RNA–Protein interactions for RNA: ENST00000465727.5

SDF4-205, Transcript of stromal cell derived factor 4, humanhuman

TSL 2

Gene SDF4, Length 2,095 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-205ENST00000465727 TMEM30AQ9NV96 361 aa19.48■□□□□ 0.71
SDF4-205ENST00000465727 KLQ9UEF7 1012 aa19.48■□□□□ 0.71
SDF4-205ENST00000465727 VPS51Q9UID3 782 aa19.48■□□□□ 0.71
SDF4-205ENST00000465727 LCHNA4D1U4 455 aa19.48■□□□□ 0.71
SDF4-205ENST00000465727 TAF4O00268 1085 aa19.48■□□□□ 0.71
SDF4-205ENST00000465727 BCKDKO14874 412 aa19.48■□□□□ 0.71
SDF4-205ENST00000465727 LDB2O43679 373 aa19.48■□□□□ 0.71
SDF4-205ENST00000465727 KLK8O60259 260 aa19.48■□□□□ 0.71
SDF4-205ENST00000465727 CCR1P32246 355 aa19.48■□□□□ 0.71
SDF4-205ENST00000465727 CD86P42081 329 aa19.48■□□□□ 0.71
SDF4-205ENST00000465727 VBP1P61758 197 aa19.48■□□□□ 0.71
SDF4-205ENST00000465727 VGLL4Q14135 290 aa19.48■□□□□ 0.71
SDF4-205ENST00000465727 SELPLGQ14242 412 aa19.48■□□□□ 0.71
SDF4-205ENST00000465727 HIPK1Q86Z02 1210 aa19.48■□□□□ 0.71
SDF4-205ENST00000465727 MMAAQ8IVH4 418 aaKnown RBP19.48■□□□□ 0.71
SDF4-205ENST00000465727 FAM126BQ8IXS8 530 aa19.48■□□□□ 0.71
SDF4-205ENST00000465727 OR56A4Q8NGH8 313 aa19.48■□□□□ 0.71
SDF4-205ENST00000465727 OR2T11Q8NH01 316 aa19.48■□□□□ 0.71
SDF4-205ENST00000465727 FIG4Q92562 907 aa19.48■□□□□ 0.71
SDF4-205ENST00000465727 HOXD1Q9GZZ0 328 aa19.48■□□□□ 0.71
SDF4-205ENST00000465727 OR51F1A6NGY5 319 aa19.47■□□□□ 0.71
SDF4-205ENST00000465727 ASNA1O43681 348 aa19.47■□□□□ 0.71
SDF4-205ENST00000465727 PAGE1O75459 146 aa19.47■□□□□ 0.71
SDF4-205ENST00000465727 PEX11BO96011 259 aa19.47■□□□□ 0.71
SDF4-205ENST00000465727 MSH3P20585 1137 aa19.47■□□□□ 0.71
SDF4-205ENST00000465727 IST1P53990 364 aa19.47■□□□□ 0.71
SDF4-205ENST00000465727 SF3B4Q15427 424 aaKnown RBP eCLIP19.47■□□□□ 0.718e-8■■■■□ 20.5
SDF4-205ENST00000465727 SLX4IPQ5VYV7 408 aa19.47■□□□□ 0.71
SDF4-205ENST00000465727 ENPP6Q6UWR7 440 aa19.47■□□□□ 0.71
SDF4-205ENST00000465727 CHAC2Q8WUX2 184 aa19.47■□□□□ 0.71
SDF4-205ENST00000465727 OSMRQ99650 979 aa19.47■□□□□ 0.71
SDF4-205ENST00000465727 FAM49AQ9H0Q0 323 aaPredicted RBP19.47■□□□□ 0.71
SDF4-205ENST00000465727 CARS2Q9HA77 564 aaKnown RBP19.47■□□□□ 0.71
SDF4-205ENST00000465727 SIAEQ9HAT2 523 aa19.47■□□□□ 0.71
SDF4-205ENST00000465727 CCNB1IP1Q9NPC3 277 aa19.47■□□□□ 0.71
SDF4-205ENST00000465727 NDFIP2Q9NV92 336 aa19.47■□□□□ 0.71
SDF4-205ENST00000465727 SCN3BQ9NY72 215 aa19.47■□□□□ 0.71
SDF4-205ENST00000465727 LIMD1Q9UGP4 676 aa19.47■□□□□ 0.71
SDF4-205ENST00000465727 ADGRE2Q9UHX3 823 aa19.47■□□□□ 0.71
SDF4-205ENST00000465727 PCTPQ9UKL6 214 aa19.47■□□□□ 0.71
SDF4-205ENST00000465727 CDH9Q9ULB4 789 aa19.47■□□□□ 0.71
SDF4-205ENST00000465727 AP3M1Q9Y2T2 418 aa19.47■□□□□ 0.71
SDF4-205ENST00000465727 PCDHGA10Q9Y5H3 936 aa19.47■□□□□ 0.71
SDF4-205ENST00000465727 GBF1Q92538 1859 aa19.47■□□□□ 0.71
SDF4-205ENST00000465727 MYBPHLA2RUH7 354 aa19.47■□□□□ 0.71
SDF4-205ENST00000465727 RRN3P2A6NIE6 340 aa19.47■□□□□ 0.71
SDF4-205ENST00000465727 WASH4PA8MWX3 477 aa19.47■□□□□ 0.71
SDF4-205ENST00000465727 AXIN1O15169 862 aa19.47■□□□□ 0.71
SDF4-205ENST00000465727 RFPL2O75678 378 aa19.47■□□□□ 0.71
SDF4-205ENST00000465727 SCELO95171 688 aa19.47■□□□□ 0.71
SDF4-205ENST00000465727 DCTP40126 519 aa19.47■□□□□ 0.71
SDF4-205ENST00000465727 SLC35A2P78381 396 aa19.47■□□□□ 0.71
SDF4-205ENST00000465727 FADDQ13158 208 aa19.47■□□□□ 0.71
SDF4-205ENST00000465727 PLA2G4EQ3MJ16 856 aa19.47■□□□□ 0.71
SDF4-205ENST00000465727 TAPT1Q6NXT6 567 aa19.47■□□□□ 0.71
SDF4-205ENST00000465727 LYSMD2Q8IV50 215 aa19.47■□□□□ 0.71
SDF4-205ENST00000465727 FAM86B1Q8N7N1 296 aa19.47■□□□□ 0.71
SDF4-205ENST00000465727 KIAA1958Q8N8K9 716 aa19.47■□□□□ 0.71
SDF4-205ENST00000465727 ARL10Q8N8L6 244 aa19.47■□□□□ 0.71
SDF4-205ENST00000465727 ZNF548Q8NEK5 533 aaPredicted RBP19.47■□□□□ 0.71
SDF4-205ENST00000465727 FBXO30Q8TB52 745 aa19.47■□□□□ 0.71
SDF4-205ENST00000465727 FCRL2Q96LA5 508 aaPredicted RBP19.47■□□□□ 0.71
SDF4-205ENST00000465727 TBATAQ96M53 351 aa19.47■□□□□ 0.71
SDF4-205ENST00000465727 C17orf80Q9BSJ5 609 aa19.47■□□□□ 0.71
SDF4-205ENST00000465727 MROH8Q9H579 483 aa19.47■□□□□ 0.71
SDF4-205ENST00000465727 PCDH12Q9NPG4 1184 aa19.47■□□□□ 0.71
SDF4-205ENST00000465727 OSGIN1Q9UJX0 560 aa19.47■□□□□ 0.71
SDF4-205ENST00000465727 ERVW-1Q9UQF0 538 aa19.47■□□□□ 0.71
SDF4-205ENST00000465727 PIN4Q9Y237 131 aaKnown RBP19.47■□□□□ 0.71
SDF4-205ENST00000465727 MN1Q10571 1320 aaPredicted RBP19.46■□□□□ 0.71
SDF4-205ENST00000465727 PAPPA2Q9BXP8 1791 aa19.46■□□□□ 0.71
SDF4-205ENST00000465727 H0Y626 953 aa19.46■□□□□ 0.71
SDF4-205ENST00000465727 CCL22O00626 93 aa19.46■□□□□ 0.71
SDF4-205ENST00000465727 ECI2O75521 394 aa19.46■□□□□ 0.71
SDF4-205ENST00000465727 TRIM16O95361 564 aa19.46■□□□□ 0.71
SDF4-205ENST00000465727 GOT2P00505 430 aaKnown RBP19.46■□□□□ 0.71
SDF4-205ENST00000465727 TUBA1BP68363 451 aa19.46■□□□□ 0.71
SDF4-205ENST00000465727 IL5RAQ01344 420 aa19.46■□□□□ 0.71
SDF4-205ENST00000465727 NRG1Q02297 640 aaPredicted RBP19.46■□□□□ 0.71
SDF4-205ENST00000465727 RAD51Q06609 339 aa19.46■□□□□ 0.71
SDF4-205ENST00000465727 CLCA4Q14CN2 919 aa19.46■□□□□ 0.71
SDF4-205ENST00000465727 MAPK11Q15759 364 aa19.46■□□□□ 0.71
SDF4-205ENST00000465727 SIRPB2Q5JXA9 342 aa19.46■□□□□ 0.71
SDF4-205ENST00000465727 TMEM236Q5W0B7 351 aa19.46■□□□□ 0.71
SDF4-205ENST00000465727 GPRIN3Q6ZVF9 776 aa19.46■□□□□ 0.71
SDF4-205ENST00000465727 TUBA1AQ71U36 451 aa19.46■□□□□ 0.71
SDF4-205ENST00000465727 DCP2Q8IU60 420 aaKnown RBP19.46■□□□□ 0.71
SDF4-205ENST00000465727 HS3ST5Q8IZT8 346 aa19.46■□□□□ 0.71
SDF4-205ENST00000465727 NAT16Q8N8M0 369 aa19.46■□□□□ 0.71
SDF4-205ENST00000465727 PSMA8Q8TAA3 256 aa19.46■□□□□ 0.71
SDF4-205ENST00000465727 SENP8Q96LD8 212 aa19.46■□□□□ 0.71
SDF4-205ENST00000465727 RNF39Q9H2S5 420 aa19.46■□□□□ 0.71
SDF4-205ENST00000465727 NT5MQ9NPB1 228 aa19.46■□□□□ 0.71
SDF4-205ENST00000465727 ZNF225Q9UK10 706 aa19.46■□□□□ 0.71
SDF4-205ENST00000465727 CLDN24A6NM45 220 aa19.45■□□□□ 0.7
SDF4-205ENST00000465727 SNPHO15079 494 aa19.45■□□□□ 0.7
SDF4-205ENST00000465727 LSM1O15116 133 aaKnown RBP19.45■□□□□ 0.7
SDF4-205ENST00000465727 DYRK3O43781 588 aa19.45■□□□□ 0.7
SDF4-205ENST00000465727 USP2O75604 605 aaPredicted RBP19.45■□□□□ 0.7
SDF4-205ENST00000465727 PTTG1O95997 202 aa19.45■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms