RNA–Protein interactions for RNA: ENST00000474871.5

NPHP3-206, Transcript of nephrocystin 3, humanhuman

TSL 2

Gene NPHP3, Length 4,493 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-206ENST00000474871 PGPEP1Q9NXJ5 209 aa4.82□□□□□ -1.64
NPHP3-206ENST00000474871 BABAM2Q9NXR7 383 aa4.82□□□□□ -1.64
NPHP3-206ENST00000474871 PLK2Q9NYY3 685 aa4.82□□□□□ -1.64
NPHP3-206ENST00000474871 GMPR2Q9P2T1 348 aaKnown RBP4.82□□□□□ -1.64
NPHP3-206ENST00000474871 ASH2LQ9UBL3 628 aa4.82□□□□□ -1.64
NPHP3-206ENST00000474871 ASTN2O75129 1339 aaPredicted RBP4.82□□□□□ -1.64
NPHP3-206ENST00000474871 DLEC1Q9Y238 1755 aa4.82□□□□□ -1.64
NPHP3-206ENST00000474871 GPR89AB7ZAQ6 455 aa4.82□□□□□ -1.64
NPHP3-206ENST00000474871 H3BSA7 217 aa4.82□□□□□ -1.64
NPHP3-206ENST00000474871 ITGB1BP1O14713 200 aa4.82□□□□□ -1.64
NPHP3-206ENST00000474871 TPP1O14773 563 aa4.82□□□□□ -1.64
NPHP3-206ENST00000474871 SCAMP1O15126 338 aa4.82□□□□□ -1.64
NPHP3-206ENST00000474871 VPS4BO75351 444 aa4.82□□□□□ -1.64
NPHP3-206ENST00000474871 EIF3GO75821 320 aaKnown RBP eCLIP4.82□□□□□ -1.64
NPHP3-206ENST00000474871 SERPINA6P08185 405 aa4.82□□□□□ -1.64
NPHP3-206ENST00000474871 ADRB1P08588 477 aa4.82□□□□□ -1.64
NPHP3-206ENST00000474871 GPR89BP0CG08 455 aa4.82□□□□□ -1.64
NPHP3-206ENST00000474871 GIMD1P0DJR0 217 aa4.82□□□□□ -1.64
NPHP3-206ENST00000474871 PDHA2P29803 388 aa4.82□□□□□ -1.64
NPHP3-206ENST00000474871 AFF3P51826 1226 aaKnown RBP4.82□□□□□ -1.64
NPHP3-206ENST00000474871 CYP27A1Q02318 531 aa4.82□□□□□ -1.64
NPHP3-206ENST00000474871 TNFAIP2Q03169 654 aa4.82□□□□□ -1.64
NPHP3-206ENST00000474871 SIGLEC14Q08ET2 396 aa4.82□□□□□ -1.64
NPHP3-206ENST00000474871 GRAPQ13588 217 aa4.82□□□□□ -1.64
NPHP3-206ENST00000474871 CRY2Q49AN0 593 aa4.82□□□□□ -1.64
NPHP3-206ENST00000474871 CHST3Q7LGC8 479 aa4.82□□□□□ -1.64
NPHP3-206ENST00000474871 TAS2R42Q7RTR8 314 aa4.82□□□□□ -1.64
NPHP3-206ENST00000474871 NECAB2Q7Z6G3 386 aa4.82□□□□□ -1.64
NPHP3-206ENST00000474871 MREGQ8N565 214 aa4.82□□□□□ -1.64
NPHP3-206ENST00000474871 IL31RAQ8NI17 732 aa4.82□□□□□ -1.64
NPHP3-206ENST00000474871 GRAPLQ8TC17 118 aaPredicted RBP4.82□□□□□ -1.64
NPHP3-206ENST00000474871 GPBAR1Q8TDU6 330 aa4.82□□□□□ -1.64
NPHP3-206ENST00000474871 CMTM5Q96DZ9 223 aa4.82□□□□□ -1.64
NPHP3-206ENST00000474871 ZFYVE21Q9BQ24 234 aa4.82□□□□□ -1.64
NPHP3-206ENST00000474871 ZNF251Q9BRH9 671 aa4.82□□□□□ -1.64
NPHP3-206ENST00000474871 RAB17Q9H0T7 212 aa4.82□□□□□ -1.64
NPHP3-206ENST00000474871 SLA2Q9H6Q3 261 aa4.82□□□□□ -1.64
NPHP3-206ENST00000474871 MINDY3Q9H8M7 445 aa4.82□□□□□ -1.64
NPHP3-206ENST00000474871 NUBP2Q9Y5Y2 271 aa4.82□□□□□ -1.64
NPHP3-206ENST00000474871 TTLL8A6PVC2 850 aa4.82□□□□□ -1.64
NPHP3-206ENST00000474871 FAM86B1E9PN63 330 aa4.82□□□□□ -1.64
NPHP3-206ENST00000474871 CTDNEP1O95476 244 aa4.82□□□□□ -1.64
NPHP3-206ENST00000474871 RAB3DO95716 219 aa4.82□□□□□ -1.64
NPHP3-206ENST00000474871 FAM86B2P0C5J1 330 aa4.82□□□□□ -1.64
NPHP3-206ENST00000474871 USP17L7P0C7H9 530 aa4.82□□□□□ -1.64
NPHP3-206ENST00000474871 AKR1A1P14550 325 aa4.82□□□□□ -1.64
NPHP3-206ENST00000474871 ZNF30P17039 623 aa4.82□□□□□ -1.64
NPHP3-206ENST00000474871 PIK3R1P27986 724 aa4.82□□□□□ -1.64
NPHP3-206ENST00000474871 RBL1P28749 1068 aa4.82□□□□□ -1.64
NPHP3-206ENST00000474871 CDK9P50750 372 aaKnown RBP4.82□□□□□ -1.64
NPHP3-206ENST00000474871 SLC7A9P82251 487 aa4.82□□□□□ -1.64
NPHP3-206ENST00000474871 RASGEF1BQ0VAM2 473 aa4.82□□□□□ -1.64
NPHP3-206ENST00000474871 CALCOCO2Q13137 446 aa4.82□□□□□ -1.64
NPHP3-206ENST00000474871 PIGHQ14442 188 aaPredicted RBP4.82□□□□□ -1.64
NPHP3-206ENST00000474871 SNAPC1Q16533 368 aa4.82□□□□□ -1.64
NPHP3-206ENST00000474871 WASHC2DQ5SRD0 308 aa4.82□□□□□ -1.64
NPHP3-206ENST00000474871 TMIGD1Q6UXZ0 262 aa4.82□□□□□ -1.64
NPHP3-206ENST00000474871 FAM86B1Q8N7N1 296 aa4.82□□□□□ -1.64
NPHP3-206ENST00000474871 ZNF781Q8N8C0 355 aa4.82□□□□□ -1.64
NPHP3-206ENST00000474871 RFKQ969G6 155 aa4.82□□□□□ -1.64
NPHP3-206ENST00000474871 CPNE4Q96A23 557 aaPredicted RBP4.82□□□□□ -1.64
NPHP3-206ENST00000474871 TAAR6Q96RI8 345 aa4.82□□□□□ -1.64
NPHP3-206ENST00000474871 TWNKQ96RR1 684 aa4.82□□□□□ -1.64
NPHP3-206ENST00000474871 IKZF4Q9H2S9 585 aa4.82□□□□□ -1.64
NPHP3-206ENST00000474871 MMP25Q9NPA2 562 aa4.82□□□□□ -1.64
NPHP3-206ENST00000474871 NXF1Q9UBU9 619 aaKnown RBP4.82□□□□□ -1.64
NPHP3-206ENST00000474871 SNX24Q9Y343 169 aa4.82□□□□□ -1.64
NPHP3-206ENST00000474871 MYH7BA7E2Y1 1941 aa4.82□□□□□ -1.64
NPHP3-206ENST00000474871 DHX15O43143 795 aaKnown RBP4.82□□□□□ -1.64
NPHP3-206ENST00000474871 AKR7A2O43488 359 aa4.82□□□□□ -1.64
NPHP3-206ENST00000474871 B4GAT1O43505 415 aa4.82□□□□□ -1.64
NPHP3-206ENST00000474871 UBXN7O94888 489 aa4.82□□□□□ -1.64
NPHP3-206ENST00000474871 MFN2O95140 757 aa4.82□□□□□ -1.64
NPHP3-206ENST00000474871 SPDEFO95238 335 aa4.82□□□□□ -1.64
NPHP3-206ENST00000474871 FCER2P06734 321 aa4.82□□□□□ -1.64
NPHP3-206ENST00000474871 GUSBP08236 651 aa4.82□□□□□ -1.64
NPHP3-206ENST00000474871 CRABP1P29762 137 aa4.82□□□□□ -1.64
NPHP3-206ENST00000474871 SYKP43405 635 aa4.82□□□□□ -1.64
NPHP3-206ENST00000474871 CAPZBP47756 277 aa4.82□□□□□ -1.64
NPHP3-206ENST00000474871 TUBB4BP68371 445 aa4.82□□□□□ -1.64
NPHP3-206ENST00000474871 NCOA4Q13772 614 aa4.82□□□□□ -1.64
NPHP3-206ENST00000474871 C4orf50Q6ZRC1 276 aa4.82□□□□□ -1.64
NPHP3-206ENST00000474871 LHFPL3Q86UP9 236 aa4.82□□□□□ -1.64
NPHP3-206ENST00000474871 TDRPQ86YL5 185 aa4.82□□□□□ -1.64
NPHP3-206ENST00000474871 PDCD6IPQ8WUM4 868 aaKnown RBP4.82□□□□□ -1.64
NPHP3-206ENST00000474871 MYDGFQ969H8 173 aa4.82□□□□□ -1.64
NPHP3-206ENST00000474871 BORCS5Q969J3 196 aa4.82□□□□□ -1.64
NPHP3-206ENST00000474871 ZFYVE19Q96K21 471 aa4.82□□□□□ -1.64
NPHP3-206ENST00000474871 ZNF184Q99676 751 aaPredicted RBP4.82□□□□□ -1.64
NPHP3-206ENST00000474871 C11orf49Q9H6J7 331 aa4.82□□□□□ -1.64
NPHP3-206ENST00000474871 RPL26L1Q9UNX3 145 aaKnown RBP4.82□□□□□ -1.64
NPHP3-206ENST00000474871 KCNK7Q9Y2U2 307 aa4.82□□□□□ -1.64
NPHP3-206ENST00000474871 SBDSQ9Y3A5 250 aaKnown RBP eCLIP4.82□□□□□ -1.64
NPHP3-206ENST00000474871 QSER1Q2KHR3 1735 aa4.81□□□□□ -1.64
NPHP3-206ENST00000474871 KIF13BQ9NQT8 1826 aa4.81□□□□□ -1.64
NPHP3-206ENST00000474871 CCDC88AQ3V6T2 1871 aa4.81□□□□□ -1.64
NPHP3-206ENST00000474871 TRAF5O00463 557 aa4.81□□□□□ -1.64
NPHP3-206ENST00000474871 MAGEB2O15479 319 aa4.81□□□□□ -1.64
NPHP3-206ENST00000474871 DEXIO95424 95 aa4.81□□□□□ -1.64
NPHP3-206ENST00000474871 TUBBP07437 444 aa4.81□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 64.3 ms