RNA–Protein interactions for RNA: ENST00000471538.1

SPEN-204, Transcript of spen family transcriptional repressor, humanhuman

TSL 2

Gene SPEN, Length 1,404 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPEN-204ENST00000471538 ECT2LQ008S8 904 aa6.33□□□□□ -1.4
SPEN-204ENST00000471538 NFATC2Q13469 925 aa6.33□□□□□ -1.4
SPEN-204ENST00000471538 TRIM25Q14258 630 aaKnown RBP6.33□□□□□ -1.4
SPEN-204ENST00000471538 TRIP10Q15642 601 aa6.33□□□□□ -1.4
SPEN-204ENST00000471538 FUT11Q495W5 492 aa6.33□□□□□ -1.4
SPEN-204ENST00000471538 FBXO48Q5FWF7 155 aa6.33□□□□□ -1.4
SPEN-204ENST00000471538 PITRM1Q5JRX3 1037 aa6.33□□□□□ -1.4
SPEN-204ENST00000471538 LYPLAL1Q5VWZ2 237 aa6.33□□□□□ -1.4
SPEN-204ENST00000471538 OR52E8Q6IFG1 317 aa6.33□□□□□ -1.4
SPEN-204ENST00000471538 FAM151BQ6UXP7 276 aa6.33□□□□□ -1.4
SPEN-204ENST00000471538 MACC1Q6ZN28 852 aa6.33□□□□□ -1.4
SPEN-204ENST00000471538 RNF165Q6ZSG1 346 aa6.33□□□□□ -1.4
SPEN-204ENST00000471538 TPGS1Q6ZTW0 290 aa6.33□□□□□ -1.4
SPEN-204ENST00000471538 CCDC149Q6ZUS6 474 aa6.33□□□□□ -1.4
SPEN-204ENST00000471538 TAS2R42Q7RTR8 314 aa6.33□□□□□ -1.4
SPEN-204ENST00000471538 EFL1Q7Z2Z2 1120 aaKnown RBP6.33□□□□□ -1.4
SPEN-204ENST00000471538 SPATA19Q7Z5L4 167 aa6.33□□□□□ -1.4
SPEN-204ENST00000471538 ADAMTSL2Q86TH1 951 aa6.33□□□□□ -1.4
SPEN-204ENST00000471538 RBFAQ8N0V3 343 aa6.33□□□□□ -1.4
SPEN-204ENST00000471538 MIER2Q8N344 545 aa6.33□□□□□ -1.4
SPEN-204ENST00000471538 FIBCD1Q8N539 461 aa6.33□□□□□ -1.4
SPEN-204ENST00000471538 MINDY1Q8N5J2 469 aa6.33□□□□□ -1.4
SPEN-204ENST00000471538 RNF148Q8N7C7 305 aa6.33□□□□□ -1.4
SPEN-204ENST00000471538 TMEM102Q8N9M5 508 aaPredicted RBP6.33□□□□□ -1.4
SPEN-204ENST00000471538 FAM156AQ8NDB6 213 aa6.33□□□□□ -1.4
SPEN-204ENST00000471538 OR2AP1Q8NGE2 309 aa6.33□□□□□ -1.4
SPEN-204ENST00000471538 OR56A4Q8NGH8 313 aa6.33□□□□□ -1.4
SPEN-204ENST00000471538 OR2T11Q8NH01 316 aa6.33□□□□□ -1.4
SPEN-204ENST00000471538 TSPEARQ8WU66 669 aa6.33□□□□□ -1.4
SPEN-204ENST00000471538 CLP1Q92989 425 aaKnown RBP6.33□□□□□ -1.4
SPEN-204ENST00000471538 BHMTQ93088 406 aa6.33□□□□□ -1.4
SPEN-204ENST00000471538 TBRG4Q969Z0 631 aaKnown RBP eCLIP6.33□□□□□ -1.4
SPEN-204ENST00000471538 ISG20Q96AZ6 181 aaKnown RBP6.33□□□□□ -1.4
SPEN-204ENST00000471538 SLCO4A1Q96BD0 722 aa6.33□□□□□ -1.4
SPEN-204ENST00000471538 BTBD9Q96Q07 612 aa6.33□□□□□ -1.4
SPEN-204ENST00000471538 MCCC1Q96RQ3 725 aaPredicted RBP6.33□□□□□ -1.4
SPEN-204ENST00000471538 YME1L1Q96TA2 773 aa6.33□□□□□ -1.4
SPEN-204ENST00000471538 BRINP2Q9C0B6 783 aa6.33□□□□□ -1.4
SPEN-204ENST00000471538 VCX3BQ9H321 246 aa6.33□□□□□ -1.4
SPEN-204ENST00000471538 ATP13A3Q9H7F0 1226 aa6.33□□□□□ -1.4
SPEN-204ENST00000471538 SPAG4Q9NPE6 437 aa6.33□□□□□ -1.4
SPEN-204ENST00000471538 MRPL40Q9NQ50 206 aaKnown RBP6.33□□□□□ -1.4
SPEN-204ENST00000471538 LATS2Q9NRM7 1088 aa6.33□□□□□ -1.4
SPEN-204ENST00000471538 AIG1Q9NVV5 245 aa6.33□□□□□ -1.4
SPEN-204ENST00000471538 GEMIN8Q9NWZ8 242 aaKnown RBP6.33□□□□□ -1.4
SPEN-204ENST00000471538 BCAP29Q9UHQ4 241 aa6.33□□□□□ -1.4
SPEN-204ENST00000471538 EIF2B4Q9UI10 523 aaKnown RBP6.33□□□□□ -1.4
SPEN-204ENST00000471538 GNPTGQ9UJJ9 305 aa6.33□□□□□ -1.4
SPEN-204ENST00000471538 APPL1Q9UKG1 709 aa6.33□□□□□ -1.4
SPEN-204ENST00000471538 CROTQ9UKG9 612 aa6.33□□□□□ -1.4
SPEN-204ENST00000471538 HS3ST2Q9Y278 367 aa6.33□□□□□ -1.4
SPEN-204ENST00000471538 NDUFAF1Q9Y375 327 aa6.33□□□□□ -1.4
SPEN-204ENST00000471538 SH3BP1Q9Y3L3 701 aa6.33□□□□□ -1.4
SPEN-204ENST00000471538 TIMM22Q9Y584 194 aa6.33□□□□□ -1.4
SPEN-204ENST00000471538 SPTBN4Q9H254 2564 aa6.32□□□□□ -1.4
SPEN-204ENST00000471538 CFAP54Q96N23 3096 aa6.32□□□□□ -1.4
SPEN-204ENST00000471538 MTCL1Q9Y4B5 1905 aaKnown RBP6.32□□□□□ -1.4
SPEN-204ENST00000471538 WDR87Q6ZQQ6 2873 aa6.32□□□□□ -1.4
SPEN-204ENST00000471538 GLYATL1P3A0A0U1RQE8 302 aa6.32□□□□□ -1.4
SPEN-204ENST00000471538 C1orf232A0A0U1RR37 186 aa6.32□□□□□ -1.4
SPEN-204ENST00000471538 NPIPB15A6NHN6 443 aaPredicted RBP6.32□□□□□ -1.4
SPEN-204ENST00000471538 NCF1BA6NI72 391 aaPredicted RBP6.32□□□□□ -1.4
SPEN-204ENST00000471538 EIF4E1BA6NMX2 242 aaKnown RBP6.32□□□□□ -1.4
SPEN-204ENST00000471538 NCF1CA8MVU1 366 aaPredicted RBP6.32□□□□□ -1.4
SPEN-204ENST00000471538 E5RI56 91 aa6.32□□□□□ -1.4
SPEN-204ENST00000471538 NME4O00746 187 aa6.32□□□□□ -1.4
SPEN-204ENST00000471538 OR7A17O14581 309 aa6.32□□□□□ -1.4
SPEN-204ENST00000471538 TAPBPO15533 448 aa6.32□□□□□ -1.4
SPEN-204ENST00000471538 FFAR2O15552 330 aa6.32□□□□□ -1.4
SPEN-204ENST00000471538 SNX2O60749 519 aa6.32□□□□□ -1.4
SPEN-204ENST00000471538 RNASEH1O60930 286 aaKnown RBP6.32□□□□□ -1.4
SPEN-204ENST00000471538 RNASEH2AO75792 299 aaKnown RBP6.32□□□□□ -1.4
SPEN-204ENST00000471538 LRG1P02750 347 aa6.32□□□□□ -1.4
SPEN-204ENST00000471538 CYBBP04839 570 aa6.32□□□□□ -1.4
SPEN-204ENST00000471538 LYNP07948 512 aa6.32□□□□□ -1.4
SPEN-204ENST00000471538 HGFP14210 728 aa6.32□□□□□ -1.4
SPEN-204ENST00000471538 NCF1P14598 390 aaPredicted RBP6.32□□□□□ -1.4
SPEN-204ENST00000471538 MYOGP15173 224 aa6.32□□□□□ -1.4
SPEN-204ENST00000471538 GJA1P17302 382 aa6.32□□□□□ -1.4
SPEN-204ENST00000471538 ITGALP20701 1170 aa6.32□□□□□ -1.4
SPEN-204ENST00000471538 LHCGRP22888 699 aa6.32□□□□□ -1.4
SPEN-204ENST00000471538 SERPINA4P29622 427 aa6.32□□□□□ -1.4
SPEN-204ENST00000471538 STK19P49842 368 aaPredicted RBP6.32□□□□□ -1.4
SPEN-204ENST00000471538 DIO3P55073 304 aa6.32□□□□□ -1.4
SPEN-204ENST00000471538 RHDQ02161 417 aa6.32□□□□□ -1.4
SPEN-204ENST00000471538 FOXM1Q08050 763 aa6.32□□□□□ -1.4
SPEN-204ENST00000471538 RALGDSQ12967 914 aa6.32□□□□□ -1.4
SPEN-204ENST00000471538 TRAF3Q13114 568 aa6.32□□□□□ -1.4
SPEN-204ENST00000471538 RCAN2Q14206 197 aa6.32□□□□□ -1.4
SPEN-204ENST00000471538 GRM2Q14416 872 aa6.32□□□□□ -1.4
SPEN-204ENST00000471538 CHRNA6Q15825 494 aa6.32□□□□□ -1.4
SPEN-204ENST00000471538 KIF19Q2TAC6 998 aa6.32□□□□□ -1.4
SPEN-204ENST00000471538 MMEL1Q495T6 779 aa6.32□□□□□ -1.4
SPEN-204ENST00000471538 GPR33Q49SQ1 333 aa6.32□□□□□ -1.4
SPEN-204ENST00000471538 PDCD4Q53EL6 469 aaKnown RBP6.32□□□□□ -1.4
SPEN-204ENST00000471538 SAMD4BQ5PRF9 694 aaKnown RBP6.32□□□□□ -1.4
SPEN-204ENST00000471538 GPRC6AQ5T6X5 926 aa6.32□□□□□ -1.4
SPEN-204ENST00000471538 GRAMD4Q6IC98 578 aa6.32□□□□□ -1.4
SPEN-204ENST00000471538 LETMD1Q6P1Q0 360 aa6.32□□□□□ -1.4
SPEN-204ENST00000471538 C22orf39Q6P5X5 142 aa6.32□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms