RNA–Protein interactions for RNA: ENST00000467558.5

BRAT1-203, Transcript of BRCA1 associated ATM activator 1, humanhuman

TSL 5

Gene BRAT1, Length 4,440 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-203ENST00000467558 IGSF8Q969P0 613 aa13.61□□□□□ -0.23
BRAT1-203ENST00000467558 TMLHEQ9NVH6 421 aa13.61□□□□□ -0.23
BRAT1-203ENST00000467558 MOCS1Q9NZB8 636 aa13.61□□□□□ -0.23
BRAT1-203ENST00000467558 COPG1Q9Y678 874 aaKnown RBP13.61□□□□□ -0.23
BRAT1-203ENST00000467558 SIX3O95343 332 aaPredicted RBP13.61□□□□□ -0.23
BRAT1-203ENST00000467558 CLDN7O95471 211 aa13.61□□□□□ -0.23
BRAT1-203ENST00000467558 ANXA4P09525 319 aaPredicted RBP13.61□□□□□ -0.23
BRAT1-203ENST00000467558 HSMCR30P0CW71 290 aa13.61□□□□□ -0.23
BRAT1-203ENST00000467558 ZNF30P17039 623 aa13.61□□□□□ -0.23
BRAT1-203ENST00000467558 MANFP55145 182 aaKnown RBP13.61□□□□□ -0.23
BRAT1-203ENST00000467558 RFX4Q33E94 735 aa13.61□□□□□ -0.23
BRAT1-203ENST00000467558 SLC9B1Q4ZJI4 515 aa13.61□□□□□ -0.23
BRAT1-203ENST00000467558 REP15Q6BDI9 236 aa13.61□□□□□ -0.23
BRAT1-203ENST00000467558 KLHL35Q6PF15 583 aa13.61□□□□□ -0.23
BRAT1-203ENST00000467558 PAOXQ6QHF9 649 aa13.61□□□□□ -0.23
BRAT1-203ENST00000467558 VITQ6UXI7 678 aa13.61□□□□□ -0.23
BRAT1-203ENST00000467558 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP13.61□□□□□ -0.23
BRAT1-203ENST00000467558 BPIFB1Q8TDL5 484 aa13.61□□□□□ -0.23
BRAT1-203ENST00000467558 OTUB2Q96DC9 234 aa13.61□□□□□ -0.23
BRAT1-203ENST00000467558 IL12RB2Q99665 862 aa13.61□□□□□ -0.23
BRAT1-203ENST00000467558 ZSCAN5AQ9BUG6 496 aa13.61□□□□□ -0.23
BRAT1-203ENST00000467558 MIR1-1HGQ9H1L0 117 aa13.61□□□□□ -0.23
BRAT1-203ENST00000467558 TRIT1Q9H3H1 467 aaKnown RBP13.61□□□□□ -0.23
BRAT1-203ENST00000467558 R3HDMLQ9H3Y0 253 aa13.61□□□□□ -0.23
BRAT1-203ENST00000467558 ADGRE2Q9UHX3 823 aa13.61□□□□□ -0.23
BRAT1-203ENST00000467558 LCHNA4D1U4 455 aa13.61□□□□□ -0.23
BRAT1-203ENST00000467558 ECI2O75521 394 aa13.61□□□□□ -0.23
BRAT1-203ENST00000467558 SERPINB7O75635 380 aa13.61□□□□□ -0.23
BRAT1-203ENST00000467558 PDE9AO76083 593 aa13.61□□□□□ -0.23
BRAT1-203ENST00000467558 CST5P28325 142 aaPredicted RBP13.61□□□□□ -0.23
BRAT1-203ENST00000467558 TTKP33981 857 aa13.61□□□□□ -0.23
BRAT1-203ENST00000467558 SMIM11AP58511 58 aa13.61□□□□□ -0.23
BRAT1-203ENST00000467558 TEAD2Q15562 447 aa13.61□□□□□ -0.23
BRAT1-203ENST00000467558 NEDD8Q15843 81 aa13.61□□□□□ -0.23
BRAT1-203ENST00000467558 C22orf39Q6P5X5 142 aa13.61□□□□□ -0.23
BRAT1-203ENST00000467558 IL36AQ9UHA7 158 aa13.61□□□□□ -0.23
BRAT1-203ENST00000467558 SAMD4AQ9UPU9 718 aaKnown RBP13.61□□□□□ -0.23
BRAT1-203ENST00000467558 WNT6Q9Y6F9 365 aa13.61□□□□□ -0.23
BRAT1-203ENST00000467558 SUV39H1O43463 412 aa13.61□□□□□ -0.23
BRAT1-203ENST00000467558 PI15O43692 258 aa13.61□□□□□ -0.23
BRAT1-203ENST00000467558 MGRN1O60291 552 aa13.61□□□□□ -0.23
BRAT1-203ENST00000467558 ZNHIT3Q15649 155 aaPredicted RBP13.61□□□□□ -0.23
BRAT1-203ENST00000467558 PIK3R6Q5UE93 754 aa13.61□□□□□ -0.23
BRAT1-203ENST00000467558 ERICH5Q6P6B1 374 aa13.61□□□□□ -0.23
BRAT1-203ENST00000467558 SLC39A5Q6ZMH5 540 aa13.61□□□□□ -0.23
BRAT1-203ENST00000467558 GRASPQ7Z6J2 395 aaPredicted RBP13.61□□□□□ -0.23
BRAT1-203ENST00000467558 ZNF605Q86T29 641 aa13.61□□□□□ -0.23
BRAT1-203ENST00000467558 OR10G6Q8NH81 332 aa13.61□□□□□ -0.23
BRAT1-203ENST00000467558 HERVK_113Q902F9 699 aa13.61□□□□□ -0.23
BRAT1-203ENST00000467558 ZDHHC4Q9NPG8 344 aa13.61□□□□□ -0.23
BRAT1-203ENST00000467558 SOHLH2Q9NX45 425 aa13.61□□□□□ -0.23
BRAT1-203ENST00000467558 COLEC10Q9Y6Z7 277 aa13.61□□□□□ -0.23
BRAT1-203ENST00000467558 LRRC72A6NJI9 287 aa13.6□□□□□ -0.23
BRAT1-203ENST00000467558 F7P08709 466 aaPredicted RBP13.6□□□□□ -0.23
BRAT1-203ENST00000467558 AP1S2P56377 157 aa13.6□□□□□ -0.23
BRAT1-203ENST00000467558 TRIM25Q14258 630 aaKnown RBP13.6□□□□□ -0.23
BRAT1-203ENST00000467558 CCNYL2Q5T2Q4 361 aa13.6□□□□□ -0.23
BRAT1-203ENST00000467558 SAMHD1Q9Y3Z3 626 aaKnown RBP13.6□□□□□ -0.23
BRAT1-203ENST00000467558 COL4A1P02462 1669 aa13.6□□□□□ -0.23
BRAT1-203ENST00000467558 ITGB1P05556 798 aa13.6□□□□□ -0.23
BRAT1-203ENST00000467558 SOX6P35712 828 aa13.6□□□□□ -0.23
BRAT1-203ENST00000467558 IDH2P48735 452 aaKnown RBP13.6□□□□□ -0.23
BRAT1-203ENST00000467558 ERVK-8P63133 956 aa13.6□□□□□ -0.23
BRAT1-203ENST00000467558 LIPEQ05469 1076 aa13.6□□□□□ -0.23
BRAT1-203ENST00000467558 ZIK1Q3SY52 487 aaPredicted RBP13.6□□□□□ -0.23
BRAT1-203ENST00000467558 LY6G5CQ5SRR4 150 aa13.6□□□□□ -0.23
BRAT1-203ENST00000467558 PPP4R4Q6NUP7 873 aa13.6□□□□□ -0.23
BRAT1-203ENST00000467558 ABRAXAS1Q6UWZ7 409 aa13.6□□□□□ -0.23
BRAT1-203ENST00000467558 ZDHHC14Q8IZN3 488 aa13.6□□□□□ -0.23
BRAT1-203ENST00000467558 PHF10Q8WUB8 498 aaKnown RBP13.6□□□□□ -0.23
BRAT1-203ENST00000467558 C8orf4Q9NR00 106 aa13.6□□□□□ -0.23
BRAT1-203ENST00000467558 SIRPGQ9P1W8 387 aa13.6□□□□□ -0.23
BRAT1-203ENST00000467558 AP4B1Q9Y6B7 739 aa13.6□□□□□ -0.23
BRAT1-203ENST00000467558 SOCS5O75159 536 aa13.6□□□□□ -0.23
BRAT1-203ENST00000467558 VEGFBP49765 207 aa13.6□□□□□ -0.23
BRAT1-203ENST00000467558 CYP4F2P78329 520 aa13.6□□□□□ -0.23
BRAT1-203ENST00000467558 TOP3AQ13472 1001 aaPredicted RBP13.6□□□□□ -0.23
BRAT1-203ENST00000467558 PLEKHG4Q58EX7 1191 aa13.6□□□□□ -0.23
BRAT1-203ENST00000467558 CLLU1OSQ5K130 101 aa13.6□□□□□ -0.23
BRAT1-203ENST00000467558 C16orf62Q7Z3J2 963 aa13.6□□□□□ -0.23
BRAT1-203ENST00000467558 CLVS1Q8IUQ0 354 aaPredicted RBP13.6□□□□□ -0.23
BRAT1-203ENST00000467558 OFCC1Q8IZS5 231 aa13.6□□□□□ -0.23
BRAT1-203ENST00000467558 KLHL23Q8NBE8 558 aa13.6□□□□□ -0.23
BRAT1-203ENST00000467558 OR4A15Q8NGL6 344 aa13.6□□□□□ -0.23
BRAT1-203ENST00000467558 ZFYVE19Q96K21 471 aa13.6□□□□□ -0.23
BRAT1-203ENST00000467558 MRGPRX2Q96LB1 330 aa13.6□□□□□ -0.23
BRAT1-203ENST00000467558 ZNF607Q96SK3 696 aa13.6□□□□□ -0.23
BRAT1-203ENST00000467558 TDRD1Q9BXT4 1180 aaKnown RBP13.6□□□□□ -0.23
BRAT1-203ENST00000467558 OR2AG1Q9H205 316 aa13.6□□□□□ -0.23
BRAT1-203ENST00000467558 SLC9A8Q9Y2E8 581 aa13.6□□□□□ -0.23
BRAT1-203ENST00000467558 PIPSLA2A3N6 862 aa13.59□□□□□ -0.23
BRAT1-203ENST00000467558 STC2O76061 302 aa13.59□□□□□ -0.23
BRAT1-203ENST00000467558 NOS3P29474 1203 aa13.59□□□□□ -0.23
BRAT1-203ENST00000467558 CENPAP49450 140 aa13.59□□□□□ -0.23
BRAT1-203ENST00000467558 HNMTP50135 292 aa13.59□□□□□ -0.23
BRAT1-203ENST00000467558 FOLH1Q04609 750 aa13.59□□□□□ -0.23
BRAT1-203ENST00000467558 PITRM1Q5JRX3 1037 aa13.59□□□□□ -0.23
BRAT1-203ENST00000467558 PIM3Q86V86 326 aa13.59□□□□□ -0.23
BRAT1-203ENST00000467558 AMZ2Q86W34 360 aa13.59□□□□□ -0.23
BRAT1-203ENST00000467558 SPPL2CQ8IUH8 684 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms