RNA–Protein interactions for RNA: ENST00000467707.1

GAPVD1-211, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 3

Gene GAPVD1, Length 787 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-211ENST00000467707 DSCR9P59020 149 aa4.88□□□□□ -1.63
GAPVD1-211ENST00000467707 TFCP2Q12800 502 aa4.88□□□□□ -1.63
GAPVD1-211ENST00000467707 RALGDSQ12967 914 aa4.88□□□□□ -1.63
GAPVD1-211ENST00000467707 HSPB3Q12988 150 aa4.88□□□□□ -1.63
GAPVD1-211ENST00000467707 GTF2H2Q13888 395 aa4.88□□□□□ -1.63
GAPVD1-211ENST00000467707 COG2Q14746 738 aa4.88□□□□□ -1.63
GAPVD1-211ENST00000467707 PTPRCAPQ14761 206 aa4.88□□□□□ -1.63
GAPVD1-211ENST00000467707 KIF19Q2TAC6 998 aa4.88□□□□□ -1.63
GAPVD1-211ENST00000467707 GTF2H2CQ6P1K8 395 aa4.88□□□□□ -1.63
GAPVD1-211ENST00000467707 TEX38Q6PEX7 206 aa4.88□□□□□ -1.63
GAPVD1-211ENST00000467707 ASB18Q6ZVZ8 466 aa4.88□□□□□ -1.63
GAPVD1-211ENST00000467707 VSIG1Q86XK7 387 aa4.88□□□□□ -1.63
GAPVD1-211ENST00000467707 TMEM219Q86XT9 240 aa4.88□□□□□ -1.63
GAPVD1-211ENST00000467707 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP4.88□□□□□ -1.63
GAPVD1-211ENST00000467707 MUC20Q8N307 709 aaPredicted RBP4.88□□□□□ -1.63
GAPVD1-211ENST00000467707 OR6J1Q8NGC5 347 aa4.88□□□□□ -1.63
GAPVD1-211ENST00000467707 SLC20A1Q8WUM9 679 aa4.88□□□□□ -1.63
GAPVD1-211ENST00000467707 TEKT4Q8WW24 435 aa4.88□□□□□ -1.63
GAPVD1-211ENST00000467707 NEUROG1Q92886 237 aa4.88□□□□□ -1.63
GAPVD1-211ENST00000467707 MTERF3Q96E29 417 aa4.88□□□□□ -1.63
GAPVD1-211ENST00000467707 SPATA17Q96L03 361 aa4.88□□□□□ -1.63
GAPVD1-211ENST00000467707 DUX5Q96PT3 197 aa4.88□□□□□ -1.63
GAPVD1-211ENST00000467707 ZPBPQ9BS86 351 aa4.88□□□□□ -1.63
GAPVD1-211ENST00000467707 SLC25A23Q9BV35 468 aa4.88□□□□□ -1.63
GAPVD1-211ENST00000467707 GAREM1Q9H706 876 aa4.88□□□□□ -1.63
GAPVD1-211ENST00000467707 EBF2Q9HAK2 575 aa4.88□□□□□ -1.63
GAPVD1-211ENST00000467707 ZCCHC17Q9NP64 241 aaKnown RBP4.88□□□□□ -1.63
GAPVD1-211ENST00000467707 WDR35Q9P2L0 1181 aa4.88□□□□□ -1.63
GAPVD1-211ENST00000467707 TUBE1Q9UJT0 475 aa4.88□□□□□ -1.63
GAPVD1-211ENST00000467707 DLGAP4Q9Y2H0 992 aa4.88□□□□□ -1.63
GAPVD1-211ENST00000467707 A0A0G2JPF8 293 aa4.87□□□□□ -1.63
GAPVD1-211ENST00000467707 SRRM3A6NNA2 597 aaPredicted RBP4.87□□□□□ -1.63
GAPVD1-211ENST00000467707 HNRNPCL3B7ZW38 293 aa4.87□□□□□ -1.63
GAPVD1-211ENST00000467707 GPR137BO60478 399 aa4.87□□□□□ -1.63
GAPVD1-211ENST00000467707 WDR1O75083 606 aa4.87□□□□□ -1.63
GAPVD1-211ENST00000467707 RECQL5O94762 991 aaPredicted RBP4.87□□□□□ -1.63
GAPVD1-211ENST00000467707 BMP10O95393 424 aa4.87□□□□□ -1.63
GAPVD1-211ENST00000467707 HNRNPCL4P0DMR1 293 aa4.87□□□□□ -1.63
GAPVD1-211ENST00000467707 SNHG28P0DPA3 235 aa4.87□□□□□ -1.63
GAPVD1-211ENST00000467707 GM2AP17900 193 aa4.87□□□□□ -1.63
GAPVD1-211ENST00000467707 PCGF2P35227 344 aa4.87□□□□□ -1.63
GAPVD1-211ENST00000467707 AHRP35869 848 aa4.87□□□□□ -1.63
GAPVD1-211ENST00000467707 HTR6P50406 440 aa4.87□□□□□ -1.63
GAPVD1-211ENST00000467707 ART1P52961 327 aa4.87□□□□□ -1.63
GAPVD1-211ENST00000467707 CDH13P55290 713 aa4.87□□□□□ -1.63
GAPVD1-211ENST00000467707 BRWD1-AS2P59051 145 aa4.87□□□□□ -1.63
GAPVD1-211ENST00000467707 SLC20A2Q08357 652 aa4.87□□□□□ -1.63
GAPVD1-211ENST00000467707 SLC39A14Q15043 492 aa4.87□□□□□ -1.63
GAPVD1-211ENST00000467707 SF3B4Q15427 424 aaKnown RBP eCLIP4.87□□□□□ -1.63
GAPVD1-211ENST00000467707 ALS2CLQ60I27 953 aa4.87□□□□□ -1.63
GAPVD1-211ENST00000467707 FAM198BQ6UWH4 519 aa4.87□□□□□ -1.63
GAPVD1-211ENST00000467707 ANKRD23Q86SG2 305 aa4.87□□□□□ -1.63
GAPVD1-211ENST00000467707 TMPRSS12Q86WS5 348 aa4.87□□□□□ -1.63
GAPVD1-211ENST00000467707 Q8N9P0 234 aaPredicted RBP4.87□□□□□ -1.63
GAPVD1-211ENST00000467707 OR52I2Q8NH67 350 aa4.87□□□□□ -1.63
GAPVD1-211ENST00000467707 LILRB1Q8NHL6 650 aaPredicted RBP4.87□□□□□ -1.63
GAPVD1-211ENST00000467707 BBS10Q8TAM1 723 aa4.87□□□□□ -1.63
GAPVD1-211ENST00000467707 LNX1Q8TBB1 728 aaPredicted RBP4.87□□□□□ -1.63
GAPVD1-211ENST00000467707 MED30Q96HR3 178 aa4.87□□□□□ -1.63
GAPVD1-211ENST00000467707 ABHD8Q96I13 439 aa4.87□□□□□ -1.63
GAPVD1-211ENST00000467707 PRMT6Q96LA8 375 aaPredicted RBP4.87□□□□□ -1.63
GAPVD1-211ENST00000467707 PCYT2Q99447 389 aa4.87□□□□□ -1.63
GAPVD1-211ENST00000467707 SEPHS2Q99611 448 aa4.87□□□□□ -1.63
GAPVD1-211ENST00000467707 SH3GLB2Q9NR46 395 aa4.87□□□□□ -1.63
GAPVD1-211ENST00000467707 DPP3Q9NY33 737 aa4.87□□□□□ -1.63
GAPVD1-211ENST00000467707 POU2F3Q9UKI9 436 aa4.87□□□□□ -1.63
GAPVD1-211ENST00000467707 CGNL1Q0VF96 1302 aa4.87□□□□□ -1.63
GAPVD1-211ENST00000467707 TSPY2A6NKD2 308 aa4.86□□□□□ -1.63
GAPVD1-211ENST00000467707 HNRNPCL2B2RXH8 293 aa4.86□□□□□ -1.63
GAPVD1-211ENST00000467707 ZNF587BE7ETH6 402 aa4.86□□□□□ -1.63
GAPVD1-211ENST00000467707 TMEM178BH3BS89 294 aa4.86□□□□□ -1.63
GAPVD1-211ENST00000467707 EIF3DO15371 548 aaKnown RBP eCLIP4.86□□□□□ -1.63
GAPVD1-211ENST00000467707 LDB3O75112 727 aa4.86□□□□□ -1.63
GAPVD1-211ENST00000467707 PDE9AO76083 593 aa4.86□□□□□ -1.63
GAPVD1-211ENST00000467707 DANCRP0C864 163 aa4.86□□□□□ -1.63
GAPVD1-211ENST00000467707 TSPY3P0CV98 308 aa4.86□□□□□ -1.63
GAPVD1-211ENST00000467707 TSPY8P0CW00 308 aa4.86□□□□□ -1.63
GAPVD1-211ENST00000467707 EEF1B2P24534 225 aaKnown RBP4.86□□□□□ -1.63
GAPVD1-211ENST00000467707 MTHFRP42898 656 aa4.86□□□□□ -1.63
GAPVD1-211ENST00000467707 SLC9A3P48764 834 aa4.86□□□□□ -1.63
GAPVD1-211ENST00000467707 THBS3P49746 956 aa4.86□□□□□ -1.63
GAPVD1-211ENST00000467707 CD81P60033 236 aa4.86□□□□□ -1.63
GAPVD1-211ENST00000467707 ZXDBP98169 803 aa4.86□□□□□ -1.63
GAPVD1-211ENST00000467707 TSPY1Q01534 308 aa4.86□□□□□ -1.63
GAPVD1-211ENST00000467707 RELQ04864 619 aaPredicted RBP4.86□□□□□ -1.63
GAPVD1-211ENST00000467707 GAGE5Q13069 117 aa4.86□□□□□ -1.63
GAPVD1-211ENST00000467707 GAGE6Q13070 117 aa4.86□□□□□ -1.63
GAPVD1-211ENST00000467707 PLA2G7Q13093 441 aa4.86□□□□□ -1.63
GAPVD1-211ENST00000467707 KEAP1Q14145 624 aa4.86□□□□□ -1.63
GAPVD1-211ENST00000467707 KRBOX4Q5JUW0 171 aa4.86□□□□□ -1.63
GAPVD1-211ENST00000467707 FIGLAQ6QHK4 219 aa4.86□□□□□ -1.63
GAPVD1-211ENST00000467707 UNQ6126/PRO20091Q6UXV3 157 aa4.86□□□□□ -1.63
GAPVD1-211ENST00000467707 ERN2Q76MJ5 926 aaKnown RBP4.86□□□□□ -1.63
GAPVD1-211ENST00000467707 ODF3L1Q8IXM7 274 aa4.86□□□□□ -1.63
GAPVD1-211ENST00000467707 SLAMF9Q96A28 289 aa4.86□□□□□ -1.63
GAPVD1-211ENST00000467707 THOC3Q96J01 351 aaKnown RBP4.86□□□□□ -1.63
GAPVD1-211ENST00000467707 FAM81BQ96LP2 452 aa4.86□□□□□ -1.63
GAPVD1-211ENST00000467707 LRRC3BQ96PB8 259 aa4.86□□□□□ -1.63
GAPVD1-211ENST00000467707 SPAG5Q96R06 1193 aa4.86□□□□□ -1.63
GAPVD1-211ENST00000467707 EGFL8Q99944 293 aa4.86□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms