RNA–Protein interactions for RNA: ENST00000467326.5

VPS50-209, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 4

Gene VPS50, Length 574 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-209ENST00000467326 LRRD1A4D1F6 860 aa3.7□□□□□ -1.82
VPS50-209ENST00000467326 C2orf81A6NN90 581 aa3.7□□□□□ -1.82
VPS50-209ENST00000467326 HNRNPCL3B7ZW38 293 aa3.7□□□□□ -1.82
VPS50-209ENST00000467326 ZNF263O14978 683 aa3.7□□□□□ -1.82
VPS50-209ENST00000467326 LINC01565O15544 149 aa3.7□□□□□ -1.82
VPS50-209ENST00000467326 SEC14L5O43304 696 aa3.7□□□□□ -1.82
VPS50-209ENST00000467326 ADAM20O43506 726 aa3.7□□□□□ -1.82
VPS50-209ENST00000467326 HNRNPCL1O60812 293 aaKnown RBP3.7□□□□□ -1.82
VPS50-209ENST00000467326 SOCS5O75159 536 aa3.7□□□□□ -1.82
VPS50-209ENST00000467326 TPPPO94811 219 aa3.7□□□□□ -1.82
VPS50-209ENST00000467326 OPN1MWP04001 364 aa3.7□□□□□ -1.82
VPS50-209ENST00000467326 UMODP07911 640 aa3.7□□□□□ -1.82
VPS50-209ENST00000467326 HNRNPCL4P0DMR1 293 aa3.7□□□□□ -1.82
VPS50-209ENST00000467326 OPN1MW2P0DN77 364 aa3.7□□□□□ -1.82
VPS50-209ENST00000467326 OPN1MW3P0DN78 364 aa3.7□□□□□ -1.82
VPS50-209ENST00000467326 FDPSP14324 419 aaKnown RBP3.7□□□□□ -1.82
VPS50-209ENST00000467326 EPHA8P29322 1005 aaPredicted RBP3.7□□□□□ -1.82
VPS50-209ENST00000467326 TM4SF1P30408 202 aa3.7□□□□□ -1.82
VPS50-209ENST00000467326 MATR3P43243 847 aaKnown RBP eCLIP3.7□□□□□ -1.82
VPS50-209ENST00000467326 NT5C2P49902 561 aa3.7□□□□□ -1.82
VPS50-209ENST00000467326 GNAQP50148 359 aa3.7□□□□□ -1.82
VPS50-209ENST00000467326 METAP2P50579 478 aaKnown RBP eCLIP3.7□□□□□ -1.82
VPS50-209ENST00000467326 GPC3P51654 580 aa3.7□□□□□ -1.82
VPS50-209ENST00000467326 SLC26A5P58743 744 aa3.7□□□□□ -1.82
VPS50-209ENST00000467326 SORDQ00796 357 aa3.7□□□□□ -1.82
VPS50-209ENST00000467326 GOLGA8DPQ0D2H9 430 aa3.7□□□□□ -1.82
VPS50-209ENST00000467326 TROAPQ12815 778 aa3.7□□□□□ -1.82
VPS50-209ENST00000467326 RALGDSQ12967 914 aa3.7□□□□□ -1.82
VPS50-209ENST00000467326 NAE1Q13564 534 aa3.7□□□□□ -1.82
VPS50-209ENST00000467326 NFE2L1Q14494 772 aa3.7□□□□□ -1.82
VPS50-209ENST00000467326 ZNF628Q5EBL2 1059 aa3.7□□□□□ -1.82
VPS50-209ENST00000467326 ERMARDQ5T6L9 678 aa3.7□□□□□ -1.82
VPS50-209ENST00000467326 ADALQ6DHV7 355 aa3.7□□□□□ -1.82
VPS50-209ENST00000467326 HIST2H2BCQ6DN03 193 aa3.7□□□□□ -1.82
VPS50-209ENST00000467326 HIST2H2BDQ6DRA6 164 aa3.7□□□□□ -1.82
VPS50-209ENST00000467326 RGMBQ6NW40 437 aa3.7□□□□□ -1.82
VPS50-209ENST00000467326 PLEKHM3Q6ZWE6 761 aa3.7□□□□□ -1.82
VPS50-209ENST00000467326 ZNF329Q86UD4 541 aa3.7□□□□□ -1.82
VPS50-209ENST00000467326 TUSC5Q8IXB3 177 aa3.7□□□□□ -1.82
VPS50-209ENST00000467326 ADGRF2Q8IZF7 708 aa3.7□□□□□ -1.82
VPS50-209ENST00000467326 HDDC3Q8N4P3 179 aa3.7□□□□□ -1.82
VPS50-209ENST00000467326 KCNH5Q8NCM2 988 aa3.7□□□□□ -1.82
VPS50-209ENST00000467326 ZBTB44Q8NCP5 570 aa3.7□□□□□ -1.82
VPS50-209ENST00000467326 OR2AK2Q8NG84 335 aa3.7□□□□□ -1.82
VPS50-209ENST00000467326 OR52K2Q8NGK3 314 aa3.7□□□□□ -1.82
VPS50-209ENST00000467326 PSMA8Q8TAA3 256 aa3.7□□□□□ -1.82
VPS50-209ENST00000467326 SAAL1Q96ER3 474 aa3.7□□□□□ -1.82
VPS50-209ENST00000467326 HES6Q96HZ4 224 aa3.7□□□□□ -1.82
VPS50-209ENST00000467326 INPP4AQ96PE3 977 aaPredicted RBP3.7□□□□□ -1.82
VPS50-209ENST00000467326 FAM110AQ9BQ89 295 aa3.7□□□□□ -1.82
VPS50-209ENST00000467326 TCHPQ9BT92 498 aa3.7□□□□□ -1.82
VPS50-209ENST00000467326 IFIH1Q9BYX4 1025 aaKnown RBP3.7□□□□□ -1.82
VPS50-209ENST00000467326 KRT23Q9C075 422 aa3.7□□□□□ -1.82
VPS50-209ENST00000467326 OPA3Q9H6K4 179 aa3.7□□□□□ -1.82
VPS50-209ENST00000467326 SH2D4AQ9H788 454 aa3.7□□□□□ -1.82
VPS50-209ENST00000467326 KAT14Q9H8E8 782 aa3.7□□□□□ -1.82
VPS50-209ENST00000467326 LIN28AQ9H9Z2 209 aaKnown RBP3.7□□□□□ -1.82
VPS50-209ENST00000467326 HINT3Q9NQE9 182 aaKnown RBP3.7□□□□□ -1.82
VPS50-209ENST00000467326 DDX43Q9NXZ2 648 aaKnown RBP3.7□□□□□ -1.82
VPS50-209ENST00000467326 LAMP5Q9UJQ1 280 aa3.7□□□□□ -1.82
VPS50-209ENST00000467326 KCNS2Q9ULS6 477 aa3.7□□□□□ -1.82
VPS50-209ENST00000467326 hCG_1809904A0A1W2PP81 198 aa3.69□□□□□ -1.82
VPS50-209ENST00000467326 A0A1W2PPE2 198 aa3.69□□□□□ -1.82
VPS50-209ENST00000467326 A0A1W2PR64 198 aa3.69□□□□□ -1.82
VPS50-209ENST00000467326 CLRN2A0PK11 232 aa3.69□□□□□ -1.82
VPS50-209ENST00000467326 ARHGEF37A1IGU5 675 aa3.69□□□□□ -1.82
VPS50-209ENST00000467326 GOLGA6L9A6NEM1 432 aa3.69□□□□□ -1.82
VPS50-209ENST00000467326 LRRC53A6NM62 1247 aa3.69□□□□□ -1.82
VPS50-209ENST00000467326 AKR1B15C9JRZ8 316 aaPredicted RBP3.69□□□□□ -1.82
VPS50-209ENST00000467326 USP17L23D6RBM5 183 aa3.69□□□□□ -1.82
VPS50-209ENST00000467326 PSMD14O00487 310 aa3.69□□□□□ -1.82
VPS50-209ENST00000467326 KINO60870 393 aaKnown RBP3.69□□□□□ -1.82
VPS50-209ENST00000467326 CDH2P19022 906 aaPredicted RBP3.69□□□□□ -1.82
VPS50-209ENST00000467326 CDAP32320 146 aa3.69□□□□□ -1.82
VPS50-209ENST00000467326 CPOXP36551 454 aa3.69□□□□□ -1.82
VPS50-209ENST00000467326 TRPC1P48995 793 aa3.69□□□□□ -1.82
VPS50-209ENST00000467326 HSD17B4P51659 736 aa3.69□□□□□ -1.82
VPS50-209ENST00000467326 MRPL12P52815 198 aaKnown RBP3.69□□□□□ -1.82
VPS50-209ENST00000467326 EIF3BP55884 814 aaKnown RBP3.69□□□□□ -1.82
VPS50-209ENST00000467326 RPL7AP62424 266 aaKnown RBP3.69□□□□□ -1.82
VPS50-209ENST00000467326 HTD2P86397 168 aa3.69□□□□□ -1.82
VPS50-209ENST00000467326 ACSM2AQ08AH3 577 aa3.69□□□□□ -1.82
VPS50-209ENST00000467326 RPA4Q13156 261 aa3.69□□□□□ -1.82
VPS50-209ENST00000467326 CAMK2DQ13557 499 aa3.69□□□□□ -1.82
VPS50-209ENST00000467326 FGFBP1Q14512 234 aa3.69□□□□□ -1.82
VPS50-209ENST00000467326 LASP1Q14847 261 aaKnown RBP3.69□□□□□ -1.82
VPS50-209ENST00000467326 ZKSCAN8Q15776 578 aaPredicted RBP3.69□□□□□ -1.82
VPS50-209ENST00000467326 C2orf68Q2NKX9 166 aa3.69□□□□□ -1.82
VPS50-209ENST00000467326 KRTAP27-1Q3LI81 207 aa3.69□□□□□ -1.82
VPS50-209ENST00000467326 CEP55Q53EZ4 464 aa3.69□□□□□ -1.82
VPS50-209ENST00000467326 ZNF805Q5CZA5 627 aa3.69□□□□□ -1.82
VPS50-209ENST00000467326 GLRA4Q5JXX5 417 aa3.69□□□□□ -1.82
VPS50-209ENST00000467326 GGNBP1Q5YKI7 109 aa3.69□□□□□ -1.82
VPS50-209ENST00000467326 CAVIN1Q6NZI2 390 aaKnown RBP3.69□□□□□ -1.82
VPS50-209ENST00000467326 METTL2BQ6P1Q9 378 aaKnown RBP3.69□□□□□ -1.82
VPS50-209ENST00000467326 MSANTD1Q6ZTZ1 278 aa3.69□□□□□ -1.82
VPS50-209ENST00000467326 C9orf139Q6ZV77 190 aa3.69□□□□□ -1.82
VPS50-209ENST00000467326 GLRX5Q86SX6 157 aa3.69□□□□□ -1.82
VPS50-209ENST00000467326 ODF3L1Q8IXM7 274 aa3.69□□□□□ -1.82
VPS50-209ENST00000467326 PEX5LQ8IYB4 626 aa3.69□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms