RNA–Protein interactions for RNA: ENST00000463477.5

PTPRD-207, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 1 (best) BASIC

Gene PTPRD, Length 1,697 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-207ENST00000463477 TMEM233B4DJY2 109 aa9.78□□□□□ -0.84
PTPRD-207ENST00000463477 UBDO15205 165 aa9.78□□□□□ -0.84
PTPRD-207ENST00000463477 SYNCRIPO60506 623 aaKnown RBP9.78□□□□□ -0.84
PTPRD-207ENST00000463477 BCAS2O75934 225 aaPredicted RBP9.78□□□□□ -0.84
PTPRD-207ENST00000463477 SRPRAP08240 638 aaKnown RBP9.78□□□□□ -0.84
PTPRD-207ENST00000463477 PDHA1P08559 390 aa9.78□□□□□ -0.84
PTPRD-207ENST00000463477 GABRG2P18507 467 aa9.78□□□□□ -0.84
PTPRD-207ENST00000463477 P2RY2P41231 377 aa9.78□□□□□ -0.84
PTPRD-207ENST00000463477 CSKP41240 450 aa9.78□□□□□ -0.84
PTPRD-207ENST00000463477 MRPL19P49406 292 aaKnown RBP9.78□□□□□ -0.84
PTPRD-207ENST00000463477 THOP1P52888 689 aa9.78□□□□□ -0.84
PTPRD-207ENST00000463477 ATP6V0D1P61421 351 aa9.78□□□□□ -0.84
PTPRD-207ENST00000463477 ECT2LQ008S8 904 aa9.78□□□□□ -0.84
PTPRD-207ENST00000463477 SRSF5Q13243 272 aaKnown RBP9.78□□□□□ -0.84
PTPRD-207ENST00000463477 ART3Q13508 389 aa9.78□□□□□ -0.84
PTPRD-207ENST00000463477 CAMK2GQ13555 558 aaPredicted RBP9.78□□□□□ -0.84
PTPRD-207ENST00000463477 PEX6Q13608 980 aa9.78□□□□□ -0.84
PTPRD-207ENST00000463477 STARD3Q14849 445 aa9.78□□□□□ -0.84
PTPRD-207ENST00000463477 UNC50Q53HI1 259 aa9.78□□□□□ -0.84
PTPRD-207ENST00000463477 TCHHL1Q5QJ38 904 aaPredicted RBP9.78□□□□□ -0.84
PTPRD-207ENST00000463477 OGFRL1Q5TC84 451 aaPredicted RBP9.78□□□□□ -0.84
PTPRD-207ENST00000463477 IRAK1BP1Q5VVH5 260 aa9.78□□□□□ -0.84
PTPRD-207ENST00000463477 SERPINA13PQ6UXR4 307 aa9.78□□□□□ -0.84
PTPRD-207ENST00000463477 LARP4Q71RC2 724 aaKnown RBP eCLIP9.78□□□□□ -0.84
PTPRD-207ENST00000463477 CEP68Q76N32 757 aa9.78□□□□□ -0.84
PTPRD-207ENST00000463477 RAB44Q7Z6P3 723 aaPredicted RBP9.78□□□□□ -0.84
PTPRD-207ENST00000463477 C11orf74Q86VG3 221 aa9.78□□□□□ -0.84
PTPRD-207ENST00000463477 APCDD1Q8J025 514 aa9.78□□□□□ -0.84
PTPRD-207ENST00000463477 PIP4K2CQ8TBX8 421 aa9.78□□□□□ -0.84
PTPRD-207ENST00000463477 BLOC1S5Q8TDH9 187 aa9.78□□□□□ -0.84
PTPRD-207ENST00000463477 CYB5D2Q8WUJ1 264 aa9.78□□□□□ -0.84
PTPRD-207ENST00000463477 HMGB4Q8WW32 186 aa9.78□□□□□ -0.84
PTPRD-207ENST00000463477 KIAA1191Q96A73 305 aa9.78□□□□□ -0.84
PTPRD-207ENST00000463477 PTERQ96BW5 349 aa9.78□□□□□ -0.84
PTPRD-207ENST00000463477 CCDC124Q96CT7 223 aaKnown RBP9.78□□□□□ -0.84
PTPRD-207ENST00000463477 MYO19Q96H55 970 aa9.78□□□□□ -0.84
PTPRD-207ENST00000463477 MRGPRX1Q96LB2 322 aa9.78□□□□□ -0.84
PTPRD-207ENST00000463477 ATOH8Q96SQ7 321 aa9.78□□□□□ -0.84
PTPRD-207ENST00000463477 CDRT15Q96T59 188 aa9.78□□□□□ -0.84
PTPRD-207ENST00000463477 CINPQ9BW66 212 aaPredicted RBP9.78□□□□□ -0.84
PTPRD-207ENST00000463477 C1QTNF3Q9BXJ4 246 aa9.78□□□□□ -0.84
PTPRD-207ENST00000463477 TDRD1Q9BXT4 1180 aaKnown RBP9.78□□□□□ -0.84
PTPRD-207ENST00000463477 MRPL1Q9BYD6 325 aaKnown RBP9.78□□□□□ -0.84
PTPRD-207ENST00000463477 TPSD1Q9BZJ3 242 aa9.78□□□□□ -0.84
PTPRD-207ENST00000463477 ALG9Q9H6U8 611 aa9.78□□□□□ -0.84
PTPRD-207ENST00000463477 PDP2Q9P2J9 529 aa9.78□□□□□ -0.84
PTPRD-207ENST00000463477 SUCOQ9UBS9 1254 aaKnown RBP9.78□□□□□ -0.84
PTPRD-207ENST00000463477 SUN2Q9UH99 717 aa9.78□□□□□ -0.84
PTPRD-207ENST00000463477 ADAMTS6Q9UKP5 1117 aa9.78□□□□□ -0.84
PTPRD-207ENST00000463477 RAB23Q9ULC3 237 aa9.78□□□□□ -0.84
PTPRD-207ENST00000463477 KCTD3Q9Y597 815 aa9.78□□□□□ -0.84
PTPRD-207ENST00000463477 OR51B4Q9Y5P0 310 aa9.78□□□□□ -0.84
PTPRD-207ENST00000463477 ARL5AQ9Y689 179 aa9.78□□□□□ -0.84
PTPRD-207ENST00000463477 COMMD10Q9Y6G5 202 aa9.78□□□□□ -0.84
PTPRD-207ENST00000463477 BPTFQ12830 3046 aa9.78□□□□□ -0.84
PTPRD-207ENST00000463477 A0A0D9SEW6 157 aa9.77□□□□□ -0.84
PTPRD-207ENST00000463477 OR51F1A6NGY5 319 aa9.77□□□□□ -0.84
PTPRD-207ENST00000463477 C2orf81A6NN90 581 aa9.77□□□□□ -0.84
PTPRD-207ENST00000463477 BBIP1A8MTZ0 92 aa9.77□□□□□ -0.84
PTPRD-207ENST00000463477 H7C0S8 307 aa9.77□□□□□ -0.84
PTPRD-207ENST00000463477 TRIM38O00635 465 aa9.77□□□□□ -0.84
PTPRD-207ENST00000463477 PFDN6O15212 129 aa9.77□□□□□ -0.84
PTPRD-207ENST00000463477 KERAO60938 352 aa9.77□□□□□ -0.84
PTPRD-207ENST00000463477 ZNF217O75362 1048 aa9.77□□□□□ -0.84
PTPRD-207ENST00000463477 SORBS2O94875 1100 aaKnown RBP9.77□□□□□ -0.84
PTPRD-207ENST00000463477 EPHX1P07099 455 aa9.77□□□□□ -0.84
PTPRD-207ENST00000463477 MZF1P28698 734 aaPredicted RBP9.77□□□□□ -0.84
PTPRD-207ENST00000463477 ADARP55265 1226 aaKnown RBP9.77□□□□□ -0.84
PTPRD-207ENST00000463477 ST8SIA6P61647 398 aa9.77□□□□□ -0.84
PTPRD-207ENST00000463477 TRAP1Q12931 704 aaKnown RBP9.77□□□□□ -0.84
PTPRD-207ENST00000463477 CEACAM7Q14002 265 aa9.77□□□□□ -0.84
PTPRD-207ENST00000463477 LRP8Q14114 963 aa9.77□□□□□ -0.84
PTPRD-207ENST00000463477 FLOT2Q14254 428 aa9.77□□□□□ -0.84
PTPRD-207ENST00000463477 SEMA3AQ14563 771 aa9.77□□□□□ -0.84
PTPRD-207ENST00000463477 MAP7D1Q3KQU3 841 aa9.77□□□□□ -0.84
PTPRD-207ENST00000463477 UGT3A2Q3SY77 523 aa9.77□□□□□ -0.84
PTPRD-207ENST00000463477 LAIR1Q6GTX8 287 aa9.77□□□□□ -0.84
PTPRD-207ENST00000463477 TMEM154Q6P9G4 183 aa9.77□□□□□ -0.84
PTPRD-207ENST00000463477 CYHR1Q6ZMK1 362 aa9.77□□□□□ -0.84
PTPRD-207ENST00000463477 PQLC1Q8N2U9 271 aa9.77□□□□□ -0.84
PTPRD-207ENST00000463477 PGBD3Q8N328 593 aa9.77□□□□□ -0.84
PTPRD-207ENST00000463477 OR52K2Q8NGK3 314 aa9.77□□□□□ -0.84
PTPRD-207ENST00000463477 OR13C4Q8NGS5 318 aa9.77□□□□□ -0.84
PTPRD-207ENST00000463477 HMGCLL1Q8TB92 370 aa9.77□□□□□ -0.84
PTPRD-207ENST00000463477 LPGAT1Q92604 370 aa9.77□□□□□ -0.84
PTPRD-207ENST00000463477 DUS3LQ96G46 650 aaKnown RBP9.77□□□□□ -0.84
PTPRD-207ENST00000463477 LOXL4Q96JB6 756 aa9.77□□□□□ -0.84
PTPRD-207ENST00000463477 MRGPRX3Q96LB0 322 aa9.77□□□□□ -0.84
PTPRD-207ENST00000463477 SLC25A23Q9BV35 468 aa9.77□□□□□ -0.84
PTPRD-207ENST00000463477 MKRN2Q9H000 416 aaKnown RBP9.77□□□□□ -0.84
PTPRD-207ENST00000463477 FBRSQ9HAH7 460 aa9.77□□□□□ -0.84
PTPRD-207ENST00000463477 CYP4F12Q9HCS2 524 aa9.77□□□□□ -0.84
PTPRD-207ENST00000463477 ACSS2Q9NR19 701 aa9.77□□□□□ -0.84
PTPRD-207ENST00000463477 TAS2R13Q9NYV9 303 aa9.77□□□□□ -0.84
PTPRD-207ENST00000463477 ERVW-1Q9UQF0 538 aa9.77□□□□□ -0.84
PTPRD-207ENST00000463477 CRYL1Q9Y2S2 319 aa9.77□□□□□ -0.84
PTPRD-207ENST00000463477 ZNF292O60281 2723 aa9.77□□□□□ -0.84
PTPRD-207ENST00000463477 FRYLO94915 3013 aa9.77□□□□□ -0.85
PTPRD-207ENST00000463477 GON4LQ3T8J9 2241 aa9.77□□□□□ -0.85
PTPRD-207ENST00000463477 TTC24A2A3L6 582 aaPredicted RBP9.77□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms