RNA–Protein interactions for RNA: ENST00000470495.1

HOXB3-205, Transcript of homeobox B3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXB3, Length 4,208 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-205ENST00000470495 UGT1A3P35503 534 aa16.35■□□□□ 0.21
HOXB3-205ENST00000470495 UGT1A5P35504 534 aa16.35■□□□□ 0.21
HOXB3-205ENST00000470495 VBP1P61758 197 aa16.35■□□□□ 0.21
HOXB3-205ENST00000470495 FOLH1Q04609 750 aa16.35■□□□□ 0.21
HOXB3-205ENST00000470495 MBTPS1Q14703 1052 aa16.35■□□□□ 0.21
HOXB3-205ENST00000470495 C6orf10Q5SRN2 563 aa16.35■□□□□ 0.21
HOXB3-205ENST00000470495 GARNL3Q5VVW2 1013 aa16.35■□□□□ 0.21
HOXB3-205ENST00000470495 GPR107Q5VW38 600 aa16.35■□□□□ 0.21
HOXB3-205ENST00000470495 TXNDC8Q6A555 127 aa16.35■□□□□ 0.21
HOXB3-205ENST00000470495 AFTPHQ6ULP2 937 aa16.35■□□□□ 0.21
HOXB3-205ENST00000470495 RALGPS2Q86X27 583 aaPredicted RBP16.35■□□□□ 0.21
HOXB3-205ENST00000470495 TSPAN14Q8NG11 270 aa16.35■□□□□ 0.21
HOXB3-205ENST00000470495 COPS4Q9BT78 406 aa16.35■□□□□ 0.21
HOXB3-205ENST00000470495 CCDC59Q9P031 241 aaKnown RBP16.35■□□□□ 0.21
HOXB3-205ENST00000470495 TRAF6Q9Y4K3 522 aa16.35■□□□□ 0.21
HOXB3-205ENST00000470495 PCDHGA8Q9Y5G5 932 aa16.35■□□□□ 0.21
HOXB3-205ENST00000470495 C9JVG2 144 aa16.34■□□□□ 0.21
HOXB3-205ENST00000470495 TMEM127O75204 238 aa16.34■□□□□ 0.21
HOXB3-205ENST00000470495 SNNO75324 88 aaPredicted RBP16.34■□□□□ 0.21
HOXB3-205ENST00000470495 OR7A10O76100 309 aa16.34■□□□□ 0.21
HOXB3-205ENST00000470495 ANPEPP15144 967 aa16.34■□□□□ 0.21
HOXB3-205ENST00000470495 GJA1P17302 382 aa16.34■□□□□ 0.21
HOXB3-205ENST00000470495 ZNF45Q02386 682 aa16.34■□□□□ 0.21
HOXB3-205ENST00000470495 ATAD3BQ5T9A4 648 aa16.34■□□□□ 0.21
HOXB3-205ENST00000470495 GALNT18Q6P9A2 607 aa16.34■□□□□ 0.21
HOXB3-205ENST00000470495 FAM151BQ6UXP7 276 aa16.34■□□□□ 0.21
HOXB3-205ENST00000470495 CYP2R1Q6VVX0 501 aa16.34■□□□□ 0.21
HOXB3-205ENST00000470495 STAG3L4Q8TBR4 150 aa16.34■□□□□ 0.21
HOXB3-205ENST00000470495 DIS3LQ8TF46 1054 aaKnown RBP16.34■□□□□ 0.21
HOXB3-205ENST00000470495 GPR21Q99679 349 aa16.34■□□□□ 0.21
HOXB3-205ENST00000470495 PLAC1Q9HBJ0 212 aa16.34■□□□□ 0.21
HOXB3-205ENST00000470495 FKBPLQ9UIM3 349 aa16.34■□□□□ 0.21
HOXB3-205ENST00000470495 CPQQ9Y646 472 aa16.34■□□□□ 0.21
HOXB3-205ENST00000470495 UBXN8O00124 270 aa16.34■□□□□ 0.21
HOXB3-205ENST00000470495 TNFRSF10BO14763 440 aa16.34■□□□□ 0.21
HOXB3-205ENST00000470495 ADAM12O43184 909 aa16.34■□□□□ 0.21
HOXB3-205ENST00000470495 CST5P28325 142 aaPredicted RBP16.34■□□□□ 0.21
HOXB3-205ENST00000470495 RAD23AP54725 363 aa16.34■□□□□ 0.21
HOXB3-205ENST00000470495 MYBPC1Q00872 1141 aa16.34■□□□□ 0.21
HOXB3-205ENST00000470495 CCDC85BQ15834 202 aaPredicted RBP16.34■□□□□ 0.21
HOXB3-205ENST00000470495 LPCAT4Q643R3 524 aa16.34■□□□□ 0.21
HOXB3-205ENST00000470495 LIMS2Q7Z4I7 341 aa16.34■□□□□ 0.21
HOXB3-205ENST00000470495 TMEM173Q86WV6 379 aaPredicted RBP16.34■□□□□ 0.21
HOXB3-205ENST00000470495 GRPEL2Q8TAA5 225 aa16.34■□□□□ 0.21
HOXB3-205ENST00000470495 HERVK_113Q902F9 699 aa16.34■□□□□ 0.21
HOXB3-205ENST00000470495 PTCD3Q96EY7 689 aaKnown RBP16.34■□□□□ 0.21
HOXB3-205ENST00000470495 ZNF221Q9UK13 617 aa16.34■□□□□ 0.21
HOXB3-205ENST00000470495 YIPF1Q9Y548 306 aa16.34■□□□□ 0.21
HOXB3-205ENST00000470495 SESN1Q9Y6P5 492 aa16.34■□□□□ 0.21
HOXB3-205ENST00000470495 TRAFD1O14545 582 aaPredicted RBP16.34■□□□□ 0.21
HOXB3-205ENST00000470495 ARMC4Q5T2S8 1044 aa16.34■□□□□ 0.21
HOXB3-205ENST00000470495 PYHIN1Q6K0P9 492 aa16.34■□□□□ 0.21
HOXB3-205ENST00000470495 RANBP10Q6VN20 620 aa16.34■□□□□ 0.21
HOXB3-205ENST00000470495 DNAJB7Q7Z6W7 309 aaPredicted RBP16.34■□□□□ 0.21
HOXB3-205ENST00000470495 ASCC1Q8N9N2 400 aaKnown RBP16.34■□□□□ 0.21
HOXB3-205ENST00000470495 PIF1Q9H611 641 aa16.34■□□□□ 0.21
HOXB3-205ENST00000470495 WWOXQ9NZC7 414 aa16.34■□□□□ 0.21
HOXB3-205ENST00000470495 MARCH4Q9P2E8 410 aaPredicted RBP16.34■□□□□ 0.21
HOXB3-205ENST00000470495 FAM155AB1AL88 458 aaPredicted RBP16.34■□□□□ 0.21
HOXB3-205ENST00000470495 BTN3A3O00478 584 aa16.34■□□□□ 0.21
HOXB3-205ENST00000470495 MRASO14807 208 aa16.34■□□□□ 0.21
HOXB3-205ENST00000470495 COCHO43405 550 aa16.34■□□□□ 0.21
HOXB3-205ENST00000470495 APLP1P51693 650 aa16.34■□□□□ 0.21
HOXB3-205ENST00000470495 IL2P60568 153 aa16.34■□□□□ 0.21
HOXB3-205ENST00000470495 DSC1Q08554 894 aa16.34■□□□□ 0.21
HOXB3-205ENST00000470495 USF2Q15853 346 aaPredicted RBP16.34■□□□□ 0.21
HOXB3-205ENST00000470495 KCTD11Q693B1 232 aa16.34■□□□□ 0.21
HOXB3-205ENST00000470495 LIN28BQ6ZN17 250 aaKnown RBP eCLIP16.34■□□□□ 0.21
HOXB3-205ENST00000470495 BNIPLQ7Z465 357 aa16.34■□□□□ 0.21
HOXB3-205ENST00000470495 STYXQ8WUJ0 223 aa16.34■□□□□ 0.21
HOXB3-205ENST00000470495 ATL1Q8WXF7 558 aa16.34■□□□□ 0.21
HOXB3-205ENST00000470495 CNDP1Q96KN2 507 aa16.34■□□□□ 0.21
HOXB3-205ENST00000470495 ASB8Q9H765 288 aa16.34■□□□□ 0.21
HOXB3-205ENST00000470495 MAT2BQ9NZL9 334 aa16.34■□□□□ 0.21
HOXB3-205ENST00000470495 OTOFQ9HC10 1997 aa16.33■□□□□ 0.21
HOXB3-205ENST00000470495 SIX3O95343 332 aaPredicted RBP16.33■□□□□ 0.21
HOXB3-205ENST00000470495 TTKP33981 857 aa16.33■□□□□ 0.21
HOXB3-205ENST00000470495 RAB15P59190 212 aa16.33■□□□□ 0.21
HOXB3-205ENST00000470495 CYP4F8P98187 520 aa16.33■□□□□ 0.21
HOXB3-205ENST00000470495 TOP3AQ13472 1001 aaPredicted RBP16.33■□□□□ 0.21
HOXB3-205ENST00000470495 CCDC58Q4VC31 144 aa16.33■□□□□ 0.21
HOXB3-205ENST00000470495 FRMD7Q6ZUT3 714 aa16.33■□□□□ 0.21
HOXB3-205ENST00000470495 AMIGO2Q86SJ2 522 aa16.33■□□□□ 0.21
HOXB3-205ENST00000470495 DDX53Q86TM3 631 aaKnown RBP16.33■□□□□ 0.21
HOXB3-205ENST00000470495 SLC38A6Q8IZM9 456 aa16.33■□□□□ 0.21
HOXB3-205ENST00000470495 HS6ST3Q8IZP7 471 aa16.33■□□□□ 0.21
HOXB3-205ENST00000470495 C2CD4AQ8NCU7 369 aaPredicted RBP16.33■□□□□ 0.21
HOXB3-205ENST00000470495 TRIM15Q9C019 465 aa16.33■□□□□ 0.21
HOXB3-205ENST00000470495 SPG21Q9NZD8 308 aa16.33■□□□□ 0.21
HOXB3-205ENST00000470495 CFAP97Q9P2B7 532 aa16.33■□□□□ 0.21
HOXB3-205ENST00000470495 ARHGEF7Q14155 803 aa16.33■□□□□ 0.2
HOXB3-205ENST00000470495 CYP2A13Q16696 494 aa16.33■□□□□ 0.2
HOXB3-205ENST00000470495 GPSM1Q86YR5 675 aa16.33■□□□□ 0.2
HOXB3-205ENST00000470495 RASSF5Q8WWW0 418 aa16.33■□□□□ 0.2
HOXB3-205ENST00000470495 MSANTD3Q96H12 275 aa16.33■□□□□ 0.2
HOXB3-205ENST00000470495 RPL10LQ96L21 214 aaKnown RBP16.33■□□□□ 0.2
HOXB3-205ENST00000470495 CIB1Q99828 191 aa16.33■□□□□ 0.2
HOXB3-205ENST00000470495 HGH1Q9BTY7 390 aa16.33■□□□□ 0.2
HOXB3-205ENST00000470495 TNKS2Q9H2K2 1166 aa16.33■□□□□ 0.2
HOXB3-205ENST00000470495 TP63Q9H3D4 680 aaPredicted RBP16.33■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms