RNA–Protein interactions for RNA: ENST00000473633.1

AGAP3-212, Transcript of ArfGAP with GTPase domain, ankyrin repeat and PH domain 3, humanhuman

TSL 1 (best)

Gene AGAP3, Length 3,751 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AGAP3-212ENST00000473633 I6L893 689 aaPredicted RBP9.39□□□□□ -0.91
AGAP3-212ENST00000473633 AGRPO00253 132 aa9.39□□□□□ -0.91
AGAP3-212ENST00000473633 SOCS2O14508 198 aa9.39□□□□□ -0.91
AGAP3-212ENST00000473633 SULT1C4O75897 302 aa9.39□□□□□ -0.91
AGAP3-212ENST00000473633 CNTN5O94779 1100 aa9.39□□□□□ -0.91
AGAP3-212ENST00000473633 GLUD2P49448 558 aa9.39□□□□□ -0.91
AGAP3-212ENST00000473633 CLLU1OSQ5K130 101 aa9.39□□□□□ -0.91
AGAP3-212ENST00000473633 DENND5AQ6IQ26 1287 aa9.39□□□□□ -0.91
AGAP3-212ENST00000473633 PIWIL4Q7Z3Z4 852 aaKnown RBP9.39□□□□□ -0.91
AGAP3-212ENST00000473633 TMEM102Q8N9M5 508 aaPredicted RBP9.39□□□□□ -0.91
AGAP3-212ENST00000473633 TXNDC5Q8NBS9 432 aaKnown RBP9.39□□□□□ -0.91
AGAP3-212ENST00000473633 KLHDC9Q8NEP7 349 aa9.39□□□□□ -0.91
AGAP3-212ENST00000473633 ZMIZ2Q8NF64 920 aa9.39□□□□□ -0.91
AGAP3-212ENST00000473633 RDH11Q8TC12 318 aa9.39□□□□□ -0.91
AGAP3-212ENST00000473633 C12orf4Q9NQ89 552 aa9.39□□□□□ -0.91
AGAP3-212ENST00000473633 OLA1Q9NTK5 396 aaKnown RBP9.39□□□□□ -0.91
AGAP3-212ENST00000473633 CDH9Q9ULB4 789 aa9.39□□□□□ -0.91
AGAP3-212ENST00000473633 ANKRD6Q9Y2G4 727 aa9.39□□□□□ -0.91
AGAP3-212ENST00000473633 PKP3Q9Y446 797 aa9.39□□□□□ -0.91
AGAP3-212ENST00000473633 COPG1Q9Y678 874 aaKnown RBP9.39□□□□□ -0.91
AGAP3-212ENST00000473633 PMF1-BGLAPU3KQ54 211 aa9.39□□□□□ -0.91
AGAP3-212ENST00000473633 STX7O15400 261 aaKnown RBP9.38□□□□□ -0.91
AGAP3-212ENST00000473633 RAMP2O60895 175 aa9.38□□□□□ -0.91
AGAP3-212ENST00000473633 TSC22D2O75157 780 aa9.38□□□□□ -0.91
AGAP3-212ENST00000473633 RBP1P09455 135 aa9.38□□□□□ -0.91
AGAP3-212ENST00000473633 THRBP10828 461 aa9.38□□□□□ -0.91
AGAP3-212ENST00000473633 DDX39BQ13838 428 aaKnown RBP9.38□□□□□ -0.91
AGAP3-212ENST00000473633 OXA1LQ15070 435 aa9.38□□□□□ -0.91
AGAP3-212ENST00000473633 USP41Q3LFD5 358 aa9.38□□□□□ -0.91
AGAP3-212ENST00000473633 UBE2UQ5VVX9 321 aa9.38□□□□□ -0.91
AGAP3-212ENST00000473633 ELMSAN1Q6PJG2 1045 aa9.38□□□□□ -0.91
AGAP3-212ENST00000473633 VASH1Q7L8A9 365 aaPredicted RBP9.38□□□□□ -0.91
AGAP3-212ENST00000473633 CUZD1Q86UP6 607 aa9.38□□□□□ -0.91
AGAP3-212ENST00000473633 DCP2Q8IU60 420 aaKnown RBP9.38□□□□□ -0.91
AGAP3-212ENST00000473633 ANKFN1Q8N957 763 aa9.38□□□□□ -0.91
AGAP3-212ENST00000473633 GOLM1Q8NBJ4 401 aa9.38□□□□□ -0.91
AGAP3-212ENST00000473633 FAM162AQ96A26 154 aa9.38□□□□□ -0.91
AGAP3-212ENST00000473633 HMCESQ96FZ2 354 aa9.38□□□□□ -0.91
AGAP3-212ENST00000473633 KCNA7Q96RP8 456 aa9.38□□□□□ -0.91
AGAP3-212ENST00000473633 TMEM246Q9BRR3 403 aa9.38□□□□□ -0.91
AGAP3-212ENST00000473633 GMIPQ9P107 970 aa9.38□□□□□ -0.91
AGAP3-212ENST00000473633 GMPR2Q9P2T1 348 aaKnown RBP9.38□□□□□ -0.91
AGAP3-212ENST00000473633 PNMA8BQ9ULN7 279 aaPredicted RBP9.38□□□□□ -0.91
AGAP3-212ENST00000473633 ZCWPW2A0A1B0GU75 182 aa9.38□□□□□ -0.91
AGAP3-212ENST00000473633 H0Y858 1186 aa9.38□□□□□ -0.91
AGAP3-212ENST00000473633 DCLK1O15075 740 aa9.38□□□□□ -0.91
AGAP3-212ENST00000473633 PSMD3O43242 534 aa9.38□□□□□ -0.91
AGAP3-212ENST00000473633 HS6ST1O60243 411 aa9.38□□□□□ -0.91
AGAP3-212ENST00000473633 SH3BGRLO75368 114 aa9.38□□□□□ -0.91
AGAP3-212ENST00000473633 RSL1D1O76021 490 aaKnown RBP9.38□□□□□ -0.91
AGAP3-212ENST00000473633 PGFP49763 221 aa9.38□□□□□ -0.91
AGAP3-212ENST00000473633 RUNX1T1Q06455 604 aa9.38□□□□□ -0.91
AGAP3-212ENST00000473633 SLC13A2Q13183 592 aa9.38□□□□□ -0.91
AGAP3-212ENST00000473633 NR6A1Q15406 480 aa9.38□□□□□ -0.91
AGAP3-212ENST00000473633 BCL2A1Q16548 175 aa9.38□□□□□ -0.91
AGAP3-212ENST00000473633 ATP6AP1LQ52LC2 224 aa9.38□□□□□ -0.91
AGAP3-212ENST00000473633 SMUG1Q53HV7 270 aa9.38□□□□□ -0.91
AGAP3-212ENST00000473633 MRNIPQ6NTE8 343 aa9.38□□□□□ -0.91
AGAP3-212ENST00000473633 MILR1Q7Z6M3 343 aa9.38□□□□□ -0.91
AGAP3-212ENST00000473633 SCML4Q8N228 414 aa9.38□□□□□ -0.91
AGAP3-212ENST00000473633 SETD9Q8NE22 299 aa9.38□□□□□ -0.91
AGAP3-212ENST00000473633 LPCAT1Q8NF37 534 aa9.38□□□□□ -0.91
AGAP3-212ENST00000473633 OR13C4Q8NGS5 318 aa9.38□□□□□ -0.91
AGAP3-212ENST00000473633 UBASH3BQ8TF42 649 aa9.38□□□□□ -0.91
AGAP3-212ENST00000473633 SMIM14Q96QK8 99 aa9.38□□□□□ -0.91
AGAP3-212ENST00000473633 YME1L1Q96TA2 773 aa9.38□□□□□ -0.91
AGAP3-212ENST00000473633 HOPXQ9BPY8 73 aaPredicted RBP9.38□□□□□ -0.91
AGAP3-212ENST00000473633 MUC3BQ9H195 1237 aa9.38□□□□□ -0.91
AGAP3-212ENST00000473633 MTPAPQ9NVV4 582 aaKnown RBP eCLIP9.38□□□□□ -0.915e-6■■□□□ 12
AGAP3-212ENST00000473633 LOC285556D6RIA3 1793 aa9.38□□□□□ -0.91
AGAP3-212ENST00000473633 MAGEB16A2A368 324 aa9.38□□□□□ -0.91
AGAP3-212ENST00000473633 E9PAM4 449 aa9.38□□□□□ -0.91
AGAP3-212ENST00000473633 NBNO60934 754 aa9.38□□□□□ -0.91
AGAP3-212ENST00000473633 PRKD3O94806 890 aa9.38□□□□□ -0.91
AGAP3-212ENST00000473633 MBL2P11226 248 aaPredicted RBP9.38□□□□□ -0.91
AGAP3-212ENST00000473633 WARSP23381 471 aaKnown RBP9.38□□□□□ -0.91
AGAP3-212ENST00000473633 OR2B6P58173 313 aa9.38□□□□□ -0.91
AGAP3-212ENST00000473633 SKIV2LQ15477 1246 aaKnown RBP9.38□□□□□ -0.91
AGAP3-212ENST00000473633 VPS26BQ4G0F5 336 aa9.38□□□□□ -0.91
AGAP3-212ENST00000473633 INTS6LQ5JSJ4 861 aaKnown RBP9.38□□□□□ -0.91
AGAP3-212ENST00000473633 VARS2Q5ST30 1063 aaKnown RBP9.38□□□□□ -0.91
AGAP3-212ENST00000473633 DDX59Q5T1V6 619 aaKnown RBP eCLIP9.38□□□□□ -0.91
AGAP3-212ENST00000473633 DCLRE1AQ6PJP8 1040 aa9.38□□□□□ -0.91
AGAP3-212ENST00000473633 LINGO4Q6UY18 593 aa9.38□□□□□ -0.91
AGAP3-212ENST00000473633 TMEM173Q86WV6 379 aaPredicted RBP9.38□□□□□ -0.91
AGAP3-212ENST00000473633 LGI2Q8N0V4 545 aa9.38□□□□□ -0.91
AGAP3-212ENST00000473633 TMEM86AQ8N2M4 240 aa9.38□□□□□ -0.91
AGAP3-212ENST00000473633 Q8N9G6 341 aaPredicted RBP9.38□□□□□ -0.91
AGAP3-212ENST00000473633 RTP4Q96DX8 246 aa9.38□□□□□ -0.91
AGAP3-212ENST00000473633 CDK5RAP1Q96SZ6 601 aaKnown RBP9.38□□□□□ -0.91
AGAP3-212ENST00000473633 SLX1AQ9BQ83 275 aa9.38□□□□□ -0.91
AGAP3-212ENST00000473633 ZNF717Q9BY31 904 aaPredicted RBP9.38□□□□□ -0.91
AGAP3-212ENST00000473633 EXOSC4Q9NPD3 245 aaKnown RBP9.38□□□□□ -0.91
AGAP3-212ENST00000473633 OXSMQ9NWU1 459 aa9.38□□□□□ -0.91
AGAP3-212ENST00000473633 C3orf18Q9UK00 162 aa9.38□□□□□ -0.91
AGAP3-212ENST00000473633 ARL5AQ9Y689 179 aa9.38□□□□□ -0.91
AGAP3-212ENST00000473633 ISPDA4D126 451 aa9.37□□□□□ -0.91
AGAP3-212ENST00000473633 KRT87PA6NCN2 255 aa9.37□□□□□ -0.91
AGAP3-212ENST00000473633 UBXN8O00124 270 aa9.37□□□□□ -0.91
AGAP3-212ENST00000473633 SEMA3DO95025 777 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms