RNA–Protein interactions for RNA: ENST00000471658.5

PSPC1-203, Transcript of paraspeckle component 1, humanhuman

TSL 1 (best)

Gene PSPC1, Length 1,647 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-203ENST00000471658 AGBL2Q5U5Z8 902 aa18.86■□□□□ 0.61
PSPC1-203ENST00000471658 OTOAQ7RTW8 1153 aa18.86■□□□□ 0.61
PSPC1-203ENST00000471658 VRK3Q8IV63 474 aa18.86■□□□□ 0.61
PSPC1-203ENST00000471658 CFAP206Q8IYR0 622 aa18.86■□□□□ 0.61
PSPC1-203ENST00000471658 PLD6Q8N2A8 252 aaKnown RBP18.86■□□□□ 0.61
PSPC1-203ENST00000471658 ZBTB2Q8N680 514 aa18.86■□□□□ 0.61
PSPC1-203ENST00000471658 GOLGA6L1Q8N7Z2 621 aa18.86■□□□□ 0.61
PSPC1-203ENST00000471658 PRSS33Q8NF86 280 aa18.86■□□□□ 0.61
PSPC1-203ENST00000471658 INPP5DQ92835 1189 aa18.86■□□□□ 0.61
PSPC1-203ENST00000471658 LINC00615Q96LM1 132 aaPredicted RBP18.86■□□□□ 0.61
PSPC1-203ENST00000471658 SLC13A1Q9BZW2 595 aa18.86■□□□□ 0.61
PSPC1-203ENST00000471658 RMI1Q9H9A7 625 aa18.86■□□□□ 0.61
PSPC1-203ENST00000471658 FSCN3Q9NQT6 498 aa18.86■□□□□ 0.61
PSPC1-203ENST00000471658 ZNF358Q9NW07 568 aa18.86■□□□□ 0.61
PSPC1-203ENST00000471658 TLK1Q9UKI8 766 aa18.86■□□□□ 0.61
PSPC1-203ENST00000471658 TNRC6BQ9UPQ9 1833 aaKnown RBP18.86■□□□□ 0.61
PSPC1-203ENST00000471658 A0A1B0GTW7 788 aa18.85■□□□□ 0.61
PSPC1-203ENST00000471658 GPR89AB7ZAQ6 455 aa18.85■□□□□ 0.61
PSPC1-203ENST00000471658 SPAG7O75391 227 aa18.85■□□□□ 0.61
PSPC1-203ENST00000471658 RASGRP1O95267 797 aa18.85■□□□□ 0.61
PSPC1-203ENST00000471658 GPR89BP0CG08 455 aa18.85■□□□□ 0.61
PSPC1-203ENST00000471658 PREPP48147 710 aa18.85■□□□□ 0.61
PSPC1-203ENST00000471658 MAGOHP61326 146 aaKnown RBP18.85■□□□□ 0.61
PSPC1-203ENST00000471658 BNC1Q01954 994 aa18.85■□□□□ 0.61
PSPC1-203ENST00000471658 HSPA14Q0VDF9 509 aa18.85■□□□□ 0.61
PSPC1-203ENST00000471658 TCF15Q12870 199 aa18.85■□□□□ 0.61
PSPC1-203ENST00000471658 OVGP1Q12889 678 aa18.85■□□□□ 0.61
PSPC1-203ENST00000471658 NFE2L1Q14494 772 aa18.85■□□□□ 0.61
PSPC1-203ENST00000471658 DCP2Q8IU60 420 aaKnown RBP18.85■□□□□ 0.61
PSPC1-203ENST00000471658 OR2L2Q8NH16 312 aa18.85■□□□□ 0.61
PSPC1-203ENST00000471658 CCL4L1Q8NHW4 92 aa18.85■□□□□ 0.61
PSPC1-203ENST00000471658 EEF1AKMT1Q8WVE0 214 aa18.85■□□□□ 0.61
PSPC1-203ENST00000471658 KCTD4Q8WVF5 259 aa18.85■□□□□ 0.61
PSPC1-203ENST00000471658 ATP6V1G3Q96LB4 118 aa18.85■□□□□ 0.61
PSPC1-203ENST00000471658 TMEM168Q9H0V1 697 aa18.85■□□□□ 0.61
PSPC1-203ENST00000471658 CDYLQ9Y232 598 aa18.85■□□□□ 0.61
PSPC1-203ENST00000471658 KCNK6Q9Y257 313 aa18.85■□□□□ 0.61
PSPC1-203ENST00000471658 MGAT4DA6NG13 374 aa18.85■□□□□ 0.61
PSPC1-203ENST00000471658 H3BQF6 201 aa18.85■□□□□ 0.61
PSPC1-203ENST00000471658 MAGEC1O60732 1142 aa18.85■□□□□ 0.61
PSPC1-203ENST00000471658 MPOP05164 745 aa18.85■□□□□ 0.61
PSPC1-203ENST00000471658 PDHA2P29803 388 aa18.85■□□□□ 0.61
PSPC1-203ENST00000471658 SKIV2L2P42285 1042 aaKnown RBP18.85■□□□□ 0.61
PSPC1-203ENST00000471658 HK3P52790 923 aa18.85■□□□□ 0.61
PSPC1-203ENST00000471658 C21orf59P57076 290 aa18.85■□□□□ 0.61
PSPC1-203ENST00000471658 SLC18A2Q05940 514 aa18.85■□□□□ 0.61
PSPC1-203ENST00000471658 INSCQ1MX18 579 aa18.85■□□□□ 0.61
PSPC1-203ENST00000471658 UGT3A1Q6NUS8 523 aa18.85■□□□□ 0.61
PSPC1-203ENST00000471658 AMZ2Q86W34 360 aa18.85■□□□□ 0.61
PSPC1-203ENST00000471658 SYT12Q8IV01 421 aa18.85■□□□□ 0.61
PSPC1-203ENST00000471658 NXNL1Q96CM4 212 aa18.85■□□□□ 0.61
PSPC1-203ENST00000471658 OR2M4Q96R27 311 aa18.85■□□□□ 0.61
PSPC1-203ENST00000471658 TSSK1BQ9BXA7 367 aa18.85■□□□□ 0.61
PSPC1-203ENST00000471658 C12orf65Q9H3J6 166 aaKnown RBP18.85■□□□□ 0.61
PSPC1-203ENST00000471658 POPDC3Q9HBV1 291 aa18.85■□□□□ 0.61
PSPC1-203ENST00000471658 KLC4Q9NSK0 619 aa18.85■□□□□ 0.61
PSPC1-203ENST00000471658 ANKRD6Q9Y2G4 727 aa18.85■□□□□ 0.61
PSPC1-203ENST00000471658 ACOT9Q9Y305 439 aa18.85■□□□□ 0.61
PSPC1-203ENST00000471658 SPAG17Q6Q759 2223 aa18.84■□□□□ 0.61
PSPC1-203ENST00000471658 SLC5A10A0PJK1 596 aa18.84■□□□□ 0.61
PSPC1-203ENST00000471658 F8W8V4 182 aa18.84■□□□□ 0.61
PSPC1-203ENST00000471658 GPC4O75487 556 aa18.84■□□□□ 0.61
PSPC1-203ENST00000471658 TSPAN12O95859 305 aa18.84■□□□□ 0.61
PSPC1-203ENST00000471658 TNFP01375 233 aa18.84■□□□□ 0.61
PSPC1-203ENST00000471658 CCDC166P0CW27 439 aa18.84■□□□□ 0.61
PSPC1-203ENST00000471658 GNSP15586 552 aa18.84■□□□□ 0.61
PSPC1-203ENST00000471658 ZNF37AP17032 561 aaPredicted RBP18.84■□□□□ 0.61
PSPC1-203ENST00000471658 CCNFP41002 786 aa18.84■□□□□ 0.61
PSPC1-203ENST00000471658 CSHL1Q14406 222 aa18.84■□□□□ 0.61
PSPC1-203ENST00000471658 KIF19Q2TAC6 998 aa18.84■□□□□ 0.61
PSPC1-203ENST00000471658 CDHR3Q6ZTQ4 885 aa18.84■□□□□ 0.61
PSPC1-203ENST00000471658 PARGQ86W56 976 aa18.84■□□□□ 0.61
PSPC1-203ENST00000471658 CENPLQ8N0S6 344 aaPredicted RBP18.84■□□□□ 0.61
PSPC1-203ENST00000471658 OXR1Q8N573 874 aa18.84■□□□□ 0.61
PSPC1-203ENST00000471658 COG4Q9H9E3 785 aa18.84■□□□□ 0.61
PSPC1-203ENST00000471658 DNAJC28Q9NX36 388 aa18.84■□□□□ 0.61
PSPC1-203ENST00000471658 IKZF3Q9UKT9 509 aa18.84■□□□□ 0.61
PSPC1-203ENST00000471658 SNX11Q9Y5W9 270 aa18.84■□□□□ 0.61
PSPC1-203ENST00000471658 DNMT3AQ9Y6K1 912 aaPredicted RBP18.84■□□□□ 0.61
PSPC1-203ENST00000471658 DGKBQ9Y6T7 804 aa18.84■□□□□ 0.61
PSPC1-203ENST00000471658 VPS13AQ96RL7 3174 aa18.83■□□□□ 0.61
PSPC1-203ENST00000471658 C17orf113A0A1B0GUU1 675 aa18.83■□□□□ 0.61
PSPC1-203ENST00000471658 PATE3B3GLJ2 98 aa18.83■□□□□ 0.61
PSPC1-203ENST00000471658 CELA2BP08218 269 aaPredicted RBP18.83■□□□□ 0.61
PSPC1-203ENST00000471658 AK4P27144 223 aaPredicted RBP18.83■□□□□ 0.61
PSPC1-203ENST00000471658 ATP5DP30049 168 aa18.83■□□□□ 0.61
PSPC1-203ENST00000471658 CTBSQ01459 385 aa18.83■□□□□ 0.61
PSPC1-203ENST00000471658 C1orf61Q13536 156 aa18.83■□□□□ 0.61
PSPC1-203ENST00000471658 TEAD4Q15561 434 aa18.83■□□□□ 0.61
PSPC1-203ENST00000471658 CCDC6Q16204 474 aa18.83■□□□□ 0.61
PSPC1-203ENST00000471658 TAF1BQ53T94 588 aaPredicted RBP18.83■□□□□ 0.61
PSPC1-203ENST00000471658 PLEKHS1Q5SXH7 462 aa18.83■□□□□ 0.61
PSPC1-203ENST00000471658 PEAR1Q5VY43 1037 aaPredicted RBP18.83■□□□□ 0.61
PSPC1-203ENST00000471658 PIWIL4Q7Z3Z4 852 aaKnown RBP18.83■□□□□ 0.61
PSPC1-203ENST00000471658 CLEC14AQ86T13 490 aa18.83■□□□□ 0.61
PSPC1-203ENST00000471658 PHACTR4Q8IZ21 702 aa18.83■□□□□ 0.61
PSPC1-203ENST00000471658 HM13Q8TCT9 377 aa18.83■□□□□ 0.61
PSPC1-203ENST00000471658 ACMSDQ8TDX5 336 aa18.83■□□□□ 0.61
PSPC1-203ENST00000471658 LINGO1Q96FE5 620 aa18.83■□□□□ 0.61
PSPC1-203ENST00000471658 UBXN10Q96LJ8 280 aa18.83■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms