RNA–Protein interactions for RNA: ENST00000473924.1

DDX56-209, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 385 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-209ENST00000473924 CNOT1A5YKK6 2376 aaKnown RBP12.18□□□□□ -0.46
DDX56-209ENST00000473924 C17orf113A0A1B0GUU1 675 aa12.18□□□□□ -0.46
DDX56-209ENST00000473924 E7ESA3 106 aa12.18□□□□□ -0.46
DDX56-209ENST00000473924 EIF3HO15372 352 aaKnown RBP eCLIP12.18□□□□□ -0.46
DDX56-209ENST00000473924 ZW10O43264 779 aa12.18□□□□□ -0.46
DDX56-209ENST00000473924 SLC35G4P0C7Q5 338 aa12.18□□□□□ -0.46
DDX56-209ENST00000473924 ERVK-10P10266 1014 aa12.18□□□□□ -0.46
DDX56-209ENST00000473924 ITGB6P18564 788 aa12.18□□□□□ -0.46
DDX56-209ENST00000473924 DEKP35659 375 aaKnown RBP12.18□□□□□ -0.46
DDX56-209ENST00000473924 PPM1FP49593 454 aaPredicted RBP12.18□□□□□ -0.46
DDX56-209ENST00000473924 HHEXQ03014 270 aa12.18□□□□□ -0.46
DDX56-209ENST00000473924 FOXC1Q12948 553 aa12.18□□□□□ -0.46
DDX56-209ENST00000473924 CTBP1Q13363 440 aa12.18□□□□□ -0.46
DDX56-209ENST00000473924 FASTKD3Q14CZ7 662 aaKnown RBP12.18□□□□□ -0.46
DDX56-209ENST00000473924 TYSND1Q2T9J0 566 aa12.18□□□□□ -0.46
DDX56-209ENST00000473924 SYTL3Q4VX76 610 aa12.18□□□□□ -0.46
DDX56-209ENST00000473924 HSP90AA5PQ58FG0 334 aa12.18□□□□□ -0.46
DDX56-209ENST00000473924 PERM1Q5SV97 790 aa12.18□□□□□ -0.46
DDX56-209ENST00000473924 AGAP9Q5VTM2 703 aa12.18□□□□□ -0.46
DDX56-209ENST00000473924 METRNLQ641Q3 311 aa12.18□□□□□ -0.46
DDX56-209ENST00000473924 ABRAXAS1Q6UWZ7 409 aa12.18□□□□□ -0.46
DDX56-209ENST00000473924 WASH2PQ6VEQ5 465 aa12.18□□□□□ -0.46
DDX56-209ENST00000473924 UNC5AQ6ZN44 842 aa12.18□□□□□ -0.46
DDX56-209ENST00000473924 FAM83HQ6ZRV2 1179 aaPredicted RBP12.18□□□□□ -0.46
DDX56-209ENST00000473924 ERMP1Q7Z2K6 904 aa12.18□□□□□ -0.46
DDX56-209ENST00000473924 LRRC6Q86X45 466 aa12.18□□□□□ -0.46
DDX56-209ENST00000473924 C17orf82Q86X59 251 aaPredicted RBP12.18□□□□□ -0.46
DDX56-209ENST00000473924 CILP2Q8IUL8 1156 aa12.18□□□□□ -0.46
DDX56-209ENST00000473924 DENND6AQ8IWF6 608 aa12.18□□□□□ -0.46
DDX56-209ENST00000473924 PALM2Q8IXS6 379 aa12.18□□□□□ -0.46
DDX56-209ENST00000473924 UNC5BQ8IZJ1 945 aa12.18□□□□□ -0.46
DDX56-209ENST00000473924 SFRP1Q8N474 314 aa12.18□□□□□ -0.46
DDX56-209ENST00000473924 Q8N9G6 341 aaPredicted RBP12.18□□□□□ -0.46
DDX56-209ENST00000473924 AVL9Q8NBF6 648 aa12.18□□□□□ -0.46
DDX56-209ENST00000473924 ADAMTS14Q8WXS8 1223 aa12.18□□□□□ -0.46
DDX56-209ENST00000473924 IFT81Q8WYA0 676 aa12.18□□□□□ -0.46
DDX56-209ENST00000473924 ELMO1Q92556 727 aa12.18□□□□□ -0.46
DDX56-209ENST00000473924 CXorf40BQ96DE9 158 aa12.18□□□□□ -0.46
DDX56-209ENST00000473924 CERS2Q96G23 380 aa12.18□□□□□ -0.46
DDX56-209ENST00000473924 WASH6PQ9NQA3 447 aa12.18□□□□□ -0.46
DDX56-209ENST00000473924 IARS2Q9NSE4 1012 aaKnown RBP12.18□□□□□ -0.46
DDX56-209ENST00000473924 INTS10Q9NVR2 710 aaKnown RBP12.18□□□□□ -0.46
DDX56-209ENST00000473924 DMGDHQ9UI17 866 aaKnown RBP12.18□□□□□ -0.46
DDX56-209ENST00000473924 GNPTGQ9UJJ9 305 aa12.18□□□□□ -0.46
DDX56-209ENST00000473924 CRYL1Q9Y2S2 319 aa12.18□□□□□ -0.46
DDX56-209ENST00000473924 ARHGEF17Q96PE2 2063 aaPredicted RBP12.18□□□□□ -0.46
DDX56-209ENST00000473924 GOLGA4Q13439 2230 aaKnown RBP12.17□□□□□ -0.46
DDX56-209ENST00000473924 A6NCN8 305 aa12.17□□□□□ -0.46
DDX56-209ENST00000473924 PRR19A6NJB7 356 aa12.17□□□□□ -0.46
DDX56-209ENST00000473924 OPA1O60313 960 aa12.17□□□□□ -0.46
DDX56-209ENST00000473924 VIPP01282 170 aa12.17□□□□□ -0.46
DDX56-209ENST00000473924 PNLIPP16233 465 aa12.17□□□□□ -0.46
DDX56-209ENST00000473924 ALDH4A1P30038 563 aa12.17□□□□□ -0.46
DDX56-209ENST00000473924 FMO4P31512 558 aa12.17□□□□□ -0.46
DDX56-209ENST00000473924 SLC1A2P43004 574 aa12.17□□□□□ -0.46
DDX56-209ENST00000473924 BOP1Q14137 746 aaKnown RBP12.17□□□□□ -0.46
DDX56-209ENST00000473924 BRD3Q15059 726 aa12.17□□□□□ -0.46
DDX56-209ENST00000473924 ZDHHC24Q6UX98 284 aa12.17□□□□□ -0.46
DDX56-209ENST00000473924 CAPN12Q6ZSI9 719 aa12.17□□□□□ -0.46
DDX56-209ENST00000473924 CHCHD4Q8N4Q1 142 aa12.17□□□□□ -0.46
DDX56-209ENST00000473924 SEC14L1Q92503 715 aa12.17□□□□□ -0.46
DDX56-209ENST00000473924 SH3KBP1Q96B97 665 aa12.17□□□□□ -0.46
DDX56-209ENST00000473924 PANX3Q96QZ0 392 aa12.17□□□□□ -0.46
DDX56-209ENST00000473924 SLC38A3Q99624 504 aa12.17□□□□□ -0.46
DDX56-209ENST00000473924 FOXP3Q9BZS1 431 aa12.17□□□□□ -0.46
DDX56-209ENST00000473924 WWP1Q9H0M0 922 aa12.17□□□□□ -0.46
DDX56-209ENST00000473924 P2RY12Q9H244 342 aa12.17□□□□□ -0.46
DDX56-209ENST00000473924 CCDC68Q9H2F9 335 aa12.17□□□□□ -0.46
DDX56-209ENST00000473924 COG4Q9H9E3 785 aa12.17□□□□□ -0.46
DDX56-209ENST00000473924 L2HGDHQ9H9P8 463 aa12.17□□□□□ -0.46
DDX56-209ENST00000473924 SARS2Q9NP81 518 aaKnown RBP12.17□□□□□ -0.46
DDX56-209ENST00000473924 FBXO6Q9NRD1 293 aaPredicted RBP12.17□□□□□ -0.46
DDX56-209ENST00000473924 SCHIP1Q9P0W5 487 aaPredicted RBP12.17□□□□□ -0.46
DDX56-209ENST00000473924 CPNE7Q9UBL6 633 aa12.17□□□□□ -0.46
DDX56-209ENST00000473924 MTRF1LQ9UGC7 380 aaKnown RBP12.17□□□□□ -0.46
DDX56-209ENST00000473924 FBXO5Q9UKT4 447 aa12.17□□□□□ -0.46
DDX56-209ENST00000473924 WDR37Q9Y2I8 494 aa12.17□□□□□ -0.46
DDX56-209ENST00000473924 PCDHB1Q9Y5F3 818 aa12.17□□□□□ -0.46
DDX56-209ENST00000473924 OR52A4PA6NMU1 304 aa12.16□□□□□ -0.46
DDX56-209ENST00000473924 IQCF5A8MTL0 148 aa12.16□□□□□ -0.46
DDX56-209ENST00000473924 E5RI56 91 aa12.16□□□□□ -0.46
DDX56-209ENST00000473924 H3BMM5 538 aa12.16□□□□□ -0.46
DDX56-209ENST00000473924 IFRD1O00458 451 aaPredicted RBP12.16□□□□□ -0.46
DDX56-209ENST00000473924 LIN7AO14910 233 aaPredicted RBP12.16□□□□□ -0.46
DDX56-209ENST00000473924 PPM1DO15297 605 aa12.16□□□□□ -0.46
DDX56-209ENST00000473924 DKK1O94907 266 aa12.16□□□□□ -0.46
DDX56-209ENST00000473924 RPLP0P05388 317 aaKnown RBP12.16□□□□□ -0.46
DDX56-209ENST00000473924 RHOXF2BP0C7M4 288 aa12.16□□□□□ -0.46
DDX56-209ENST00000473924 BRAFP15056 766 aa12.16□□□□□ -0.46
DDX56-209ENST00000473924 XRCC1P18887 633 aaPredicted RBP12.16□□□□□ -0.46
DDX56-209ENST00000473924 RPS3P23396 243 aaKnown RBP eCLIP12.16□□□□□ -0.46
DDX56-209ENST00000473924 FASLGP48023 281 aa12.16□□□□□ -0.46
DDX56-209ENST00000473924 CARSP49589 748 aaKnown RBP12.16□□□□□ -0.46
DDX56-209ENST00000473924 RPA4Q13156 261 aa12.16□□□□□ -0.46
DDX56-209ENST00000473924 CBLBQ13191 982 aa12.16□□□□□ -0.46
DDX56-209ENST00000473924 KRT33BQ14525 404 aa12.16□□□□□ -0.46
DDX56-209ENST00000473924 CLCA4Q14CN2 919 aa12.16□□□□□ -0.46
DDX56-209ENST00000473924 TMED2Q15363 201 aa12.16□□□□□ -0.46
DDX56-209ENST00000473924 STEAP4Q687X5 459 aa12.16□□□□□ -0.46
DDX56-209ENST00000473924 CEP128Q6ZU80 1094 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms