RNA–Protein interactions for RNA: ENST00000466538.1

CDC42BPA-211, Transcript of CDC42 binding protein kinase alpha, human

TSL 3

Gene CDC42BPA, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDC42BPA-211	ENST00000466538	ZCWPW2	A0A1B0GU75	182 aa		4.22	□□□□□ -1.73
CDC42BPA-211	ENST00000466538	FAM170A	A1A519	330 aa		4.22	□□□□□ -1.73
CDC42BPA-211	ENST00000466538	OR5K3	A6NET4	321 aa		4.22	□□□□□ -1.73
CDC42BPA-211	ENST00000466538	PLK4	O00444	970 aa		4.22	□□□□□ -1.73
CDC42BPA-211	ENST00000466538	WDR46	O15213	610 aa	Known RBP	4.22	□□□□□ -1.73
CDC42BPA-211	ENST00000466538	ZNHIT1	O43257	154 aa		4.22	□□□□□ -1.73
CDC42BPA-211	ENST00000466538	ACAA1	P09110	424 aa	Predicted RBP	4.22	□□□□□ -1.73
CDC42BPA-211	ENST00000466538	FAM106CP	P0CH98	169 aa		4.22	□□□□□ -1.73
CDC42BPA-211	ENST00000466538	MYOD1	P15172	320 aa		4.22	□□□□□ -1.73
CDC42BPA-211	ENST00000466538	IFNAR1	P17181	557 aa		4.22	□□□□□ -1.73
CDC42BPA-211	ENST00000466538	GM2A	P17900	193 aa		4.22	□□□□□ -1.73
CDC42BPA-211	ENST00000466538	POLR2C	P19387	275 aa	Predicted RBP	4.22	□□□□□ -1.73
CDC42BPA-211	ENST00000466538	PTAFR	P25105	342 aa		4.22	□□□□□ -1.73
CDC42BPA-211	ENST00000466538	MC5R	P33032	325 aa		4.22	□□□□□ -1.73
CDC42BPA-211	ENST00000466538	MTHFR	P42898	656 aa		4.22	□□□□□ -1.73
CDC42BPA-211	ENST00000466538	SLC9A3	P48764	834 aa		4.22	□□□□□ -1.73
CDC42BPA-211	ENST00000466538	LIMK1	P53667	647 aa		4.22	□□□□□ -1.73
CDC42BPA-211	ENST00000466538	BRWD1-AS2	P59051	145 aa		4.22	□□□□□ -1.73
CDC42BPA-211	ENST00000466538	CD81	P60033	236 aa		4.22	□□□□□ -1.73
CDC42BPA-211	ENST00000466538	COG7	P83436	770 aa		4.22	□□□□□ -1.73
CDC42BPA-211	ENST00000466538	GTF2H2	Q13888	395 aa		4.22	□□□□□ -1.73
CDC42BPA-211	ENST00000466538	TNIP1	Q15025	636 aa		4.22	□□□□□ -1.73
CDC42BPA-211	ENST00000466538	C6orf163	Q5TEZ5	329 aa		4.22	□□□□□ -1.73
CDC42BPA-211	ENST00000466538	ALS2CL	Q60I27	953 aa		4.22	□□□□□ -1.73
CDC42BPA-211	ENST00000466538	PLA2G4F	Q68DD2	849 aa		4.22	□□□□□ -1.73
CDC42BPA-211	ENST00000466538	GTF2H2C	Q6P1K8	395 aa		4.22	□□□□□ -1.73
CDC42BPA-211	ENST00000466538	GFRAL	Q6UXV0	394 aa		4.22	□□□□□ -1.73
CDC42BPA-211	ENST00000466538	ASB18	Q6ZVZ8	466 aa		4.22	□□□□□ -1.73
CDC42BPA-211	ENST00000466538	TMPRSS12	Q86WS5	348 aa		4.22	□□□□□ -1.73
CDC42BPA-211	ENST00000466538	KMT5C	Q86Y97	462 aa		4.22	□□□□□ -1.73
CDC42BPA-211	ENST00000466538	PI4KAP1	Q8N8J0	262 aa		4.22	□□□□□ -1.73
CDC42BPA-211	ENST00000466538	SCARB1	Q8WTV0	552 aa		4.22	□□□□□ -1.73
CDC42BPA-211	ENST00000466538	SLC20A1	Q8WUM9	679 aa		4.22	□□□□□ -1.73
CDC42BPA-211	ENST00000466538	TMEM255B	Q8WV15	326 aa		4.22	□□□□□ -1.73
CDC42BPA-211	ENST00000466538	SMPDL3B	Q92485	455 aa		4.22	□□□□□ -1.73
CDC42BPA-211	ENST00000466538	FIG4	Q92562	907 aa		4.22	□□□□□ -1.73
CDC42BPA-211	ENST00000466538	PHF21A	Q96BD5	680 aa		4.22	□□□□□ -1.73
CDC42BPA-211	ENST00000466538	RTP4	Q96DX8	246 aa		4.22	□□□□□ -1.73
CDC42BPA-211	ENST00000466538	BICD1	Q96G01	975 aa		4.22	□□□□□ -1.73
CDC42BPA-211	ENST00000466538	FAM84B	Q96KN1	310 aa	Predicted RBP	4.22	□□□□□ -1.73
CDC42BPA-211	ENST00000466538	FAM81B	Q96LP2	452 aa		4.22	□□□□□ -1.73
CDC42BPA-211	ENST00000466538	SPAG5	Q96R06	1193 aa		4.22	□□□□□ -1.73
CDC42BPA-211	ENST00000466538	SLX1A	Q9BQ83	275 aa		4.22	□□□□□ -1.73
CDC42BPA-211	ENST00000466538	ADPGK	Q9BRR6	497 aa		4.22	□□□□□ -1.73
CDC42BPA-211	ENST00000466538	C16orf70	Q9BSU1	422 aa		4.22	□□□□□ -1.73
CDC42BPA-211	ENST00000466538	SYT17	Q9BSW7	474 aa		4.22	□□□□□ -1.73
CDC42BPA-211	ENST00000466538	TM6SF1	Q9BZW5	370 aa		4.22	□□□□□ -1.73
CDC42BPA-211	ENST00000466538	ANKRD2	Q9GZV1	360 aa		4.22	□□□□□ -1.73
CDC42BPA-211	ENST00000466538	OPA3	Q9H6K4	179 aa		4.22	□□□□□ -1.73
CDC42BPA-211	ENST00000466538	ZWILCH	Q9H900	591 aa		4.22	□□□□□ -1.73
CDC42BPA-211	ENST00000466538	FKRP	Q9H9S5	495 aa		4.22	□□□□□ -1.73
CDC42BPA-211	ENST00000466538	ANAPC5	Q9UJX4	755 aa		4.22	□□□□□ -1.73
CDC42BPA-211	ENST00000466538	GRIP1	Q9Y3R0	1128 aa		4.22	□□□□□ -1.73
CDC42BPA-211	ENST00000466538	CGNL1	Q0VF96	1302 aa		4.21	□□□□□ -1.73
CDC42BPA-211	ENST00000466538		A0A0B4J293	547 aa		4.21	□□□□□ -1.74
CDC42BPA-211	ENST00000466538	ANKUB1	A6NFN9	424 aa		4.21	□□□□□ -1.74
CDC42BPA-211	ENST00000466538	SRRM3	A6NNA2	597 aa	Predicted RBP	4.21	□□□□□ -1.74
CDC42BPA-211	ENST00000466538	ZNF587B	E7ETH6	402 aa		4.21	□□□□□ -1.74
CDC42BPA-211	ENST00000466538	SPRY1	O43609	319 aa	Predicted RBP	4.21	□□□□□ -1.74
CDC42BPA-211	ENST00000466538	GPR137B	O60478	399 aa		4.21	□□□□□ -1.74
CDC42BPA-211	ENST00000466538	BMP10	O95393	424 aa		4.21	□□□□□ -1.74
CDC42BPA-211	ENST00000466538	C22orf31	O95567	290 aa		4.21	□□□□□ -1.74
CDC42BPA-211	ENST00000466538	GLUL	P15104	373 aa		4.21	□□□□□ -1.74
CDC42BPA-211	ENST00000466538	ACHE	P22303	614 aa		4.21	□□□□□ -1.74
CDC42BPA-211	ENST00000466538	EEF1B2	P24534	225 aa	Known RBP	4.21	□□□□□ -1.74
CDC42BPA-211	ENST00000466538	CDKN2A	P42771	156 aa	Known RBP	4.21	□□□□□ -1.74
CDC42BPA-211	ENST00000466538	ARCN1	P48444	511 aa	Known RBP	4.21	□□□□□ -1.74
CDC42BPA-211	ENST00000466538	AMPH	P49418	695 aa		4.21	□□□□□ -1.74
CDC42BPA-211	ENST00000466538	TERF1	P54274	439 aa		4.21	□□□□□ -1.74
CDC42BPA-211	ENST00000466538	MLLT10	P55197	1068 aa		4.21	□□□□□ -1.74
CDC42BPA-211	ENST00000466538	LINC00205	P59089	165 aa		4.21	□□□□□ -1.74
CDC42BPA-211	ENST00000466538	PLIN5	Q00G26	463 aa		4.21	□□□□□ -1.74
CDC42BPA-211	ENST00000466538	RBPJ	Q06330	500 aa		4.21	□□□□□ -1.74
CDC42BPA-211	ENST00000466538	SLC20A2	Q08357	652 aa		4.21	□□□□□ -1.74
CDC42BPA-211	ENST00000466538	CAMK2D	Q13557	499 aa		4.21	□□□□□ -1.74
CDC42BPA-211	ENST00000466538	HYAL4	Q2M3T9	481 aa		4.21	□□□□□ -1.74
CDC42BPA-211	ENST00000466538	KIF19	Q2TAC6	998 aa		4.21	□□□□□ -1.74
CDC42BPA-211	ENST00000466538	KRBOX4	Q5JUW0	171 aa		4.21	□□□□□ -1.74
CDC42BPA-211	ENST00000466538	RNASEH2B	Q5TBB1	312 aa	Known RBP	4.21	□□□□□ -1.74
CDC42BPA-211	ENST00000466538	GALNTL5	Q7Z4T8	443 aa		4.21	□□□□□ -1.74
CDC42BPA-211	ENST00000466538	METTL23	Q86XA0	190 aa		4.21	□□□□□ -1.74
CDC42BPA-211	ENST00000466538	TMEM219	Q86XT9	240 aa		4.21	□□□□□ -1.74
CDC42BPA-211	ENST00000466538	MFN1	Q8IWA4	741 aa		4.21	□□□□□ -1.74
CDC42BPA-211	ENST00000466538	SUPV3L1	Q8IYB8	786 aa	Known RBP eCLIP	4.21	□□□□□ -1.74
CDC42BPA-211	ENST00000466538	THNSL1	Q8IYQ7	743 aa		4.21	□□□□□ -1.74
CDC42BPA-211	ENST00000466538	MUC20	Q8N307	709 aa	Predicted RBP	4.21	□□□□□ -1.74
CDC42BPA-211	ENST00000466538	ZBTB8B	Q8NAP8	495 aa	Predicted RBP	4.21	□□□□□ -1.74
CDC42BPA-211	ENST00000466538	PPFIBP2	Q8ND30	876 aa		4.21	□□□□□ -1.74
CDC42BPA-211	ENST00000466538		Q8NFD4	153 aa		4.21	□□□□□ -1.74
CDC42BPA-211	ENST00000466538	OR52I2	Q8NH67	350 aa		4.21	□□□□□ -1.74
CDC42BPA-211	ENST00000466538	KIF18A	Q8NI77	898 aa		4.21	□□□□□ -1.74
CDC42BPA-211	ENST00000466538	SLC38A5	Q8WUX1	472 aa		4.21	□□□□□ -1.74
CDC42BPA-211	ENST00000466538	NXNL1	Q96CM4	212 aa		4.21	□□□□□ -1.74
CDC42BPA-211	ENST00000466538	MTERF3	Q96E29	417 aa		4.21	□□□□□ -1.74
CDC42BPA-211	ENST00000466538	LINC00615	Q96LM1	132 aa	Predicted RBP	4.21	□□□□□ -1.74
CDC42BPA-211	ENST00000466538	FER1L6-AS2	Q96M78	137 aa		4.21	□□□□□ -1.74
CDC42BPA-211	ENST00000466538	GBP5	Q96PP8	586 aa		4.21	□□□□□ -1.74
CDC42BPA-211	ENST00000466538	SEPHS2	Q99611	448 aa		4.21	□□□□□ -1.74
CDC42BPA-211	ENST00000466538	ABHD6	Q9BV23	337 aa		4.21	□□□□□ -1.74
CDC42BPA-211	ENST00000466538	KRTAP4-11	Q9BYQ6	195 aa		4.21	□□□□□ -1.74

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