RNA–Protein interactions for RNA: ENST00000465238.5

COL7A1-205, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 2

Gene COL7A1, Length 587 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-205ENST00000465238 KIAA1614Q5VZ46 1190 aa17.44■□□□□ 0.38
COL7A1-205ENST00000465238 ARMC3Q5W041 872 aa17.44■□□□□ 0.38
COL7A1-205ENST00000465238 CASC4Q6P4E1 433 aa17.44■□□□□ 0.38
COL7A1-205ENST00000465238 TAS2R42Q7RTR8 314 aa17.44■□□□□ 0.38
COL7A1-205ENST00000465238 BBOF1Q8ND07 529 aa17.44■□□□□ 0.38
COL7A1-205ENST00000465238 OR6P1Q8NGX9 317 aa17.44■□□□□ 0.38
COL7A1-205ENST00000465238 HDAC10Q969S8 669 aa17.44■□□□□ 0.38
COL7A1-205ENST00000465238 SERPINB12Q96P63 405 aa17.44■□□□□ 0.38
COL7A1-205ENST00000465238 KIFC1Q9BW19 673 aa17.44■□□□□ 0.38
COL7A1-205ENST00000465238 MRM3Q9HC36 420 aaKnown RBP17.44■□□□□ 0.38
COL7A1-205ENST00000465238 WDR70Q9NW82 654 aa17.44■□□□□ 0.38
COL7A1-205ENST00000465238 AKAP7Q9P0M2 348 aaPredicted RBP17.44■□□□□ 0.38
COL7A1-205ENST00000465238 SAMD15Q9P1V8 674 aa17.44■□□□□ 0.38
COL7A1-205ENST00000465238 SLC2A6Q9UGQ3 507 aa17.44■□□□□ 0.38
COL7A1-205ENST00000465238 ANAPC5Q9UJX4 755 aa17.44■□□□□ 0.38
COL7A1-205ENST00000465238 TENM4Q6N022 2769 aa17.44■□□□□ 0.38
COL7A1-205ENST00000465238 CCDC162PA2VCL2 907 aa17.43■□□□□ 0.38
COL7A1-205ENST00000465238 GPR39O43194 453 aa17.43■□□□□ 0.38
COL7A1-205ENST00000465238 GRID2O43424 1007 aa17.43■□□□□ 0.38
COL7A1-205ENST00000465238 B4GAT1O43505 415 aa17.43■□□□□ 0.38
COL7A1-205ENST00000465238 DNAJC6O75061 913 aa17.43■□□□□ 0.38
COL7A1-205ENST00000465238 ZNF8P17098 575 aaPredicted RBP17.43■□□□□ 0.38
COL7A1-205ENST00000465238 ITIH1P19827 911 aa17.43■□□□□ 0.38
COL7A1-205ENST00000465238 MSH3P20585 1137 aa17.43■□□□□ 0.38
COL7A1-205ENST00000465238 AK4P27144 223 aaPredicted RBP17.43■□□□□ 0.38
COL7A1-205ENST00000465238 ALDH4A1P30038 563 aa17.43■□□□□ 0.38
COL7A1-205ENST00000465238 AKT1P31749 480 aa17.43■□□□□ 0.38
COL7A1-205ENST00000465238 GPR3P46089 330 aa17.43■□□□□ 0.38
COL7A1-205ENST00000465238 ARSDP51689 593 aa17.43■□□□□ 0.38
COL7A1-205ENST00000465238 CTBSQ01459 385 aa17.43■□□□□ 0.38
COL7A1-205ENST00000465238 BIRC2Q13490 618 aa17.43■□□□□ 0.38
COL7A1-205ENST00000465238 SLC30A9Q6PML9 568 aa17.43■□□□□ 0.38
COL7A1-205ENST00000465238 TMPRSS9Q7Z410 1059 aa17.43■□□□□ 0.38
COL7A1-205ENST00000465238 NXPE1Q8N323 547 aa17.43■□□□□ 0.38
COL7A1-205ENST00000465238 DDHD1Q8NEL9 900 aa17.43■□□□□ 0.38
COL7A1-205ENST00000465238 OR13J1Q8NGT2 312 aa17.43■□□□□ 0.38
COL7A1-205ENST00000465238 TBRG4Q969Z0 631 aaKnown RBP eCLIP17.43■□□□□ 0.38
COL7A1-205ENST00000465238 MED8Q96G25 268 aa17.43■□□□□ 0.38
COL7A1-205ENST00000465238 ZNF778Q96MU6 729 aa17.43■□□□□ 0.38
COL7A1-205ENST00000465238 ERP44Q9BS26 406 aa17.43■□□□□ 0.38
COL7A1-205ENST00000465238 B3GNT4Q9C0J1 378 aa17.43■□□□□ 0.38
COL7A1-205ENST00000465238 SEMA6CQ9H3T2 930 aa17.43■□□□□ 0.38
COL7A1-205ENST00000465238 RDH14Q9HBH5 336 aa17.43■□□□□ 0.38
COL7A1-205ENST00000465238 SOX13Q9UN79 622 aa17.43■□□□□ 0.38
COL7A1-205ENST00000465238 SNX24Q9Y343 169 aa17.43■□□□□ 0.38
COL7A1-205ENST00000465238 ASH1LQ9NR48 2969 aaKnown RBP17.43■□□□□ 0.38
COL7A1-205ENST00000465238 PRAMEF33A0A0G2JMD5 474 aa17.42■□□□□ 0.38
COL7A1-205ENST00000465238 CTAGE15A4D2H0 777 aa17.42■□□□□ 0.38
COL7A1-205ENST00000465238 AGAP14A8MT82 685 aa17.42■□□□□ 0.38
COL7A1-205ENST00000465238 EFSO43281 561 aa17.42■□□□□ 0.38
COL7A1-205ENST00000465238 PRAMEF10O60809 474 aa17.42■□□□□ 0.38
COL7A1-205ENST00000465238 CTAGE8P0CG41 777 aa17.42■□□□□ 0.38
COL7A1-205ENST00000465238 RALBP11234 206 aa17.42■□□□□ 0.38
COL7A1-205ENST00000465238 NMBRP28336 390 aa17.42■□□□□ 0.38
COL7A1-205ENST00000465238 CA5AP35218 305 aa17.42■□□□□ 0.38
COL7A1-205ENST00000465238 ITGA8P53708 1063 aa17.42■□□□□ 0.38
COL7A1-205ENST00000465238 OR1D5P58170 312 aa17.42■□□□□ 0.38
COL7A1-205ENST00000465238 ACVR1Q04771 509 aa17.42■□□□□ 0.38
COL7A1-205ENST00000465238 LRP8Q14114 963 aa17.42■□□□□ 0.38
COL7A1-205ENST00000465238 TGIF1Q15583 401 aa17.42■□□□□ 0.38
COL7A1-205ENST00000465238 AMZ1Q400G9 498 aa17.42■□□□□ 0.38
COL7A1-205ENST00000465238 KHDC1Q4VXA5 237 aaKnown RBP17.42■□□□□ 0.38
COL7A1-205ENST00000465238 HIBCHQ6NVY1 386 aaPredicted RBP17.42■□□□□ 0.38
COL7A1-205ENST00000465238 AFTPHQ6ULP2 937 aa17.42■□□□□ 0.38
COL7A1-205ENST00000465238 CHST15Q7LFX5 561 aaPredicted RBP17.42■□□□□ 0.38
COL7A1-205ENST00000465238 CTAGE6Q86UF2 777 aa17.42■□□□□ 0.38
COL7A1-205ENST00000465238 LRRTM4Q86VH4 590 aa17.42■□□□□ 0.38
COL7A1-205ENST00000465238 CTAGE4Q8IX94 777 aa17.42■□□□□ 0.38
COL7A1-205ENST00000465238 MPP5Q8N3R9 675 aa17.42■□□□□ 0.38
COL7A1-205ENST00000465238 OR4L1Q8NH43 312 aa17.42■□□□□ 0.38
COL7A1-205ENST00000465238 HEXDCQ8WVB3 486 aa17.42■□□□□ 0.38
COL7A1-205ENST00000465238 DCUN1D1Q96GG9 259 aa17.42■□□□□ 0.38
COL7A1-205ENST00000465238 TTC1Q99614 292 aa17.42■□□□□ 0.38
COL7A1-205ENST00000465238 COPS8Q99627 209 aa17.42■□□□□ 0.38
COL7A1-205ENST00000465238 SEMA4CQ9C0C4 833 aa17.42■□□□□ 0.38
COL7A1-205ENST00000465238 RAB17Q9H0T7 212 aa17.42■□□□□ 0.38
COL7A1-205ENST00000465238 UTP11Q9Y3A2 253 aaKnown RBP17.42■□□□□ 0.38
COL7A1-205ENST00000465238 PRKAB1Q9Y478 270 aa17.42■□□□□ 0.38
COL7A1-205ENST00000465238 ST14Q9Y5Y6 855 aa17.42■□□□□ 0.38
COL7A1-205ENST00000465238 MAD1L1Q9Y6D9 718 aa17.42■□□□□ 0.38
COL7A1-205ENST00000465238 ZFC3H1O60293 1989 aaKnown RBP17.42■□□□□ 0.38
COL7A1-205ENST00000465238 OR51F1A6NGY5 319 aa17.41■□□□□ 0.38
COL7A1-205ENST00000465238 CFAP99D6REC4 459 aa17.41■□□□□ 0.38
COL7A1-205ENST00000465238 HGSO14964 777 aaPredicted RBP17.41■□□□□ 0.38
COL7A1-205ENST00000465238 CHUKO15111 745 aa17.41■□□□□ 0.38
COL7A1-205ENST00000465238 KMOO15229 486 aa17.41■□□□□ 0.38
COL7A1-205ENST00000465238 SEC31AO94979 1220 aaKnown RBP17.41■□□□□ 0.38
COL7A1-205ENST00000465238 GOT2P00505 430 aaKnown RBP17.41■□□□□ 0.38
COL7A1-205ENST00000465238 CD82P27701 267 aa17.41■□□□□ 0.38
COL7A1-205ENST00000465238 ETV5P41161 510 aa17.41■□□□□ 0.38
COL7A1-205ENST00000465238 RPL21P46778 160 aaKnown RBP17.41■□□□□ 0.38
COL7A1-205ENST00000465238 MAPK10P53779 464 aa17.41■□□□□ 0.38
COL7A1-205ENST00000465238 CALCOCO2Q13137 446 aa17.41■□□□□ 0.38
COL7A1-205ENST00000465238 C16orf72Q14CZ0 275 aa17.41■□□□□ 0.38
COL7A1-205ENST00000465238 FASTKD1Q53R41 847 aaKnown RBP17.41■□□□□ 0.38
COL7A1-205ENST00000465238 DNAJC21Q5F1R6 531 aaKnown RBP17.41■□□□□ 0.38
COL7A1-205ENST00000465238 TMEM164Q5U3C3 297 aa17.41■□□□□ 0.38
COL7A1-205ENST00000465238 C8orf74Q6P047 294 aa17.41■□□□□ 0.38
COL7A1-205ENST00000465238 CRTC3Q6UUV7 619 aa17.41■□□□□ 0.38
COL7A1-205ENST00000465238 CES3Q6UWW8 571 aa17.41■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms