RNA–Protein interactions for RNA: ENST00000474384.2

SNRPB-203, Transcript of small nuclear ribonucleoprotein polypeptides B and B1, humanhuman

TSL 5

Gene SNRPB, Length 985 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPB-203ENST00000474384 BIRC8Q96P09 236 aa17.8■□□□□ 0.44
SNRPB-203ENST00000474384 TSPYL1Q9H0U9 437 aa17.8■□□□□ 0.44
SNRPB-203ENST00000474384 VPS37BQ9H9H4 285 aa17.8■□□□□ 0.44
SNRPB-203ENST00000474384 LRRC4CQ9HCJ2 640 aa17.8■□□□□ 0.44
SNRPB-203ENST00000474384 VPS9D1Q9Y2B5 631 aa17.8■□□□□ 0.44
SNRPB-203ENST00000474384 U3KQA8 63 aa17.8■□□□□ 0.44
SNRPB-203ENST00000474384 C17orf113A0A1B0GUU1 675 aa17.79■□□□□ 0.44
SNRPB-203ENST00000474384 SPAARA0A1B0GVQ0 90 aa17.79■□□□□ 0.44
SNRPB-203ENST00000474384 KLHL33A6NCF5 533 aa17.79■□□□□ 0.44
SNRPB-203ENST00000474384 A6NCN8 305 aa17.79■□□□□ 0.44
SNRPB-203ENST00000474384 PCNX2A6NKB5 2137 aa17.79■□□□□ 0.44
SNRPB-203ENST00000474384 PDZK1P1A8MUH7 402 aa17.79■□□□□ 0.44
SNRPB-203ENST00000474384 F8W8V4 182 aa17.79■□□□□ 0.44
SNRPB-203ENST00000474384 KCNK5O95279 499 aa17.79■□□□□ 0.44
SNRPB-203ENST00000474384 TRIM16O95361 564 aa17.79■□□□□ 0.44
SNRPB-203ENST00000474384 GSTA2P09210 222 aa17.79■□□□□ 0.44
SNRPB-203ENST00000474384 CKMT1AP12532 417 aa17.79■□□□□ 0.44
SNRPB-203ENST00000474384 CEACAM1P13688 526 aa17.79■□□□□ 0.44
SNRPB-203ENST00000474384 F3P13726 295 aa17.79■□□□□ 0.44
SNRPB-203ENST00000474384 CKMT2P17540 419 aa17.79■□□□□ 0.44
SNRPB-203ENST00000474384 KYNUQ16719 465 aa17.79■□□□□ 0.44
SNRPB-203ENST00000474384 ZNF658BQ4V348 819 aaPredicted RBP17.79■□□□□ 0.44
SNRPB-203ENST00000474384 C14orf28Q4W4Y0 310 aa17.79■□□□□ 0.44
SNRPB-203ENST00000474384 CTSL3PQ5NE16 218 aa17.79■□□□□ 0.44
SNRPB-203ENST00000474384 IYDQ6PHW0 289 aa17.79■□□□□ 0.44
SNRPB-203ENST00000474384 CNSTQ6PJW8 725 aa17.79■□□□□ 0.44
SNRPB-203ENST00000474384 NAPRTQ6XQN6 538 aa17.79■□□□□ 0.44
SNRPB-203ENST00000474384 HM13Q8TCT9 377 aa17.79■□□□□ 0.44
SNRPB-203ENST00000474384 LKAAEAR1Q8TD35 194 aa17.79■□□□□ 0.44
SNRPB-203ENST00000474384 ELMO1Q92556 727 aa17.79■□□□□ 0.44
SNRPB-203ENST00000474384 ANKZF1Q9H8Y5 726 aa17.79■□□□□ 0.44
SNRPB-203ENST00000474384 NCKIPSDQ9NZQ3 722 aa17.79■□□□□ 0.44
SNRPB-203ENST00000474384 SCHIP1Q9P0W5 487 aaPredicted RBP17.79■□□□□ 0.44
SNRPB-203ENST00000474384 GNPTGQ9UJJ9 305 aa17.79■□□□□ 0.44
SNRPB-203ENST00000474384 PADI4Q9UM07 663 aa17.79■□□□□ 0.44
SNRPB-203ENST00000474384 PSMD13Q9UNM6 376 aa17.79■□□□□ 0.44
SNRPB-203ENST00000474384 WDR37Q9Y2I8 494 aa17.79■□□□□ 0.44
SNRPB-203ENST00000474384 PCDHB1Q9Y5F3 818 aa17.79■□□□□ 0.44
SNRPB-203ENST00000474384 SPTBN4Q9H254 2564 aa17.78■□□□□ 0.44
SNRPB-203ENST00000474384 TCRBV9S1A1TA0A576 114 aa17.78■□□□□ 0.44
SNRPB-203ENST00000474384 CPED1A4D0V7 1026 aa17.78■□□□□ 0.44
SNRPB-203ENST00000474384 PIAS1O75925 651 aa17.78■□□□□ 0.44
SNRPB-203ENST00000474384 AHSGP02765 367 aa17.78■□□□□ 0.44
SNRPB-203ENST00000474384 ESR1P03372 595 aa17.78■□□□□ 0.44
SNRPB-203ENST00000474384 GSTM1P09488 218 aa17.78■□□□□ 0.44
SNRPB-203ENST00000474384 BRAFP15056 766 aa17.78■□□□□ 0.44
SNRPB-203ENST00000474384 KCNA4P22459 653 aa17.78■□□□□ 0.44
SNRPB-203ENST00000474384 GABRB3P28472 473 aa17.78■□□□□ 0.44
SNRPB-203ENST00000474384 LEPRP48357 1165 aaKnown RBP17.78■□□□□ 0.44
SNRPB-203ENST00000474384 RPIAP49247 311 aa17.78■□□□□ 0.44
SNRPB-203ENST00000474384 DUSP3P51452 185 aaPredicted RBP17.78■□□□□ 0.44
SNRPB-203ENST00000474384 ADARP55265 1226 aaKnown RBP17.78■□□□□ 0.44
SNRPB-203ENST00000474384 MAZP56270 477 aaKnown RBP17.78■□□□□ 0.44
SNRPB-203ENST00000474384 TUBB4BP68371 445 aa17.78■□□□□ 0.44
SNRPB-203ENST00000474384 GSTM4Q03013 218 aa17.78■□□□□ 0.44
SNRPB-203ENST00000474384 PUM1Q14671 1186 aaKnown RBP eCLIP17.78■□□□□ 0.444e-12■■□□□ 13.2
SNRPB-203ENST00000474384 BRD3Q15059 726 aa17.78■□□□□ 0.44
SNRPB-203ENST00000474384 ABRAXAS1Q6UWZ7 409 aa17.78■□□□□ 0.44
SNRPB-203ENST00000474384 GLRX5Q86SX6 157 aa17.78■□□□□ 0.44
SNRPB-203ENST00000474384 C17orf82Q86X59 251 aaPredicted RBP17.78■□□□□ 0.44
SNRPB-203ENST00000474384 ARL14Q8N4G2 192 aa17.78■□□□□ 0.44
SNRPB-203ENST00000474384 TSSK1BQ9BXA7 367 aa17.78■□□□□ 0.44
SNRPB-203ENST00000474384 COG4Q9H9E3 785 aa17.78■□□□□ 0.44
SNRPB-203ENST00000474384 SMYD2Q9NRG4 433 aa17.78■□□□□ 0.44
SNRPB-203ENST00000474384 NINJ2Q9NZG7 142 aa17.78■□□□□ 0.44
SNRPB-203ENST00000474384 ZFATQ9P243 1243 aa17.78■□□□□ 0.44
SNRPB-203ENST00000474384 NOL12Q9UGY1 213 aaKnown RBP eCLIP17.78■□□□□ 0.44
SNRPB-203ENST00000474384 ACSL5Q9ULC5 683 aa17.78■□□□□ 0.44
SNRPB-203ENST00000474384 V9GYY5 206 aaPredicted RBP17.78■□□□□ 0.44
SNRPB-203ENST00000474384 GOLGA4Q13439 2230 aaKnown RBP17.78■□□□□ 0.44
SNRPB-203ENST00000474384 NIPSNAP2O75323 286 aa17.77■□□□□ 0.44
SNRPB-203ENST00000474384 PKMP14618 531 aaKnown RBP17.77■□□□□ 0.44
SNRPB-203ENST00000474384 CCR7P32248 378 aa17.77■□□□□ 0.44
SNRPB-203ENST00000474384 ID4P47928 161 aa17.77■□□□□ 0.44
SNRPB-203ENST00000474384 SIM1P81133 766 aaPredicted RBP17.77■□□□□ 0.44
SNRPB-203ENST00000474384 BOP1Q14137 746 aaKnown RBP17.77■□□□□ 0.44
SNRPB-203ENST00000474384 CLCA4Q14CN2 919 aa17.77■□□□□ 0.44
SNRPB-203ENST00000474384 CCDC157Q569K6 752 aa17.77■□□□□ 0.44
SNRPB-203ENST00000474384 AGAP9Q5VTM2 703 aa17.77■□□□□ 0.44
SNRPB-203ENST00000474384 GUSBP11Q6P575 273 aa17.77■□□□□ 0.44
SNRPB-203ENST00000474384 ZNF549Q6P9A3 640 aa17.77■□□□□ 0.44
SNRPB-203ENST00000474384 WASH2PQ6VEQ5 465 aa17.77■□□□□ 0.44
SNRPB-203ENST00000474384 KIAA0408Q6ZU52 694 aa17.77■□□□□ 0.44
SNRPB-203ENST00000474384 CYS1Q717R9 158 aa17.77■□□□□ 0.44
SNRPB-203ENST00000474384 EFL1Q7Z2Z2 1120 aaKnown RBP17.77■□□□□ 0.44
SNRPB-203ENST00000474384 RELL1Q8IUW5 271 aa17.77■□□□□ 0.44
SNRPB-203ENST00000474384 GSPT2Q8IYD1 628 aaKnown RBP17.77■□□□□ 0.44
SNRPB-203ENST00000474384 SFRP1Q8N474 314 aa17.77■□□□□ 0.44
SNRPB-203ENST00000474384 MAPK15Q8TD08 544 aa17.77■□□□□ 0.44
SNRPB-203ENST00000474384 SLC37A2Q8TED4 501 aa17.77■□□□□ 0.44
SNRPB-203ENST00000474384 FAM136AQ96C01 138 aa17.77■□□□□ 0.44
SNRPB-203ENST00000474384 WWP1Q9H0M0 922 aa17.77■□□□□ 0.44
SNRPB-203ENST00000474384 WASH6PQ9NQA3 447 aa17.77■□□□□ 0.44
SNRPB-203ENST00000474384 EVA1BQ9NVM1 165 aa17.77■□□□□ 0.44
SNRPB-203ENST00000474384 EME2A4GXA9 379 aaPredicted RBP17.76■□□□□ 0.43
SNRPB-203ENST00000474384 OR5K4A6NMS3 321 aa17.76■□□□□ 0.43
SNRPB-203ENST00000474384 OR52A4PA6NMU1 304 aa17.76■□□□□ 0.43
SNRPB-203ENST00000474384 CXorf49A8MYA2 514 aaPredicted RBP17.76■□□□□ 0.43
SNRPB-203ENST00000474384 H3BMM5 538 aa17.76■□□□□ 0.43
SNRPB-203ENST00000474384 LIN7AO14910 233 aaPredicted RBP17.76■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms