RNA–Protein interactions for RNA: ENST00000456257.1

ERCC3-204, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 4

Gene ERCC3, Length 563 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-204ENST00000456257 LIMD1Q9UGP4 676 aa7.37□□□□□ -1.23
ERCC3-204ENST00000456257 PCTPQ9UKL6 214 aa7.37□□□□□ -1.23
ERCC3-204ENST00000456257 COLQQ9Y215 455 aaPredicted RBP7.37□□□□□ -1.23
ERCC3-204ENST00000456257 RRP15Q9Y3B9 282 aaKnown RBP7.37□□□□□ -1.23
ERCC3-204ENST00000456257 BPTFQ12830 3046 aa7.37□□□□□ -1.23
ERCC3-204ENST00000456257 CKAP5Q14008 2032 aa7.37□□□□□ -1.23
ERCC3-204ENST00000456257 COL4A2P08572 1712 aa7.36□□□□□ -1.23
ERCC3-204ENST00000456257 A0A0G2JND7 137 aa7.36□□□□□ -1.23
ERCC3-204ENST00000456257 SERTM1A2A2V5 107 aa7.36□□□□□ -1.23
ERCC3-204ENST00000456257 PRR19A6NJB7 356 aa7.36□□□□□ -1.23
ERCC3-204ENST00000456257 TRPC5OSA6NMA1 111 aa7.36□□□□□ -1.23
ERCC3-204ENST00000456257 LOC730098B7Z3J9 87 aa7.36□□□□□ -1.23
ERCC3-204ENST00000456257 GPR89AB7ZAQ6 455 aa7.36□□□□□ -1.23
ERCC3-204ENST00000456257 BTN3A1O00481 513 aa7.36□□□□□ -1.23
ERCC3-204ENST00000456257 SOX1O00570 391 aaPredicted RBP7.36□□□□□ -1.23
ERCC3-204ENST00000456257 E2F3O00716 465 aa7.36□□□□□ -1.23
ERCC3-204ENST00000456257 SDHDO14521 159 aa7.36□□□□□ -1.23
ERCC3-204ENST00000456257 FCHO1O14526 889 aa7.36□□□□□ -1.23
ERCC3-204ENST00000456257 MID1O15344 667 aa7.36□□□□□ -1.23
ERCC3-204ENST00000456257 TAPBPO15533 448 aa7.36□□□□□ -1.23
ERCC3-204ENST00000456257 PLRG1O43660 514 aaKnown RBP7.36□□□□□ -1.23
ERCC3-204ENST00000456257 MMP20O60882 483 aa7.36□□□□□ -1.23
ERCC3-204ENST00000456257 PSIP1O75475 530 aaKnown RBP7.36□□□□□ -1.23
ERCC3-204ENST00000456257 TRIM16O95361 564 aa7.36□□□□□ -1.23
ERCC3-204ENST00000456257 FTH1P02794 183 aa7.36□□□□□ -1.23
ERCC3-204ENST00000456257 C8GP07360 202 aa7.36□□□□□ -1.23
ERCC3-204ENST00000456257 GPR89BP0CG08 455 aa7.36□□□□□ -1.23
ERCC3-204ENST00000456257 C6P13671 934 aa7.36□□□□□ -1.23
ERCC3-204ENST00000456257 SERPINB3P29508 390 aa7.36□□□□□ -1.23
ERCC3-204ENST00000456257 CCR10P46092 362 aa7.36□□□□□ -1.23
ERCC3-204ENST00000456257 SOX9P48436 509 aa7.36□□□□□ -1.23
ERCC3-204ENST00000456257 PKNOX1P55347 436 aa7.36□□□□□ -1.23
ERCC3-204ENST00000456257 NCALDP61601 193 aa7.36□□□□□ -1.23
ERCC3-204ENST00000456257 CLCQ05315 142 aa7.36□□□□□ -1.23
ERCC3-204ENST00000456257 GRSF1Q12849 480 aaKnown RBP eCLIP7.36□□□□□ -1.23
ERCC3-204ENST00000456257 SP140Q13342 867 aa7.36□□□□□ -1.23
ERCC3-204ENST00000456257 CCINQ13939 588 aa7.36□□□□□ -1.23
ERCC3-204ENST00000456257 E2F2Q14209 437 aa7.36□□□□□ -1.23
ERCC3-204ENST00000456257 ACOX1Q15067 660 aa7.36□□□□□ -1.23
ERCC3-204ENST00000456257 PFKFB4Q16877 469 aa7.36□□□□□ -1.23
ERCC3-204ENST00000456257 ZXDCQ2QGD7 858 aaPredicted RBP7.36□□□□□ -1.23
ERCC3-204ENST00000456257 WSCD2Q2TBF2 565 aa7.36□□□□□ -1.23
ERCC3-204ENST00000456257 LRRC73Q5JTD7 316 aa7.36□□□□□ -1.23
ERCC3-204ENST00000456257 CFAP157Q5JU67 520 aa7.36□□□□□ -1.23
ERCC3-204ENST00000456257 SEL1L3Q68CR1 1132 aa7.36□□□□□ -1.23
ERCC3-204ENST00000456257 KIAA1211LQ6NV74 962 aa7.36□□□□□ -1.23
ERCC3-204ENST00000456257 PNCKQ6P2M8 343 aa7.36□□□□□ -1.23
ERCC3-204ENST00000456257 LARP4Q71RC2 724 aaKnown RBP eCLIP7.36□□□□□ -1.23
ERCC3-204ENST00000456257 RAB44Q7Z6P3 723 aaPredicted RBP7.36□□□□□ -1.23
ERCC3-204ENST00000456257 CHPFQ8IZ52 775 aa7.36□□□□□ -1.23
ERCC3-204ENST00000456257 PELI3Q8N2H9 469 aa7.36□□□□□ -1.23
ERCC3-204ENST00000456257 FBXO39Q8N4B4 442 aa7.36□□□□□ -1.23
ERCC3-204ENST00000456257 PAF1Q8N7H5 531 aa7.36□□□□□ -1.23
ERCC3-204ENST00000456257 CCNYL1Q8N7R7 359 aa7.36□□□□□ -1.23
ERCC3-204ENST00000456257 ST13P5Q8NFI4 369 aaPredicted RBP7.36□□□□□ -1.23
ERCC3-204ENST00000456257 ASZ1Q8WWH4 475 aa7.36□□□□□ -1.23
ERCC3-204ENST00000456257 RHBDF1Q96CC6 855 aa7.36□□□□□ -1.23
ERCC3-204ENST00000456257 PHF21BQ96EK2 531 aa7.36□□□□□ -1.23
ERCC3-204ENST00000456257 MOCOSQ96EN8 888 aa7.36□□□□□ -1.23
ERCC3-204ENST00000456257 SGF29Q96ES7 293 aa7.36□□□□□ -1.23
ERCC3-204ENST00000456257 DCUN1D1Q96GG9 259 aa7.36□□□□□ -1.23
ERCC3-204ENST00000456257 HIC2Q96JB3 615 aa7.36□□□□□ -1.23
ERCC3-204ENST00000456257 ZNF382Q96SR6 550 aa7.36□□□□□ -1.23
ERCC3-204ENST00000456257 GAS2L1Q99501 681 aaPredicted RBP7.36□□□□□ -1.23
ERCC3-204ENST00000456257 EBF4Q9BQW3 602 aa7.36□□□□□ -1.23
ERCC3-204ENST00000456257 NTMT1Q9BV86 223 aa7.36□□□□□ -1.23
ERCC3-204ENST00000456257 NUSAP1Q9BXS6 441 aaKnown RBP7.36□□□□□ -1.23
ERCC3-204ENST00000456257 NMUR2Q9GZQ4 415 aa7.36□□□□□ -1.23
ERCC3-204ENST00000456257 C1orf21Q9H246 121 aa7.36□□□□□ -1.23
ERCC3-204ENST00000456257 PARVBQ9HBI1 364 aa7.36□□□□□ -1.23
ERCC3-204ENST00000456257 DYRK4Q9NR20 520 aa7.36□□□□□ -1.23
ERCC3-204ENST00000456257 TMEM45AQ9NWC5 275 aa7.36□□□□□ -1.23
ERCC3-204ENST00000456257 ZNF225Q9UK10 706 aa7.36□□□□□ -1.23
ERCC3-204ENST00000456257 FZD4Q9ULV1 537 aa7.36□□□□□ -1.23
ERCC3-204ENST00000456257 RNF112Q9ULX5 631 aa7.36□□□□□ -1.23
ERCC3-204ENST00000456257 ZFR2Q9UPR6 939 aaKnown RBP7.36□□□□□ -1.23
ERCC3-204ENST00000456257 ITM2BQ9Y287 266 aa7.36□□□□□ -1.23
ERCC3-204ENST00000456257 TNRC18O15417 2968 aaPredicted RBP7.36□□□□□ -1.23
ERCC3-204ENST00000456257 PLXNA2O75051 1894 aa7.36□□□□□ -1.23
ERCC3-204ENST00000456257 TCF20Q9UGU0 1960 aaKnown RBP7.35□□□□□ -1.23
ERCC3-204ENST00000456257 PLXNB3Q9ULL4 1909 aa7.35□□□□□ -1.23
ERCC3-204ENST00000456257 NPEPPSL1A6NEC2 478 aa7.35□□□□□ -1.23
ERCC3-204ENST00000456257 CFAP73A6NFT4 308 aa7.35□□□□□ -1.23
ERCC3-204ENST00000456257 IGLON5A6NGN9 336 aa7.35□□□□□ -1.23
ERCC3-204ENST00000456257 CHURC1-FNTBB4DL54 471 aa7.35□□□□□ -1.23
ERCC3-204ENST00000456257 NPIPB8E9PQR5 432 aa7.35□□□□□ -1.23
ERCC3-204ENST00000456257 H3BQ06 376 aaPredicted RBP7.35□□□□□ -1.23
ERCC3-204ENST00000456257 K7ESM1 405 aa7.35□□□□□ -1.23
ERCC3-204ENST00000456257 RAD51BO15315 384 aa7.35□□□□□ -1.23
ERCC3-204ENST00000456257 FFAR2O15552 330 aa7.35□□□□□ -1.23
ERCC3-204ENST00000456257 SYNCRIPO60506 623 aaKnown RBP7.35□□□□□ -1.23
ERCC3-204ENST00000456257 KCNJ13O60928 360 aa7.35□□□□□ -1.23
ERCC3-204ENST00000456257 SUPT7LO94864 414 aa7.35□□□□□ -1.23
ERCC3-204ENST00000456257 ESRRBO95718 433 aa7.35□□□□□ -1.23
ERCC3-204ENST00000456257 EGFP01133 1207 aa7.35□□□□□ -1.23
ERCC3-204ENST00000456257 PRR35P0CG20 571 aa7.35□□□□□ -1.23
ERCC3-204ENST00000456257 SRFP11831 508 aa7.35□□□□□ -1.23
ERCC3-204ENST00000456257 PCSK2P16519 638 aa7.35□□□□□ -1.23
ERCC3-204ENST00000456257 VCLP18206 1134 aa7.35□□□□□ -1.23
ERCC3-204ENST00000456257 MSH3P20585 1137 aa7.35□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms