RNA–Protein interactions for RNA: ENST00000473421.1

TRAF4-209, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 585 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-209ENST00000473421 AGAP3Q96P47 875 aa12.31□□□□□ -0.44
TRAF4-209ENST00000473421 INSM2Q96T92 566 aaPredicted RBP12.31□□□□□ -0.44
TRAF4-209ENST00000473421 ADGRE3Q9BY15 652 aa12.31□□□□□ -0.44
TRAF4-209ENST00000473421 GPR63Q9BZJ6 419 aa12.31□□□□□ -0.44
TRAF4-209ENST00000473421 IL26Q9NPH9 171 aa12.31□□□□□ -0.44
TRAF4-209ENST00000473421 KCND1Q9NSA2 647 aa12.31□□□□□ -0.44
TRAF4-209ENST00000473421 HRASLS2Q9NWW9 162 aa12.31□□□□□ -0.44
TRAF4-209ENST00000473421 UBP1Q9NZI7 540 aa12.31□□□□□ -0.44
TRAF4-209ENST00000473421 CHMP5Q9NZZ3 219 aa12.31□□□□□ -0.44
TRAF4-209ENST00000473421 NFKBIL1Q9UBC1 381 aaPredicted RBP12.31□□□□□ -0.44
TRAF4-209ENST00000473421 IP6K2Q9UHH9 426 aa12.31□□□□□ -0.44
TRAF4-209ENST00000473421 SRPK3Q9UPE1 567 aa12.31□□□□□ -0.44
TRAF4-209ENST00000473421 FBN2P35556 2912 aa12.31□□□□□ -0.44
TRAF4-209ENST00000473421 OTOGQ6ZRI0 2925 aa12.31□□□□□ -0.44
TRAF4-209ENST00000473421 A0A087X0T9 212 aa12.3□□□□□ -0.44
TRAF4-209ENST00000473421 OR6C74A6NCV1 312 aa12.3□□□□□ -0.44
TRAF4-209ENST00000473421 OR5K3A6NET4 321 aa12.3□□□□□ -0.44
TRAF4-209ENST00000473421 TLCD2A6NGC4 264 aa12.3□□□□□ -0.44
TRAF4-209ENST00000473421 SLC9B1P1A6NJY1 282 aa12.3□□□□□ -0.44
TRAF4-209ENST00000473421 OR2AG2A6NM03 316 aa12.3□□□□□ -0.44
TRAF4-209ENST00000473421 DPM1O60762 260 aa12.3□□□□□ -0.44
TRAF4-209ENST00000473421 FAM228BP0C875 321 aa12.3□□□□□ -0.44
TRAF4-209ENST00000473421 ATXN8OSP0DMR3 200 aa12.3□□□□□ -0.44
TRAF4-209ENST00000473421 CA4P22748 312 aa12.3□□□□□ -0.44
TRAF4-209ENST00000473421 TNFRSF8P28908 595 aa12.3□□□□□ -0.44
TRAF4-209ENST00000473421 PBLDP30039 288 aaPredicted RBP12.3□□□□□ -0.44
TRAF4-209ENST00000473421 CHRNA4P43681 627 aa12.3□□□□□ -0.44
TRAF4-209ENST00000473421 TUBB4BP68371 445 aa12.3□□□□□ -0.44
TRAF4-209ENST00000473421 IFI35P80217 286 aaPredicted RBP12.3□□□□□ -0.44
TRAF4-209ENST00000473421 ACY1Q03154 408 aa12.3□□□□□ -0.44
TRAF4-209ENST00000473421 PPIDQ08752 370 aaKnown RBP12.3□□□□□ -0.44
TRAF4-209ENST00000473421 TUBB2AQ13885 445 aa12.3□□□□□ -0.44
TRAF4-209ENST00000473421 SPOCD1Q6ZMY3 1216 aa12.3□□□□□ -0.44
TRAF4-209ENST00000473421 RBM12BQ8IXT5 1001 aaKnown RBP12.3□□□□□ -0.44
TRAF4-209ENST00000473421 OR1L3Q8NH93 324 aa12.3□□□□□ -0.44
TRAF4-209ENST00000473421 TRIM11Q96F44 468 aa12.3□□□□□ -0.44
TRAF4-209ENST00000473421 VPS35Q96QK1 796 aa12.3□□□□□ -0.44
TRAF4-209ENST00000473421 SMAD5Q99717 465 aaKnown RBP12.3□□□□□ -0.44
TRAF4-209ENST00000473421 ZNF670Q9BS34 389 aa12.3□□□□□ -0.44
TRAF4-209ENST00000473421 TUBB2BQ9BVA1 445 aa12.3□□□□□ -0.44
TRAF4-209ENST00000473421 IMP3Q9NV31 184 aaKnown RBP12.3□□□□□ -0.44
TRAF4-209ENST00000473421 PCMTD2Q9NV79 361 aa12.3□□□□□ -0.44
TRAF4-209ENST00000473421 SNX7Q9UNH6 387 aa12.3□□□□□ -0.44
TRAF4-209ENST00000473421 CSAG2Q9Y5P2 127 aa12.3□□□□□ -0.44
TRAF4-209ENST00000473421 POLEQ07864 2286 aa12.3□□□□□ -0.44
TRAF4-209ENST00000473421 CSMD2Q7Z408 3487 aa12.3□□□□□ -0.44
TRAF4-209ENST00000473421 DIDO1Q9BTC0 2240 aaKnown RBP12.29□□□□□ -0.44
TRAF4-209ENST00000473421 SSU72P8A0A1W2PR75 194 aa12.29□□□□□ -0.44
TRAF4-209ENST00000473421 UBA6A0AVT1 1052 aaPredicted RBP12.29□□□□□ -0.44
TRAF4-209ENST00000473421 HCRTR1O43613 425 aa12.29□□□□□ -0.44
TRAF4-209ENST00000473421 PMPCBO75439 489 aa12.29□□□□□ -0.44
TRAF4-209ENST00000473421 CTSBP07858 339 aa12.29□□□□□ -0.44
TRAF4-209ENST00000473421 MTHFD1P11586 935 aaKnown RBP12.29□□□□□ -0.44
TRAF4-209ENST00000473421 ARL4DP49703 201 aa12.29□□□□□ -0.44
TRAF4-209ENST00000473421 VAV2P52735 878 aa12.29□□□□□ -0.44
TRAF4-209ENST00000473421 CDK18Q07002 472 aa12.29□□□□□ -0.44
TRAF4-209ENST00000473421 DMPKQ09013 629 aa12.29□□□□□ -0.44
TRAF4-209ENST00000473421 PLCL1Q15111 1095 aa12.29□□□□□ -0.44
TRAF4-209ENST00000473421 PDPK2PQ6A1A2 396 aa12.29□□□□□ -0.44
TRAF4-209ENST00000473421 TMEM220Q6QAJ8 160 aa12.29□□□□□ -0.44
TRAF4-209ENST00000473421 AMZ2Q86W34 360 aa12.29□□□□□ -0.44
TRAF4-209ENST00000473421 RHOT1Q8IXI2 618 aa12.29□□□□□ -0.44
TRAF4-209ENST00000473421 GLIS1Q8NBF1 620 aa12.29□□□□□ -0.44
TRAF4-209ENST00000473421 GDAP1Q8TB36 358 aa12.29□□□□□ -0.44
TRAF4-209ENST00000473421 NLNQ9BYT8 704 aa12.29□□□□□ -0.44
TRAF4-209ENST00000473421 KLHL25Q9H0H3 589 aa12.29□□□□□ -0.44
TRAF4-209ENST00000473421 WWP1Q9H0M0 922 aa12.29□□□□□ -0.44
TRAF4-209ENST00000473421 ANO10Q9NW15 660 aa12.29□□□□□ -0.44
TRAF4-209ENST00000473421 GPR83Q9NYM4 423 aa12.29□□□□□ -0.44
TRAF4-209ENST00000473421 FAM8A1Q9UBU6 413 aa12.29□□□□□ -0.44
TRAF4-209ENST00000473421 SLC24A2Q9UI40 661 aa12.29□□□□□ -0.44
TRAF4-209ENST00000473421 HEY1Q9Y5J3 304 aa12.29□□□□□ -0.44
TRAF4-209ENST00000473421 APCP25054 2843 aa12.29□□□□□ -0.44
TRAF4-209ENST00000473421 PDZD2O15018 2839 aa12.28□□□□□ -0.44
TRAF4-209ENST00000473421 C3orf70A6NLC5 250 aaPredicted RBP12.28□□□□□ -0.44
TRAF4-209ENST00000473421 MYO1FO00160 1098 aa12.28□□□□□ -0.44
TRAF4-209ENST00000473421 SGTAO43765 313 aa12.28□□□□□ -0.44
TRAF4-209ENST00000473421 KLF7O75840 302 aaPredicted RBP12.28□□□□□ -0.44
TRAF4-209ENST00000473421 RAB40ALP0C0E4 278 aa12.28□□□□□ -0.44
TRAF4-209ENST00000473421 PVRP15151 417 aa12.28□□□□□ -0.44
TRAF4-209ENST00000473421 POLR2CP19387 275 aaPredicted RBP12.28□□□□□ -0.44
TRAF4-209ENST00000473421 CD68P34810 354 aaPredicted RBP12.28□□□□□ -0.44
TRAF4-209ENST00000473421 HALP42357 657 aa12.28□□□□□ -0.44
TRAF4-209ENST00000473421 PDE1BQ01064 536 aa12.28□□□□□ -0.44
TRAF4-209ENST00000473421 AP1B1Q10567 949 aa12.28□□□□□ -0.44
TRAF4-209ENST00000473421 STX1AQ16623 288 aa12.28□□□□□ -0.44
TRAF4-209ENST00000473421 METRNLQ641Q3 311 aa12.28□□□□□ -0.44
TRAF4-209ENST00000473421 FAM151BQ6UXP7 276 aa12.28□□□□□ -0.44
TRAF4-209ENST00000473421 DET1Q7L5Y6 550 aa12.28□□□□□ -0.44
TRAF4-209ENST00000473421 NT5DC3Q86UY8 548 aa12.28□□□□□ -0.44
TRAF4-209ENST00000473421 BPHLQ86WA6 291 aaPredicted RBP12.28□□□□□ -0.44
TRAF4-209ENST00000473421 KMT5CQ86Y97 462 aa12.28□□□□□ -0.44
TRAF4-209ENST00000473421 SYTL1Q8IYJ3 562 aa12.28□□□□□ -0.44
TRAF4-209ENST00000473421 SEC14L1Q92503 715 aa12.28□□□□□ -0.44
TRAF4-209ENST00000473421 LRFN5Q96NI6 719 aa12.28□□□□□ -0.44
TRAF4-209ENST00000473421 RNF157Q96PX1 679 aa12.28□□□□□ -0.44
TRAF4-209ENST00000473421 BARD1Q99728 777 aaKnown RBP12.28□□□□□ -0.44
TRAF4-209ENST00000473421 SLC5A6Q9Y289 635 aa12.28□□□□□ -0.44
TRAF4-209ENST00000473421 BTRCQ9Y297 605 aa12.28□□□□□ -0.44
TRAF4-209ENST00000473421 ANKUB1A6NFN9 424 aa12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms