RNA–Protein interactions for RNA: ENST00000459994.2

SDF4-204, Transcript of stromal cell derived factor 4, humanhuman

TSL 5

Gene SDF4, Length 604 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-204ENST00000459994 NAGSQ8N159 534 aa15.37■□□□□ 0.05
SDF4-204ENST00000459994 MREGQ8N565 214 aa15.37■□□□□ 0.05
SDF4-204ENST00000459994 GSDMBQ8TAX9 411 aa15.37■□□□□ 0.05
SDF4-204ENST00000459994 HDAC10Q969S8 669 aa15.37■□□□□ 0.05
SDF4-204ENST00000459994 TRIM56Q9BRZ2 755 aaKnown RBP15.37■□□□□ 0.05
SDF4-204ENST00000459994 FUT8Q9BYC5 575 aa15.37■□□□□ 0.05
SDF4-204ENST00000459994 FAM83DQ9H4H8 585 aa15.37■□□□□ 0.05
SDF4-204ENST00000459994 CPNE5Q9HCH3 593 aa15.37■□□□□ 0.05
SDF4-204ENST00000459994 BPIFA1Q9NP55 256 aa15.37■□□□□ 0.05
SDF4-204ENST00000459994 IL26Q9NPH9 171 aa15.37■□□□□ 0.05
SDF4-204ENST00000459994 MOCS1Q9NZB8 636 aa15.37■□□□□ 0.05
SDF4-204ENST00000459994 LRIT1Q9P2V4 623 aa15.37■□□□□ 0.05
SDF4-204ENST00000459994 FKBPLQ9UIM3 349 aa15.37■□□□□ 0.05
SDF4-204ENST00000459994 APPL1Q9UKG1 709 aa15.37■□□□□ 0.05
SDF4-204ENST00000459994 CNOT6Q9ULM6 557 aaKnown RBP15.37■□□□□ 0.05
SDF4-204ENST00000459994 PRKAB1Q9Y478 270 aa15.37■□□□□ 0.05
SDF4-204ENST00000459994 ZNF106Q9H2Y7 1883 aaKnown RBP15.37■□□□□ 0.05
SDF4-204ENST00000459994 MGAQ8IWI9 3026 aa15.37■□□□□ 0.05
SDF4-204ENST00000459994 UQCRHLA0A096LP55 91 aa15.36■□□□□ 0.05
SDF4-204ENST00000459994 B4GAT1O43505 415 aa15.36■□□□□ 0.05
SDF4-204ENST00000459994 EML2O95834 649 aa15.36■□□□□ 0.05
SDF4-204ENST00000459994 PRB1P04280 392 aa15.36■□□□□ 0.05
SDF4-204ENST00000459994 IVLP07476 585 aa15.36■□□□□ 0.05
SDF4-204ENST00000459994 UQCRHP07919 91 aa15.36■□□□□ 0.05
SDF4-204ENST00000459994 ABHD2P08910 425 aa15.36■□□□□ 0.05
SDF4-204ENST00000459994 GLB1P16278 677 aa15.36■□□□□ 0.05
SDF4-204ENST00000459994 TEAD1P28347 426 aa15.36■□□□□ 0.05
SDF4-204ENST00000459994 SSTR1P30872 391 aa15.36■□□□□ 0.05
SDF4-204ENST00000459994 XIAPP98170 497 aa15.36■□□□□ 0.05
SDF4-204ENST00000459994 B4GALNT1Q00973 533 aa15.36■□□□□ 0.05
SDF4-204ENST00000459994 LONRF1Q17RB8 773 aa15.36■□□□□ 0.05
SDF4-204ENST00000459994 ADAMTSL4Q6UY14 1074 aa15.36■□□□□ 0.05
SDF4-204ENST00000459994 C3orf62Q6ZUJ4 267 aa15.36■□□□□ 0.05
SDF4-204ENST00000459994 GPR26Q8NDV2 337 aa15.36■□□□□ 0.05
SDF4-204ENST00000459994 ZNF248Q8NDW4 579 aa15.36■□□□□ 0.05
SDF4-204ENST00000459994 ZDHHC1Q8WTX9 485 aa15.36■□□□□ 0.05
SDF4-204ENST00000459994 SCARF2Q96GP6 870 aaPredicted RBP15.36■□□□□ 0.05
SDF4-204ENST00000459994 COX14Q96I36 57 aa15.36■□□□□ 0.05
SDF4-204ENST00000459994 ARFGAP3Q9NP61 516 aa15.36■□□□□ 0.05
SDF4-204ENST00000459994 SDK2Q58EX2 2172 aa15.36■□□□□ 0.05
SDF4-204ENST00000459994 CCDC187A0A096LP49 1063 aa15.35■□□□□ 0.05
SDF4-204ENST00000459994 GLYATL1P3A0A0U1RQE8 302 aa15.35■□□□□ 0.05
SDF4-204ENST00000459994 CCDC162PA2VCL2 907 aa15.35■□□□□ 0.05
SDF4-204ENST00000459994 GAPDHSO14556 408 aaPredicted RBP15.35■□□□□ 0.05
SDF4-204ENST00000459994 RIPK2O43353 540 aa15.35■□□□□ 0.05
SDF4-204ENST00000459994 TNFSF15O95150 251 aa15.35■□□□□ 0.05
SDF4-204ENST00000459994 VAPBO95292 243 aa15.35■□□□□ 0.05
SDF4-204ENST00000459994 H2AFXP16104 143 aaPredicted RBP15.35■□□□□ 0.05
SDF4-204ENST00000459994 ITIH1P19827 911 aa15.35■□□□□ 0.05
SDF4-204ENST00000459994 ARNTP27540 789 aa15.35■□□□□ 0.05
SDF4-204ENST00000459994 PHBP35232 272 aa15.35■□□□□ 0.05
SDF4-204ENST00000459994 ETV5P41161 510 aa15.35■□□□□ 0.05
SDF4-204ENST00000459994 OR1D5P58170 312 aa15.35■□□□□ 0.05
SDF4-204ENST00000459994 ERVPABLB-1P60509 514 aa15.35■□□□□ 0.05
SDF4-204ENST00000459994 PRAMEP78395 509 aa15.35■□□□□ 0.05
SDF4-204ENST00000459994 TMPRSS15P98073 1019 aa15.35■□□□□ 0.05
SDF4-204ENST00000459994 PEX6Q13608 980 aa15.35■□□□□ 0.05
SDF4-204ENST00000459994 PYCR3Q53H96 274 aa15.35■□□□□ 0.05
SDF4-204ENST00000459994 ZNF648Q5T619 568 aaPredicted RBP15.35■□□□□ 0.05
SDF4-204ENST00000459994 HENMT1Q5T8I9 393 aaKnown RBP15.35■□□□□ 0.05
SDF4-204ENST00000459994 PDPK2PQ6A1A2 396 aa15.35■□□□□ 0.05
SDF4-204ENST00000459994 IGF2-ASQ6U949 168 aa15.35■□□□□ 0.05
SDF4-204ENST00000459994 AFTPHQ6ULP2 937 aa15.35■□□□□ 0.05
SDF4-204ENST00000459994 LMNTD2Q8IXW0 634 aa15.35■□□□□ 0.05
SDF4-204ENST00000459994 ARL14Q8N4G2 192 aa15.35■□□□□ 0.05
SDF4-204ENST00000459994 TRAM1L1Q8N609 369 aa15.35■□□□□ 0.05
SDF4-204ENST00000459994 OR6P1Q8NGX9 317 aa15.35■□□□□ 0.05
SDF4-204ENST00000459994 WDR36Q8NI36 951 aaKnown RBP15.35■□□□□ 0.05
SDF4-204ENST00000459994 CERS2Q96G23 380 aa15.35■□□□□ 0.05
SDF4-204ENST00000459994 LIN37Q96GY3 246 aaPredicted RBP15.35■□□□□ 0.05
SDF4-204ENST00000459994 GSDMCQ9BYG8 508 aa15.35■□□□□ 0.05
SDF4-204ENST00000459994 SEMA6CQ9H3T2 930 aa15.35■□□□□ 0.05
SDF4-204ENST00000459994 VPS37BQ9H9H4 285 aa15.35■□□□□ 0.05
SDF4-204ENST00000459994 RDH14Q9HBH5 336 aa15.35■□□□□ 0.05
SDF4-204ENST00000459994 ARGLU1Q9NWB6 273 aaPredicted RBP15.35■□□□□ 0.05
SDF4-204ENST00000459994 TRNAU1APQ9NX07 287 aaKnown RBP15.35■□□□□ 0.05
SDF4-204ENST00000459994 PCDHGA8Q9Y5G5 932 aa15.35■□□□□ 0.05
SDF4-204ENST00000459994 TRBV23OR9-2A0A075B6M9 112 aa15.34■□□□□ 0.05
SDF4-204ENST00000459994 TCRBV9S1A1TA0A576 114 aa15.34■□□□□ 0.05
SDF4-204ENST00000459994 AGAP14A8MT82 685 aa15.34■□□□□ 0.05
SDF4-204ENST00000459994 CCL22O00626 93 aa15.34■□□□□ 0.05
SDF4-204ENST00000459994 PPM1DO15297 605 aa15.34■□□□□ 0.05
SDF4-204ENST00000459994 DNAJC6O75061 913 aa15.34■□□□□ 0.05
SDF4-204ENST00000459994 SRP72O76094 671 aaKnown RBP15.34■□□□□ 0.05
SDF4-204ENST00000459994 GOT2P00505 430 aaKnown RBP15.34■□□□□ 0.05
SDF4-204ENST00000459994 PYGLP06737 847 aa15.34■□□□□ 0.05
SDF4-204ENST00000459994 MC4RP32245 332 aa15.34■□□□□ 0.05
SDF4-204ENST00000459994 STX2P32856 288 aa15.34■□□□□ 0.05
SDF4-204ENST00000459994 UGT1A5P35504 534 aa15.34■□□□□ 0.05
SDF4-204ENST00000459994 INHBCP55103 352 aa15.34■□□□□ 0.05
SDF4-204ENST00000459994 CXADRP78310 365 aa15.34■□□□□ 0.05
SDF4-204ENST00000459994 CACNG1Q06432 222 aa15.34■□□□□ 0.05
SDF4-204ENST00000459994 MGAT5Q09328 741 aa15.34■□□□□ 0.05
SDF4-204ENST00000459994 ILF3Q12906 894 aaKnown RBP eCLIP15.34■□□□□ 0.05
SDF4-204ENST00000459994 SRSF6Q13247 344 aaKnown RBP15.34■□□□□ 0.05
SDF4-204ENST00000459994 GPR33Q49SQ1 333 aa15.34■□□□□ 0.05
SDF4-204ENST00000459994 BEND6Q5SZJ8 279 aaPredicted RBP15.34■□□□□ 0.05
SDF4-204ENST00000459994 NEPROQ6NW34 567 aa15.34■□□□□ 0.05
SDF4-204ENST00000459994 PCSK4Q6UW60 755 aa15.34■□□□□ 0.05
SDF4-204ENST00000459994 ZNF574Q6ZN55 896 aaPredicted RBP15.34■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 112.8 ms