RNA–Protein interactions for RNA: ENST00000469163.1

NUP50-214, Transcript of nucleoporin 50, humanhuman

TSL 2

Gene NUP50, Length 3,507 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-214ENST00000469163 TMEM30AQ9NV96 361 aa9.83□□□□□ -0.84
NUP50-214ENST00000469163 EVA1BQ9NVM1 165 aa9.83□□□□□ -0.84
NUP50-214ENST00000469163 CCDC59Q9P031 241 aaKnown RBP9.83□□□□□ -0.84
NUP50-214ENST00000469163 TMEM9Q9P0T7 183 aa9.83□□□□□ -0.84
NUP50-214ENST00000469163 WBP11Q9Y2W2 641 aaKnown RBP9.83□□□□□ -0.84
NUP50-214ENST00000469163 ZDBF2Q9HCK1 2354 aa9.83□□□□□ -0.84
NUP50-214ENST00000469163 SAGE2PA6NJ88 616 aa9.83□□□□□ -0.84
NUP50-214ENST00000469163 EEF2KO00418 725 aaKnown RBP9.83□□□□□ -0.84
NUP50-214ENST00000469163 PMPCBO75439 489 aa9.83□□□□□ -0.84
NUP50-214ENST00000469163 RHOBTB1O94844 696 aa9.83□□□□□ -0.84
NUP50-214ENST00000469163 CXCL14O95715 111 aa9.83□□□□□ -0.84
NUP50-214ENST00000469163 FGBP02675 491 aa9.83□□□□□ -0.84
NUP50-214ENST00000469163 FCER2P06734 321 aa9.83□□□□□ -0.84
NUP50-214ENST00000469163 PIRTP0C851 137 aa9.83□□□□□ -0.84
NUP50-214ENST00000469163 IL12AP29459 219 aa9.83□□□□□ -0.84
NUP50-214ENST00000469163 HTR7P34969 479 aa9.83□□□□□ -0.84
NUP50-214ENST00000469163 PGFP49763 221 aa9.83□□□□□ -0.84
NUP50-214ENST00000469163 KPNA2P52292 529 aaKnown RBP9.83□□□□□ -0.84
NUP50-214ENST00000469163 MAXP61244 160 aa9.83□□□□□ -0.84
NUP50-214ENST00000469163 SNRPD2P62316 118 aaKnown RBP9.83□□□□□ -0.84
NUP50-214ENST00000469163 CSNK2BP67870 215 aa9.83□□□□□ -0.84
NUP50-214ENST00000469163 UPP1Q16831 310 aa9.83□□□□□ -0.84
NUP50-214ENST00000469163 AGAP6Q5VW22 663 aa9.83□□□□□ -0.84
NUP50-214ENST00000469163 TMEM199Q8N511 208 aa9.83□□□□□ -0.84
NUP50-214ENST00000469163 NAT16Q8N8M0 369 aa9.83□□□□□ -0.84
NUP50-214ENST00000469163 ANKRD52Q8NB46 1076 aa9.83□□□□□ -0.84
NUP50-214ENST00000469163 OR2T34Q8NGX1 318 aa9.83□□□□□ -0.84
NUP50-214ENST00000469163 AGAP4Q96P64 663 aa9.83□□□□□ -0.84
NUP50-214ENST00000469163 MOGAT1Q96PD6 335 aa9.83□□□□□ -0.84
NUP50-214ENST00000469163 FAM111AQ96PZ2 611 aa9.83□□□□□ -0.84
NUP50-214ENST00000469163 GAS2L1Q99501 681 aaPredicted RBP9.83□□□□□ -0.84
NUP50-214ENST00000469163 DOK1Q99704 481 aa9.83□□□□□ -0.84
NUP50-214ENST00000469163 NUSAP1Q9BXS6 441 aaKnown RBP9.83□□□□□ -0.84
NUP50-214ENST00000469163 REXO4Q9GZR2 422 aaKnown RBP9.83□□□□□ -0.84
NUP50-214ENST00000469163 CYP3A43Q9HB55 503 aa9.83□□□□□ -0.84
NUP50-214ENST00000469163 TINAGQ9UJW2 476 aa9.83□□□□□ -0.84
NUP50-214ENST00000469163 SNX5Q9Y5X3 404 aa9.83□□□□□ -0.84
NUP50-214ENST00000469163 M0R3G1 203 aa9.83□□□□□ -0.84
NUP50-214ENST00000469163 SPNP16150 400 aa9.83□□□□□ -0.84
NUP50-214ENST00000469163 KCNJ5P48544 419 aa9.83□□□□□ -0.84
NUP50-214ENST00000469163 CREB5Q02930 508 aa9.83□□□□□ -0.84
NUP50-214ENST00000469163 TCTN1Q2MV58 587 aa9.83□□□□□ -0.84
NUP50-214ENST00000469163 IZUMO3Q5VZ72 239 aa9.83□□□□□ -0.84
NUP50-214ENST00000469163 FAM91A1Q658Y4 838 aa9.83□□□□□ -0.84
NUP50-214ENST00000469163 RAP1GAP2Q684P5 730 aa9.83□□□□□ -0.84
NUP50-214ENST00000469163 POMZP3Q6PJE2 187 aa9.83□□□□□ -0.84
NUP50-214ENST00000469163 KCNT2Q6UVM3 1135 aa9.83□□□□□ -0.84
NUP50-214ENST00000469163 ANKS1BQ7Z6G8 1248 aa9.83□□□□□ -0.84
NUP50-214ENST00000469163 SLC44A2Q8IWA5 706 aaPredicted RBP9.83□□□□□ -0.84
NUP50-214ENST00000469163 PALM2Q8IXS6 379 aa9.83□□□□□ -0.84
NUP50-214ENST00000469163 PNPLA1Q8N8W4 532 aa9.83□□□□□ -0.84
NUP50-214ENST00000469163 GLB1L3Q8NCI6 653 aaPredicted RBP9.83□□□□□ -0.84
NUP50-214ENST00000469163 BIRC7Q96CA5 298 aa9.83□□□□□ -0.84
NUP50-214ENST00000469163 TSGA13Q96PP4 275 aa9.83□□□□□ -0.84
NUP50-214ENST00000469163 SERPINI1Q99574 410 aa9.83□□□□□ -0.84
NUP50-214ENST00000469163 C8orf33Q9H7E9 229 aaPredicted RBP9.83□□□□□ -0.84
NUP50-214ENST00000469163 ARNT2Q9HBZ2 717 aa9.83□□□□□ -0.84
NUP50-214ENST00000469163 CNTN3Q9P232 1028 aa9.83□□□□□ -0.84
NUP50-214ENST00000469163 PCYOX1Q9UHG3 505 aa9.83□□□□□ -0.84
NUP50-214ENST00000469163 RIMS3Q9UJD0 308 aa9.83□□□□□ -0.84
NUP50-214ENST00000469163 Q9Y3F1 56 aa9.83□□□□□ -0.84
NUP50-214ENST00000469163 GRXCR2A6NFK2 248 aa9.82□□□□□ -0.84
NUP50-214ENST00000469163 GCATO75600 419 aa9.82□□□□□ -0.84
NUP50-214ENST00000469163 TRUB2O95900 331 aaKnown RBP9.82□□□□□ -0.84
NUP50-214ENST00000469163 APOC1P02654 83 aa9.82□□□□□ -0.84
NUP50-214ENST00000469163 LTFP02788 710 aa9.82□□□□□ -0.84
NUP50-214ENST00000469163 SRCP12931 536 aa9.82□□□□□ -0.84
NUP50-214ENST00000469163 CCT3P49368 545 aaKnown RBP9.82□□□□□ -0.84
NUP50-214ENST00000469163 PUDPQ08623 228 aa9.82□□□□□ -0.84
NUP50-214ENST00000469163 NAB1Q13506 487 aa9.82□□□□□ -0.84
NUP50-214ENST00000469163 FAM109BQ6ICB4 259 aaPredicted RBP9.82□□□□□ -0.84
NUP50-214ENST00000469163 DPY19L2P1Q6NXN4 242 aa9.82□□□□□ -0.84
NUP50-214ENST00000469163 TMEM65Q6PI78 240 aa9.82□□□□□ -0.84
NUP50-214ENST00000469163 JAZF1Q86VZ6 243 aa9.82□□□□□ -0.84
NUP50-214ENST00000469163 CARM1Q86X55 608 aa9.82□□□□□ -0.84
NUP50-214ENST00000469163 BHLHE22Q8NFJ8 381 aaPredicted RBP9.82□□□□□ -0.84
NUP50-214ENST00000469163 ZSCAN18Q8TBC5 510 aaPredicted RBP9.82□□□□□ -0.84
NUP50-214ENST00000469163 RAB2BQ8WUD1 216 aa9.82□□□□□ -0.84
NUP50-214ENST00000469163 SLC22A17Q8WUG5 538 aa9.82□□□□□ -0.84
NUP50-214ENST00000469163 ELMO1Q92556 727 aa9.82□□□□□ -0.84
NUP50-214ENST00000469163 FATE1Q969F0 183 aa9.82□□□□□ -0.84
NUP50-214ENST00000469163 SMARCD1Q96GM5 515 aa9.82□□□□□ -0.84
NUP50-214ENST00000469163 MARK4Q96L34 752 aa9.82□□□□□ -0.84
NUP50-214ENST00000469163 HSFY1Q96LI6 401 aa9.82□□□□□ -0.84
NUP50-214ENST00000469163 FOPNLQ96NB1 174 aa9.82□□□□□ -0.84
NUP50-214ENST00000469163 SMOQ99835 787 aa9.82□□□□□ -0.84
NUP50-214ENST00000469163 C19orf43Q9BQ61 176 aa9.82□□□□□ -0.84
NUP50-214ENST00000469163 SMYD2Q9NRG4 433 aa9.82□□□□□ -0.84
NUP50-214ENST00000469163 KIF17Q9P2E2 1029 aa9.82□□□□□ -0.84
NUP50-214ENST00000469163 BAG5Q9UL15 447 aa9.82□□□□□ -0.84
NUP50-214ENST00000469163 COL6A3P12111 3177 aa9.82□□□□□ -0.84
NUP50-214ENST00000469163 SCN4AP35499 1836 aa9.82□□□□□ -0.84
NUP50-214ENST00000469163 CIB4A0PJX0 185 aa9.82□□□□□ -0.84
NUP50-214ENST00000469163 TMEM191CA6NGB0 347 aa9.82□□□□□ -0.84
NUP50-214ENST00000469163 RNF103O00237 685 aa9.82□□□□□ -0.84
NUP50-214ENST00000469163 APOA1P02647 267 aa9.82□□□□□ -0.84
NUP50-214ENST00000469163 AMHP03971 560 aa9.82□□□□□ -0.84
NUP50-214ENST00000469163 MSH3P20585 1137 aa9.82□□□□□ -0.84
NUP50-214ENST00000469163 SIM2Q14190 667 aaPredicted RBP9.82□□□□□ -0.84
NUP50-214ENST00000469163 PIGHQ14442 188 aaPredicted RBP9.82□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms