RNA–Protein interactions for RNA: ENST00000462030.5

HPS3-204, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 2

Gene HPS3, Length 2,486 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-204ENST00000462030 FAM126BQ8IXS8 530 aa18.21■□□□□ 0.51
HPS3-204ENST00000462030 SDCCAG3Q96C92 435 aa18.21■□□□□ 0.51
HPS3-204ENST00000462030 TLR6Q9Y2C9 796 aa18.21■□□□□ 0.51
HPS3-204ENST00000462030 TMEM247A6NEH6 219 aa18.21■□□□□ 0.5
HPS3-204ENST00000462030 E2F3O00716 465 aa18.21■□□□□ 0.5
HPS3-204ENST00000462030 KLK8O60259 260 aa18.21■□□□□ 0.5
HPS3-204ENST00000462030 DFNA5O60443 496 aa18.21■□□□□ 0.5
HPS3-204ENST00000462030 CST1P01037 141 aa18.21■□□□□ 0.5
HPS3-204ENST00000462030 CYP11A1P05108 521 aa18.21■□□□□ 0.5
HPS3-204ENST00000462030 ARL1P40616 181 aaPredicted RBP18.21■□□□□ 0.5
HPS3-204ENST00000462030 TBX4P57082 545 aa18.21■□□□□ 0.5
HPS3-204ENST00000462030 PPP2R2BQ00005 443 aa18.21■□□□□ 0.5
HPS3-204ENST00000462030 ZNF846Q147U1 533 aa18.21■□□□□ 0.5
HPS3-204ENST00000462030 CTF1Q16619 201 aa18.21■□□□□ 0.5
HPS3-204ENST00000462030 RAP1GAP2Q684P5 730 aa18.21■□□□□ 0.5
HPS3-204ENST00000462030 LETMD1Q6P1Q0 360 aa18.21■□□□□ 0.5
HPS3-204ENST00000462030 ABI1Q8IZP0 508 aa18.21■□□□□ 0.5
HPS3-204ENST00000462030 ZNF555Q8NEP9 628 aa18.21■□□□□ 0.5
HPS3-204ENST00000462030 PEX13Q92968 403 aa18.21■□□□□ 0.5
HPS3-204ENST00000462030 ITPKCQ96DU7 683 aa18.21■□□□□ 0.5
HPS3-204ENST00000462030 FEM1AQ9BSK4 669 aa18.21■□□□□ 0.5
HPS3-204ENST00000462030 MROQ9BYG7 248 aa18.21■□□□□ 0.5
HPS3-204ENST00000462030 POLR1EQ9GZS1 481 aaKnown RBP18.21■□□□□ 0.5
HPS3-204ENST00000462030 VAPAQ9P0L0 249 aa18.21■□□□□ 0.5
HPS3-204ENST00000462030 SPO11Q9Y5K1 396 aa18.21■□□□□ 0.5
HPS3-204ENST00000462030 FAM92AA1XBS5 289 aa18.2■□□□□ 0.5
HPS3-204ENST00000462030 PTGES3LE9PB15 166 aa18.2■□□□□ 0.5
HPS3-204ENST00000462030 CTSHP09668 335 aa18.2■□□□□ 0.5
HPS3-204ENST00000462030 GABARAPL2P60520 117 aa18.2■□□□□ 0.5
HPS3-204ENST00000462030 SPESP1Q6UW49 350 aa18.2■□□□□ 0.5
HPS3-204ENST00000462030 SIDT2Q8NBJ9 832 aaKnown RBP18.2■□□□□ 0.5
HPS3-204ENST00000462030 GTF3C2Q8WUA4 911 aaPredicted RBP18.2■□□□□ 0.5
HPS3-204ENST00000462030 SMIM14Q96QK8 99 aa18.2■□□□□ 0.5
HPS3-204ENST00000462030 C17orf80Q9BSJ5 609 aa18.2■□□□□ 0.5
HPS3-204ENST00000462030 POLR3HQ9Y535 204 aaPredicted RBP18.2■□□□□ 0.5
HPS3-204ENST00000462030 ACTL7AQ9Y615 435 aa18.2■□□□□ 0.5
HPS3-204ENST00000462030 NIPSNAP2O75323 286 aa18.2■□□□□ 0.5
HPS3-204ENST00000462030 TSPAN12O95859 305 aa18.2■□□□□ 0.5
HPS3-204ENST00000462030 PCMT1P22061 227 aa18.2■□□□□ 0.5
HPS3-204ENST00000462030 TRIM32Q13049 653 aa18.2■□□□□ 0.5
HPS3-204ENST00000462030 PTPRNQ16849 979 aa18.2■□□□□ 0.5
HPS3-204ENST00000462030 FBXL22Q6P050 247 aa18.2■□□□□ 0.5
HPS3-204ENST00000462030 CYP20A1Q6UW02 462 aa18.2■□□□□ 0.5
HPS3-204ENST00000462030 PJA1Q8NG27 643 aa18.2■□□□□ 0.5
HPS3-204ENST00000462030 RDH12Q96NR8 316 aa18.2■□□□□ 0.5
HPS3-204ENST00000462030 AKIP1Q9NQ31 210 aa18.2■□□□□ 0.5
HPS3-204ENST00000462030 HEBP1Q9NRV9 189 aa18.2■□□□□ 0.5
HPS3-204ENST00000462030 DNAJB9Q9UBS3 223 aa18.2■□□□□ 0.5
HPS3-204ENST00000462030 LIMD1Q9UGP4 676 aa18.2■□□□□ 0.5
HPS3-204ENST00000462030 SLC1A7O00341 560 aa18.19■□□□□ 0.5
HPS3-204ENST00000462030 RAMP2O60895 175 aa18.19■□□□□ 0.5
HPS3-204ENST00000462030 UGT2B11O75310 529 aa18.19■□□□□ 0.5
HPS3-204ENST00000462030 JRKO75564 520 aa18.19■□□□□ 0.5
HPS3-204ENST00000462030 PRKACGP22612 351 aa18.19■□□□□ 0.5
HPS3-204ENST00000462030 GPR15P49685 360 aa18.19■□□□□ 0.5
HPS3-204ENST00000462030 KPNA1P52294 538 aaPredicted RBP18.19■□□□□ 0.5
HPS3-204ENST00000462030 TSPY1Q01534 308 aa18.19■□□□□ 0.5
HPS3-204ENST00000462030 IFITM3Q01628 133 aa18.19■□□□□ 0.5
HPS3-204ENST00000462030 OCA2Q04671 838 aa18.19■□□□□ 0.5
HPS3-204ENST00000462030 IL10RBQ08334 325 aa18.19■□□□□ 0.5
HPS3-204ENST00000462030 PWP1Q13610 501 aa18.19■□□□□ 0.5
HPS3-204ENST00000462030 TXNDC11Q6PKC3 985 aa18.19■□□□□ 0.5
HPS3-204ENST00000462030 IL27RAQ6UWB1 636 aa18.19■□□□□ 0.5
HPS3-204ENST00000462030 OR2T12Q8NG77 320 aa18.19■□□□□ 0.5
HPS3-204ENST00000462030 ZFP90Q8TF47 636 aa18.19■□□□□ 0.5
HPS3-204ENST00000462030 CCDC90BQ9GZT6 254 aa18.19■□□□□ 0.5
HPS3-204ENST00000462030 IKZF5Q9H5V7 419 aa18.19■□□□□ 0.5
HPS3-204ENST00000462030 CD274Q9NZQ7 290 aa18.19■□□□□ 0.5
HPS3-204ENST00000462030 MTRRQ9UBK8 725 aa18.19■□□□□ 0.5
HPS3-204ENST00000462030 SNX5Q9Y5X3 404 aa18.19■□□□□ 0.5
HPS3-204ENST00000462030 GRXCR2A6NFK2 248 aa18.18■□□□□ 0.5
HPS3-204ENST00000462030 ARNTLO00327 626 aa18.18■□□□□ 0.5
HPS3-204ENST00000462030 ANKRD28O15084 1053 aa18.18■□□□□ 0.5
HPS3-204ENST00000462030 NDUFS3O75489 264 aa18.18■□□□□ 0.5
HPS3-204ENST00000462030 CAPN1P07384 714 aa18.18■□□□□ 0.5
HPS3-204ENST00000462030 PBX3P40426 434 aa18.18■□□□□ 0.5
HPS3-204ENST00000462030 ZNF140P52738 457 aaPredicted RBP18.18■□□□□ 0.5
HPS3-204ENST00000462030 ILF2Q12905 390 aaKnown RBP18.18■□□□□ 0.5
HPS3-204ENST00000462030 SERINC3Q13530 473 aa18.18■□□□□ 0.5
HPS3-204ENST00000462030 ZNF235Q14590 738 aa18.18■□□□□ 0.5
HPS3-204ENST00000462030 C18orf21Q32NC0 220 aaPredicted RBP18.18■□□□□ 0.5
HPS3-204ENST00000462030 TMEM179BQ7Z7N9 219 aa18.18■□□□□ 0.5
HPS3-204ENST00000462030 SLCO6A1Q86UG4 719 aa18.18■□□□□ 0.5
HPS3-204ENST00000462030 ANKRD13BQ86YJ7 626 aa18.18■□□□□ 0.5
HPS3-204ENST00000462030 OR4K2Q8NGD2 314 aa18.18■□□□□ 0.5
HPS3-204ENST00000462030 OR10A6Q8NH74 314 aa18.18■□□□□ 0.5
HPS3-204ENST00000462030 EEF1AKMT1Q8WVE0 214 aa18.18■□□□□ 0.5
HPS3-204ENST00000462030 MYEOVQ96EZ4 313 aa18.18■□□□□ 0.5
HPS3-204ENST00000462030 SLC47A1Q96FL8 570 aa18.18■□□□□ 0.5
HPS3-204ENST00000462030 NODALQ96S42 347 aa18.18■□□□□ 0.5
HPS3-204ENST00000462030 HEPHQ9BQS7 1158 aa18.18■□□□□ 0.5
HPS3-204ENST00000462030 UGT2B28Q9BY64 529 aa18.18■□□□□ 0.5
HPS3-204ENST00000462030 ADGRE2Q9UHX3 823 aa18.18■□□□□ 0.5
HPS3-204ENST00000462030 GNGT2O14610 69 aa18.18■□□□□ 0.5
HPS3-204ENST00000462030 GSTA4O15217 222 aa18.18■□□□□ 0.5
HPS3-204ENST00000462030 HS6ST1O60243 411 aa18.18■□□□□ 0.5
HPS3-204ENST00000462030 OR1I1O60431 355 aa18.18■□□□□ 0.5
HPS3-204ENST00000462030 TBX18O95935 607 aa18.18■□□□□ 0.5
HPS3-204ENST00000462030 UGT2B4P06133 528 aa18.18■□□□□ 0.5
HPS3-204ENST00000462030 ISL1P61371 349 aa18.18■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms