RNA–Protein interactions for RNA: ENST00000462658.1

UBE4B-204, Transcript of ubiquitination factor E4B, humanhuman

TSL 3

Gene UBE4B, Length 573 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-204ENST00000462658 ANAPC5Q9UJX4 755 aa7.42□□□□□ -1.22
UBE4B-204ENST00000462658 VANGL2Q9ULK5 521 aa7.42□□□□□ -1.22
UBE4B-204ENST00000462658 NEU3Q9UQ49 428 aa7.42□□□□□ -1.22
UBE4B-204ENST00000462658 NOX1Q9Y5S8 564 aa7.42□□□□□ -1.22
UBE4B-204ENST00000462658 MYO16Q9Y6X6 1858 aa7.41□□□□□ -1.22
UBE4B-204ENST00000462658 GREB1Q4ZG55 1949 aa7.41□□□□□ -1.22
UBE4B-204ENST00000462658 DNALI1O14645 258 aaPredicted RBP7.41□□□□□ -1.22
UBE4B-204ENST00000462658 NDC80O14777 642 aa7.41□□□□□ -1.22
UBE4B-204ENST00000462658 PHGDHO43175 533 aaKnown RBP7.41□□□□□ -1.22
UBE4B-204ENST00000462658 ATP8B1O43520 1251 aa7.41□□□□□ -1.22
UBE4B-204ENST00000462658 DNAJB5O75953 348 aa7.41□□□□□ -1.22
UBE4B-204ENST00000462658 SPDEFO95238 335 aa7.41□□□□□ -1.22
UBE4B-204ENST00000462658 FGF19O95750 216 aa7.41□□□□□ -1.22
UBE4B-204ENST00000462658 HNRNPA1P09651 372 aaKnown RBP eCLIP7.41□□□□□ -1.22
UBE4B-204ENST00000462658 IRF1P10914 325 aa7.41□□□□□ -1.22
UBE4B-204ENST00000462658 GJA1P17302 382 aa7.41□□□□□ -1.22
UBE4B-204ENST00000462658 CHRM3P20309 590 aa7.41□□□□□ -1.22
UBE4B-204ENST00000462658 TACR2P21452 398 aa7.41□□□□□ -1.22
UBE4B-204ENST00000462658 CORO1AP31146 461 aaKnown RBP7.41□□□□□ -1.22
UBE4B-204ENST00000462658 HOXA9P31269 272 aa7.41□□□□□ -1.22
UBE4B-204ENST00000462658 RPL22P35268 128 aaKnown RBP7.41□□□□□ -1.22
UBE4B-204ENST00000462658 ACTN2P35609 894 aa7.41□□□□□ -1.22
UBE4B-204ENST00000462658 ITGA8P53708 1063 aa7.41□□□□□ -1.22
UBE4B-204ENST00000462658 MC2RQ01718 297 aa7.41□□□□□ -1.22
UBE4B-204ENST00000462658 AP1B1Q10567 949 aa7.41□□□□□ -1.22
UBE4B-204ENST00000462658 CYP2A13Q16696 494 aa7.41□□□□□ -1.22
UBE4B-204ENST00000462658 P3H1Q32P28 736 aa7.41□□□□□ -1.22
UBE4B-204ENST00000462658 SPDYE7PQ495Y7 208 aa7.41□□□□□ -1.22
UBE4B-204ENST00000462658 RNF220Q5VTB9 566 aa7.41□□□□□ -1.22
UBE4B-204ENST00000462658 IZUMO3Q5VZ72 239 aa7.41□□□□□ -1.22
UBE4B-204ENST00000462658 NADSYN1Q6IA69 706 aa7.41□□□□□ -1.22
UBE4B-204ENST00000462658 FBXL22Q6P050 247 aa7.41□□□□□ -1.22
UBE4B-204ENST00000462658 ADGRD2Q7Z7M1 963 aa7.41□□□□□ -1.22
UBE4B-204ENST00000462658 CHSY1Q86X52 802 aa7.41□□□□□ -1.22
UBE4B-204ENST00000462658 ZNF683Q8IZ20 524 aa7.41□□□□□ -1.22
UBE4B-204ENST00000462658 NPWQ8N729 165 aa7.41□□□□□ -1.22
UBE4B-204ENST00000462658 RTL3Q8N8U3 475 aaKnown RBP7.41□□□□□ -1.22
UBE4B-204ENST00000462658 MAB21L3Q8N8X9 362 aa7.41□□□□□ -1.22
UBE4B-204ENST00000462658 FAM46DQ8NEK8 389 aa7.41□□□□□ -1.22
UBE4B-204ENST00000462658 FBXO25Q8TCJ0 367 aa7.41□□□□□ -1.22
UBE4B-204ENST00000462658 PROKR1Q8TCW9 393 aa7.41□□□□□ -1.22
UBE4B-204ENST00000462658 GDPD5Q8WTR4 605 aa7.41□□□□□ -1.22
UBE4B-204ENST00000462658 HTR3CQ8WXA8 447 aa7.41□□□□□ -1.22
UBE4B-204ENST00000462658 CAVIN3Q969G5 261 aa7.41□□□□□ -1.22
UBE4B-204ENST00000462658 IGSF8Q969P0 613 aa7.41□□□□□ -1.22
UBE4B-204ENST00000462658 RTP4Q96DX8 246 aa7.41□□□□□ -1.22
UBE4B-204ENST00000462658 CELF6Q96J87 481 aaKnown RBP7.41□□□□□ -1.22
UBE4B-204ENST00000462658 GDAP1L1Q96MZ0 367 aa7.41□□□□□ -1.22
UBE4B-204ENST00000462658 TRIB1Q96RU8 372 aa7.41□□□□□ -1.22
UBE4B-204ENST00000462658 SLC22A12Q96S37 553 aa7.41□□□□□ -1.22
UBE4B-204ENST00000462658 FMO2Q99518 471 aa7.41□□□□□ -1.22
UBE4B-204ENST00000462658 LGMNQ99538 433 aa7.41□□□□□ -1.22
UBE4B-204ENST00000462658 FERMT1Q9BQL6 677 aa7.41□□□□□ -1.22
UBE4B-204ENST00000462658 ZYG11BQ9C0D3 744 aa7.41□□□□□ -1.22
UBE4B-204ENST00000462658 BRD8Q9H0E9 1235 aa7.41□□□□□ -1.22
UBE4B-204ENST00000462658 TLE6Q9H808 572 aa7.41□□□□□ -1.22
UBE4B-204ENST00000462658 HCFC1R1Q9NWW0 138 aa7.41□□□□□ -1.22
UBE4B-204ENST00000462658 DONSONQ9NYP3 566 aa7.41□□□□□ -1.22
UBE4B-204ENST00000462658 MPP6Q9NZW5 540 aa7.41□□□□□ -1.22
UBE4B-204ENST00000462658 CAMSAP3Q9P1Y5 1249 aaPredicted RBP7.41□□□□□ -1.22
UBE4B-204ENST00000462658 PAK5Q9P286 719 aa7.41□□□□□ -1.22
UBE4B-204ENST00000462658 DNMT3BQ9UBC3 853 aaKnown RBP7.41□□□□□ -1.22
UBE4B-204ENST00000462658 MTRF1LQ9UGC7 380 aaKnown RBP7.41□□□□□ -1.22
UBE4B-204ENST00000462658 CPQQ9Y646 472 aa7.41□□□□□ -1.22
UBE4B-204ENST00000462658 IGLV3-10A0A075B6K4 115 aa7.4□□□□□ -1.22
UBE4B-204ENST00000462658 TRAV19A0A0A6YYK7 116 aa7.4□□□□□ -1.22
UBE4B-204ENST00000462658 CCDC195A0A1B0GUA6 201 aa7.4□□□□□ -1.22
UBE4B-204ENST00000462658 C5orf60A6NFR6 353 aa7.4□□□□□ -1.22
UBE4B-204ENST00000462658 F5H5T6 163 aa7.4□□□□□ -1.22
UBE4B-204ENST00000462658 DFFAO00273 331 aa7.4□□□□□ -1.22
UBE4B-204ENST00000462658 GCATO75600 419 aa7.4□□□□□ -1.22
UBE4B-204ENST00000462658 ZNF189O75820 626 aaPredicted RBP7.4□□□□□ -1.22
UBE4B-204ENST00000462658 CNTN5O94779 1100 aa7.4□□□□□ -1.22
UBE4B-204ENST00000462658 UNC5CO95185 931 aa7.4□□□□□ -1.22
UBE4B-204ENST00000462658 LATS1O95835 1130 aa7.4□□□□□ -1.22
UBE4B-204ENST00000462658 ABHD16AO95870 558 aa7.4□□□□□ -1.22
UBE4B-204ENST00000462658 OLFM2O95897 454 aa7.4□□□□□ -1.22
UBE4B-204ENST00000462658 KLKB1P03952 638 aa7.4□□□□□ -1.22
UBE4B-204ENST00000462658 RHOP08100 348 aa7.4□□□□□ -1.22
UBE4B-204ENST00000462658 RHCEP18577 417 aa7.4□□□□□ -1.22
UBE4B-204ENST00000462658 GARSP41250 739 aaKnown RBP7.4□□□□□ -1.22
UBE4B-204ENST00000462658 CCR2P41597 374 aa7.4□□□□□ -1.22
UBE4B-204ENST00000462658 NRIP1P48552 1158 aa7.4□□□□□ -1.22
UBE4B-204ENST00000462658 RHDQ02161 417 aa7.4□□□□□ -1.22
UBE4B-204ENST00000462658 PIGFQ07326 219 aa7.4□□□□□ -1.22
UBE4B-204ENST00000462658 GALNT2Q10471 571 aa7.4□□□□□ -1.22
UBE4B-204ENST00000462658 CASP8Q14790 479 aa7.4□□□□□ -1.22
UBE4B-204ENST00000462658 DUSP6Q16828 381 aa7.4□□□□□ -1.22
UBE4B-204ENST00000462658 ARHGAP15Q53QZ3 475 aa7.4□□□□□ -1.22
UBE4B-204ENST00000462658 ALFQ53S48 1182 aa7.4□□□□□ -1.22
UBE4B-204ENST00000462658 FAM133BQ5BKY9 247 aaKnown RBP7.4□□□□□ -1.22
UBE4B-204ENST00000462658 HIBCHQ6NVY1 386 aaPredicted RBP7.4□□□□□ -1.22
UBE4B-204ENST00000462658 RFWD3Q6PCD5 774 aa7.4□□□□□ -1.22
UBE4B-204ENST00000462658 RHBDF2Q6PJF5 856 aa7.4□□□□□ -1.22
UBE4B-204ENST00000462658 C4orf22Q6V702 233 aa7.4□□□□□ -1.22
UBE4B-204ENST00000462658 DBX2Q6ZNG2 339 aa7.4□□□□□ -1.22
UBE4B-204ENST00000462658 PCGF5Q86SE9 256 aa7.4□□□□□ -1.22
UBE4B-204ENST00000462658 NLRP14Q86W24 1093 aa7.4□□□□□ -1.22
UBE4B-204ENST00000462658 ARHGAP12Q8IWW6 846 aa7.4□□□□□ -1.22
UBE4B-204ENST00000462658 LGI2Q8N0V4 545 aa7.4□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms