RNA–Protein interactions for RNA: ENST00000469744.1

MRPL28-208, Transcript of mitochondrial ribosomal protein L28, humanhuman

TSL 1 (best)

Gene MRPL28, Length 1,467 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL28-208ENST00000469744 DCBLD2Q96PD2 775 aa17.42■□□□□ 0.38
MRPL28-208ENST00000469744 GORASP1Q9BQQ3 440 aa17.42■□□□□ 0.38
MRPL28-208ENST00000469744 NRSN2Q9GZP1 204 aa17.42■□□□□ 0.38
MRPL28-208ENST00000469744 SYNDIG1Q9H7V2 258 aa17.42■□□□□ 0.38
MRPL28-208ENST00000469744 LRRC40Q9H9A6 602 aa17.42■□□□□ 0.38
MRPL28-208ENST00000469744 PHPT1Q9NRX4 125 aaPredicted RBP17.42■□□□□ 0.38
MRPL28-208ENST00000469744 HAUS2Q9NVX0 235 aa17.42■□□□□ 0.38
MRPL28-208ENST00000469744 BFARQ9NZS9 450 aa17.42■□□□□ 0.38
MRPL28-208ENST00000469744 GPSM3Q9Y4H4 160 aa17.42■□□□□ 0.38
MRPL28-208ENST00000469744 ADAMTS20P59510 1910 aa17.42■□□□□ 0.38
MRPL28-208ENST00000469744 KIF26BQ2KJY2 2108 aa17.42■□□□□ 0.38
MRPL28-208ENST00000469744 CAPN8A6NHC0 703 aa17.41■□□□□ 0.38
MRPL28-208ENST00000469744 BRINP1O60477 761 aa17.41■□□□□ 0.38
MRPL28-208ENST00000469744 EDF1O60869 148 aaKnown RBP17.41■□□□□ 0.38
MRPL28-208ENST00000469744 POLBP06746 335 aa17.41■□□□□ 0.38
MRPL28-208ENST00000469744 HOXC4P09017 264 aaPredicted RBP17.41■□□□□ 0.38
MRPL28-208ENST00000469744 CES1P23141 567 aa17.41■□□□□ 0.38
MRPL28-208ENST00000469744 SESN2P58004 480 aaPredicted RBP17.41■□□□□ 0.38
MRPL28-208ENST00000469744 CDK3Q00526 305 aa17.41■□□□□ 0.38
MRPL28-208ENST00000469744 PTSQ03393 145 aa17.41■□□□□ 0.38
MRPL28-208ENST00000469744 MGAT5Q09328 741 aa17.41■□□□□ 0.38
MRPL28-208ENST00000469744 RTP5Q14D33 572 aa17.41■□□□□ 0.38
MRPL28-208ENST00000469744 TRMT10BQ6PF06 316 aaKnown RBP17.41■□□□□ 0.38
MRPL28-208ENST00000469744 DOK6Q6PKX4 331 aa17.41■□□□□ 0.38
MRPL28-208ENST00000469744 TECPR1Q7Z6L1 1165 aa17.41■□□□□ 0.38
MRPL28-208ENST00000469744 TAF8Q7Z7C8 310 aa17.41■□□□□ 0.38
MRPL28-208ENST00000469744 LINC00523Q86TU6 105 aa17.41■□□□□ 0.38
MRPL28-208ENST00000469744 TRIM42Q8IWZ5 723 aa17.41■□□□□ 0.38
MRPL28-208ENST00000469744 NDUFAF2Q8N183 169 aa17.41■□□□□ 0.38
MRPL28-208ENST00000469744 ZNF75CPQ92670 426 aaPredicted RBP17.41■□□□□ 0.38
MRPL28-208ENST00000469744 AGAP3Q96P47 875 aa17.41■□□□□ 0.38
MRPL28-208ENST00000469744 DEPDC7Q96QD5 511 aa17.41■□□□□ 0.38
MRPL28-208ENST00000469744 CCDC3Q9BQI4 270 aa17.41■□□□□ 0.38
MRPL28-208ENST00000469744 TEX101Q9BY14 249 aa17.41■□□□□ 0.38
MRPL28-208ENST00000469744 CARS2Q9HA77 564 aaKnown RBP17.41■□□□□ 0.38
MRPL28-208ENST00000469744 GRID1Q9ULK0 1009 aa17.41■□□□□ 0.38
MRPL28-208ENST00000469744 AAR2Q9Y312 384 aaKnown RBP17.41■□□□□ 0.38
MRPL28-208ENST00000469744 COPEO14579 308 aa17.4■□□□□ 0.38
MRPL28-208ENST00000469744 TNFRSF10CO14798 259 aa17.4■□□□□ 0.38
MRPL28-208ENST00000469744 USP12O75317 370 aa17.4■□□□□ 0.38
MRPL28-208ENST00000469744 RFPL1O75677 317 aa17.4■□□□□ 0.38
MRPL28-208ENST00000469744 SOD1P00441 154 aa17.4■□□□□ 0.38
MRPL28-208ENST00000469744 FUCA1P04066 466 aa17.4■□□□□ 0.38
MRPL28-208ENST00000469744 MPOP05164 745 aa17.4■□□□□ 0.38
MRPL28-208ENST00000469744 PYGBP11216 843 aa17.4■□□□□ 0.38
MRPL28-208ENST00000469744 POLD2P49005 469 aa17.4■□□□□ 0.38
MRPL28-208ENST00000469744 GALNT3Q14435 633 aa17.4■□□□□ 0.38
MRPL28-208ENST00000469744 CRYMQ14894 314 aa17.4■□□□□ 0.38
MRPL28-208ENST00000469744 DBN1Q16643 649 aa17.4■□□□□ 0.38
MRPL28-208ENST00000469744 CGB2Q6NT52 195 aa17.4■□□□□ 0.38
MRPL28-208ENST00000469744 CASC4Q6P4E1 433 aa17.4■□□□□ 0.38
MRPL28-208ENST00000469744 KDELC2Q7Z4H8 507 aa17.4■□□□□ 0.38
MRPL28-208ENST00000469744 TRIM74Q86UV6 250 aa17.4■□□□□ 0.38
MRPL28-208ENST00000469744 CACTIN-AS1Q8N1I8 211 aa17.4■□□□□ 0.38
MRPL28-208ENST00000469744 FAM46DQ8NEK8 389 aa17.4■□□□□ 0.38
MRPL28-208ENST00000469744 ZNF398Q8TD17 642 aa17.4■□□□□ 0.38
MRPL28-208ENST00000469744 NAT6Q93015 286 aa17.4■□□□□ 0.38
MRPL28-208ENST00000469744 CCDC74AQ96AQ1 378 aa17.4■□□□□ 0.38
MRPL28-208ENST00000469744 AP2M1Q96CW1 435 aa17.4■□□□□ 0.38
MRPL28-208ENST00000469744 FCRL5Q96RD9 977 aa17.4■□□□□ 0.38
MRPL28-208ENST00000469744 ABCG8Q9H221 673 aa17.4■□□□□ 0.38
MRPL28-208ENST00000469744 SYBUQ9NX95 663 aa17.4■□□□□ 0.38
MRPL28-208ENST00000469744 KLHL14Q9P2G3 628 aa17.4■□□□□ 0.38
MRPL28-208ENST00000469744 B4DGG1 531 aa17.39■□□□□ 0.37
MRPL28-208ENST00000469744 ANKRD65E5RJM6 399 aa17.39■□□□□ 0.37
MRPL28-208ENST00000469744 TLX3O43711 291 aaPredicted RBP17.39■□□□□ 0.37
MRPL28-208ENST00000469744 PIAS1O75925 651 aa17.39■□□□□ 0.37
MRPL28-208ENST00000469744 USP1O94782 785 aa17.39■□□□□ 0.37
MRPL28-208ENST00000469744 CLDN7O95471 211 aa17.39■□□□□ 0.37
MRPL28-208ENST00000469744 CEACAM5P06731 702 aa17.39■□□□□ 0.37
MRPL28-208ENST00000469744 NFKB1P19838 968 aa17.39■□□□□ 0.37
MRPL28-208ENST00000469744 ADRA1DP25100 572 aa17.39■□□□□ 0.37
MRPL28-208ENST00000469744 GPR1P46091 355 aa17.39■□□□□ 0.37
MRPL28-208ENST00000469744 GNPDA1P46926 289 aa17.39■□□□□ 0.37
MRPL28-208ENST00000469744 STC1P52823 247 aa17.39■□□□□ 0.37
MRPL28-208ENST00000469744 COL28A1Q2UY09 1125 aa17.39■□□□□ 0.37
MRPL28-208ENST00000469744 TMEM135Q86UB9 458 aa17.39■□□□□ 0.37
MRPL28-208ENST00000469744 C10orf67Q8IYJ2 551 aa17.39■□□□□ 0.37
MRPL28-208ENST00000469744 AGAP2Q99490 1192 aa17.39■□□□□ 0.37
MRPL28-208ENST00000469744 MLPHQ9BV36 600 aaPredicted RBP17.39■□□□□ 0.37
MRPL28-208ENST00000469744 RASSF4Q9H2L5 321 aa17.39■□□□□ 0.37
MRPL28-208ENST00000469744 LHX6Q9UPM6 363 aa17.39■□□□□ 0.37
MRPL28-208ENST00000469744 C1orf232A0A0U1RR37 186 aa17.38■□□□□ 0.37
MRPL28-208ENST00000469744 FAM237BA0A1B0GVD1 139 aa17.38■□□□□ 0.37
MRPL28-208ENST00000469744 KLF11O14901 512 aa17.38■□□□□ 0.37
MRPL28-208ENST00000469744 ANXA9O76027 345 aa17.38■□□□□ 0.37
MRPL28-208ENST00000469744 ZNF30P17039 623 aa17.38■□□□□ 0.37
MRPL28-208ENST00000469744 CRHR1P34998 444 aa17.38■□□□□ 0.37
MRPL28-208ENST00000469744 ZKSCAN8Q15776 578 aaPredicted RBP17.38■□□□□ 0.37
MRPL28-208ENST00000469744 PCSK7Q16549 785 aa17.38■□□□□ 0.37
MRPL28-208ENST00000469744 ISXQ2M1V0 245 aa17.38■□□□□ 0.37
MRPL28-208ENST00000469744 SDR16C5Q8N3Y7 309 aa17.38■□□□□ 0.37
MRPL28-208ENST00000469744 OR52K1Q8NGK4 314 aa17.38■□□□□ 0.37
MRPL28-208ENST00000469744 RAB3IL1Q8TBN0 382 aa17.38■□□□□ 0.37
MRPL28-208ENST00000469744 ATXN7L3BQ96GX2 97 aa17.38■□□□□ 0.37
MRPL28-208ENST00000469744 RIOK2Q9BVS4 552 aaKnown RBP17.38■□□□□ 0.37
MRPL28-208ENST00000469744 IL22Q9GZX6 179 aa17.38■□□□□ 0.37
MRPL28-208ENST00000469744 IQCGQ9H095 443 aaKnown RBP17.38■□□□□ 0.37
MRPL28-208ENST00000469744 KCTD5Q9NXV2 234 aa17.38■□□□□ 0.37
MRPL28-208ENST00000469744 SUFUQ9UMX1 484 aa17.38■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms