2Q8N6H7 521 aa15.4■□□□□ 0.06
CPSF3-203ENST00000475482 WDR36Q8NI36 951 aaKnown RBP15.4■□□□□ 0.06
CPSF3-203ENST00000475482 CALML6Q8TD86 181 aa15.4■□□□□ 0.06
CPSF3-203ENST00000475482 SLC44A1Q8WWI5 657 aa15.4■□□□□ 0.06
CPSF3-203ENST00000475482 GFM1Q96RP9 751 aaKnown RBP15.4■□□□□ 0.06
CPSF3-203ENST00000475482 PAFAH2Q99487 392 aa15.4■□□□□ 0.06
CPSF3-203ENST00000475482 TRABDQ9H4I3 376 aa15.4■□□□□ 0.06
CPSF3-203ENST00000475482 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP15.4■□□□□ 0.06
CPSF3-203ENST00000475482 SENP1Q9P0U3 644 aa15.4■□□□□ 0.06
CPSF3-203ENST00000475482 ZNF180Q9UJW8 692 aa15.4■□□□□ 0.06
CPSF3-203ENST00000475482 PLEKHM1Q9Y4G2 1056 aa15.4■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms